BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0385.0004.p (337 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KEQ9.1 B3KEQ9_9BACI Glycosidase PH1107-related 607 e-172 B3K5N9.1 B3K5N9_9BACI Glycosidase PH1107-related 498 e-139 A6PP50.1 A6PP50_9BACT Glycosidase, PH1107-related 379 e-103 C0A632.1 C0A632_9BACT Putative uncharacterized protein 366 2e-99 Q6AKE2.1 Q6AKE2_DESPS Putative uncharacterized protein 210 1e-52 >B3KEQ9.1 B3KEQ9_9BACI Glycosidase PH1107-related Length = 337 Score = 607 bits (1565), Expect = e-172, Method: Compositional matrix adjust. Identities = 293/333 (87%), Positives = 305/333 (91%) Query: 1 MSDFTVGPLFSSPVITRHPANPILAPGDVPYGPAMVFNAGVTKFKGKYVMVFRNDYGDEA 60 M D VGPLFSSP++TRH ANPIL PGDVPYGPAMVFNAGV KFKGKYVMVFRNDYGDE Sbjct: 1 MRDSIVGPLFSSPIMTRHSANPILTPGDVPYGPAMVFNAGVAKFKGKYVMVFRNDYGDEL 60 Query: 61 KGIVAPFHTTNLGLAFSDDGIKWEVQPEPCWSWHDEEVIRVYDPRLTVIGGQCYMCFAVD 120 KGIVAP HTTNLGLAFSDDGIKW+VQP+PCWSWHDEEVIRVYDPRLTVIG QCYMCFAVD Sbjct: 61 KGIVAPHHTTNLGLAFSDDGIKWDVQPKPCWSWHDEEVIRVYDPRLTVIGEQCYMCFAVD 120 Query: 121 TKHGLRGGIAVTEDFRSFEVLSLSLPDNRNMVLFPELIGGKYVRLERPLPVYSRGGIDRF 180 TKHGLRGGIAVTEDFRSFEVLSLSLPDNRNMVLFPE IGGKYVRLERP+PVYSRGGIDRF Sbjct: 121 TKHGLRGGIAVTEDFRSFEVLSLSLPDNRNMVLFPERIGGKYVRLERPMPVYSRGGIDRF 180 Query: 181 DMWMSDSPDLKYWGNSRLLLTVEEVAYANDKVGPGAPPVKTDKGWLTLFHAVDLDRSRGK 240 DMWMSDSPDLKYWGNS+LLL VE+VAYANDKVGPGAPPVKTDKGWLTLFHAVD+D SRGK Sbjct: 181 DMWMSDSPDLKYWGNSKLLLAVEDVAYANDKVGPGAPPVKTDKGWLTLFHAVDIDPSRGK 240 Query: 241 NGWEDSWKKRYTTGIMLLDLHDPGRVIGRXXXXXXXXXXXYETSGGFRNDVIFPGGMILE 300 NGWEDSWKKRYTTGI+LLDL DP R+IGR YET GGFRN VIFPGGMILE Sbjct: 241 NGWEDSWKKRYTTGILLLDLADPSRIIGRAETPLLAPEADYETDGGFRNHVIFPGGMILE 300 Query: 301 DSGEVKIYYGAADTVECLATAHVDDLLRLCLEG 333 D+GEVKIYYGAADTVECLATAHVDDLL LCL+G Sbjct: 301 DTGEVKIYYGAADTVECLATAHVDDLLHLCLKG 333 >B3K5N9.1 B3K5N9_9BACI Glycosidase PH1107-related Length = 333 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 234/332 (70%), Positives = 271/332 (81%) Query: 1 MSDFTVGPLFSSPVITRHPANPILAPGDVPYGPAMVFNAGVTKFKGKYVMVFRNDYGDEA 60 M+ +G L SS VI RHP NPIL VPY A+VFNAGVTKF GKYVMVFRNDYG Sbjct: 1 MNSLHIGNLISSSVIRRHPDNPILDASRVPYPTALVFNAGVTKFNGKYVMVFRNDYGSVE 60 Query: 61 KGIVAPFHTTNLGLAFSDDGIKWEVQPEPCWSWHDEEVIRVYDPRLTVIGGQCYMCFAVD 120 + + P HTT+LG+AFSDDG+ WEVQP+PC+ HD+E+IR YDPRLTVI G+CYMCFAVD Sbjct: 61 RRTLEPHHTTDLGVAFSDDGVHWEVQPKPCFKLHDQEIIRAYDPRLTVIDGRCYMCFAVD 120 Query: 121 TKHGLRGGIAVTEDFRSFEVLSLSLPDNRNMVLFPELIGGKYVRLERPLPVYSRGGIDRF 180 T+HG+RGG+AVT+DF SFE+LSLS PD RNMVLFPE IGG YVRLERP VYSRGG+DRF Sbjct: 121 TQHGIRGGVAVTDDFVSFEILSLSTPDLRNMVLFPEKIGGNYVRLERPFTVYSRGGVDRF 