BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0383.0019.p (189 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KEP9.1 B3KEP9_9BACI Putative uncharacterized protein 332 7e-90 C2U623.1 C2U623_BACCE Putative uncharacterized protein 306 5e-82 B7HEC4.1 B7HEC4_BACC4 Putative uncharacterized protein 287 3e-76 C3BUJ8.