180 Query: 181 DMWMSDSPDLKYWGNSRLLLTVEEVAYANDKVGPGAPPVKTDKGWLTLFHAVDLDRSRGK 240 DMW+S+SPDLKYWGNS LLL VE+VA+ANDK+GP APP+KT GWLT FHAVDLD +RGK Sbjct: 181 DMWISESPDLKYWGNSGLLLAVEDVAFANDKIGPAAPPIKTKFGWLTSFHAVDLDPARGK 240 Query: 241 NGWEDSWKKRYTTGIMLLDLHDPGRVIGRXXXXXXXXXXXYETSGGFRNDVIFPGGMILE 300 NGWE SWKKRYT G+M+LDL +P ++IG YET GGFRN+VIFPGGMILE Sbjct: 241 NGWEPSWKKRYTAGLMMLDLDNPKKIIGMYKEPLLTPEVSYETEGGFRNNVIFPGGMILE 300 Query: 301 DSGEVKIYYGAADTVECLATAHVDDLLRLCLE 332 + GEVKIYYGAAD VECLATAH+D+L++LCL Sbjct: 301 EDGEVKIYYGAADAVECLATAHIDELIQLCLN 332 >A6PP50.1 A6PP50_9BACT Glycosidase, PH1107-related Length = 331 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 194/328 (59%), Positives = 231/328 (70%), Gaps = 16/328 (4%) Query: 14 VITRHPANPILAPGDVPYGPAMVFNAGVTKFKGKYVMVFRNDYGDEAKGIVAPFHTTNLG 73 + RHP+NP+L+ D+P+ +++FNAGV KF G+YVMVFRND G G + TNLG Sbjct: 2 ALVRHPSNPVLSAKDIPFDASLIFNAGVCKFNGRYVMVFRNDVGFGPNGYGKTY--TNLG 59 Query: 74 LAFSDDGIKWEVQPEPCWS------WHDEEVIRVYDPRLTVIGGQCYMCFAVDTKHGLRG 127 +A+S DG+KWEVQP P W D E+ R YDPRLTVI G+CY+CFAVDT HG+RG Sbjct: 60 IAYSSDGVKWEVQPRP-WKVAADIVAADPELSRFYDPRLTVIDGRCYLCFAVDTMHGVRG 118 Query: 128 GIAVTEDFRSFEVLSLSLPDNRNMVLFPELIGGKYVRLERPLPVYSRGGIDRFDMWMSDS 187 GIAVT+DF FEVLS+S PDNRNMVLFPE GK+VRLERP P YSRG ++FD+W S S Sbjct: 119 GIAVTDDFDHFEVLSMSAPDNRNMVLFPEKFDGKFVRLERPFPEYSRGYQEKFDIWSSMS 178 Query: 188 PDLKYWGNSRLLLTVEEVAYANDKVGPGAPPVKTDKGWLTLFHAVDLDRSRGKNGWED-- 245 PD +YWG++RL+L +E+V YAN K+GP APP+KT KGWL FHA D SR GWE+ Sbjct: 179 PDCRYWGDTRLVLGMEDVPYANAKIGPAAPPIKTPKGWLCTFHATYKDMSRNLFGWENAN 238 Query: 246 ----SWKKRYTTGIMLLDLHDPGRVIGRXXXXXXXXXXXYETSGGFRNDVIFPGGMILED 301 +W K Y G+MLL L DP +VIG YE GFR VIFPGGM+LED Sbjct: 239 NPDVTWNKEYFGGLMLLALDDPQKVIGLAPEPLLKATEKYELE-GFRGSVIFPGGMLLED 297 Query: 302 SGEVKIYYGAADTVECLATAHVDDLLRL 329 GEVKIYYG ADTVECLATA VDDLL L Sbjct: 298 DGEVKIYYGGADTVECLATASVDDLLAL 325 >C0A632.1 C0A632_9BACT Putative uncharacterized protein Length = 377 Score = 366 bits (939), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 189/345 (54%), Positives = 231/345 (66%), Gaps = 20/345 (5%) Query: 3 DFTVGPLFSSPVITRHPANPILAPGDVPYGPAMVFNAGVTKFKGKYVMVFRNDYGDEAKG 62 F LFS ++TRHPANP+L D P+ VFNAGV K++G+YVM+FRNDYG G Sbjct: 17 QFCFPVLFSDAMLTRHPANPVLKHTDCPFKATTVFNAGVAKYQGRYVMLFRNDYG--TWG 74 Query: 63 IVAPFHTTNLGLAFSDDGIKWEVQPEPCWS----------------WHDEEVIRVYDPRL 106 PF TNLGLA+SDDGIKW V EP + + +E+ RVYDPR+ Sbjct: 75 QPPPFEGTNLGLAWSDDGIKWTVTKEPVFDEERARVALAGLYNVKRFGPQEIRRVYDPRI 134 Query: 107 TVIGGQCYMCFAVDTKHGLRGGIAVTEDFRSFEVLSLSLPDNRNMVLFPELIGGKYVRLE 166 TV+ G+ +CFAVDT HG+ GG+A TEDF SF+ LSLS PDNRNMV+FPE IGG+YVRLE Sbjct: 135 TVVDGRLILCFAVDTAHGVLGGVATTEDFSSFKFLSLSTPDNRNMVVFPEKIGGEYVRLE 194 Query: 167 RPLPVYSRGGIDRFDMWMSDSPDLKYWGNSRLLLTVEEVAYANDKVGPGAPPVKTDKGWL 226 RP P+Y RG + F++W S SPDL YWG++RL+L EEV +AN K+GP APPV+T GWL Sbjct: 195 RPFPIYGRGKPEAFEIWASRSPDLCYWGDTRLVLGSEEVPFANSKIGPAAPPVRTRAGWL 254 Query: 227 TLFHAVDLDRSRGKNGWEDS-WKKRYTTGIMLLDLHDPGRVIGRXXXXXXXXXXXYETSG 285 T H+V D GWE S W KRY G+MLLDL DP +VIG YE Sbjct: 255 TPIHSVFKDELHPLKGWEKSPWIKRYDAGLMLLDLEDPTKVIGLCRKPLLTPEADYELD- 313 Query: 286 GFRNDVIFPGGMILEDSGEVKIYYGAADTVECLATAHVDDLLRLC 330 GFR VIFP G+ILED+GE ++YYGAADTV +A+AHVDDL+ C Sbjct: 314 GFRGSVIFPCGLILEDNGEARLYYGAADTVVAMASAHVDDLIAAC 358 >Q6AKE2.1 Q6AKE2_DESPS Putative uncharacterized protein Length = 309 Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 123/330 (37%), Positives = 185/330 (56%), Gaps = 40/330 (12%) Query: 14 VITRHPANPILAPGDVPYGPAMVFNAGVTKFKGKYVMVFRNDYGDEAKGIVAPFHTTN-- 71 +I R+ NPIL+ DVPY A V NAGVTKF KY+M+FR+ H T+ Sbjct: 3 IIHRYEKNPILSKDDVPYPVATVHNAGVTKFNDKYIMIFRS-------------HLTSGR 49 Query: 72 --LGLAFSDDGIKWEVQPEPCWSWHDEEVIRVY------DPRLTVIGGQCYMCFAVDTKH 123 LGLA SDDG +++V +P + E + ++Y DPR+T I + + ++ +++ Sbjct: 50 SILGLAVSDDGFRFKVSDKPFMTPAKEGLFQIYEEYGLEDPRITCIDDEYLITYSAYSRY 109 Query: 124 GLRGGIAVTEDFRSFEVLSL-SLPDNRNMVLFPELIGGKYVRLERPLPVYSRGGIDRFDM 182 G+R +A T DF++ + ++L + D RN+V+FPE I G YVR++RP I + + Sbjct: 110 GVRIALAKTRDFKTIQRVALITEADYRNLVIFPEKIDGMYVRMDRP-----HSEISPWSI 164 Query: 183 WMSDSPDLKYWGNSRLLLTVEEVAYANDKVGPGAPPVKTDKGWLTLFHAVDLDRSRGKNG 242 W+S SPDLKYWG++++++ + K+GPGAPP+KTD+GWL ++H Sbjct: 165 WISYSPDLKYWGDAKVIMKPAAYHWDEMKIGPGAPPIKTDQGWLNIYHG----------A 214 Query: 243 WEDSWKKRYTTGIMLLDLHDPGRVIGRXXXXXXXXXXXYETSGGFRNDVIFPGGMILEDS 302 ++ Y G+ L DL DP ++ G YE G N V+F G + E Sbjct: 215 FQTMAGCVYRLGVALHDLADPSKIRGVSDDWILEPETEYERIGYVPN-VVFTCGAVPEPD 273 Query: 303 GEVKIYYGAADTVECLATAHVDDLLRLCLE 332 G +KIY+GAADTV C TA + DL+ LCL+ Sbjct: 274 GTLKIYWGAADTVMCAGTASIKDLVNLCLQ 303 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.142 0.454 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,316,889,842 Number of extensions: 104455142 Number of successful extensions: 166255 Number of sequences better than 1.0e-05: 263 Number of HSP's gapped: 165321 Number of HSP's successfully gapped: 265 Length of query: 337 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 201 Effective length of database: 1,779,438,163 Effective search space: 357667070763 Effective search space used: 357667070763 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)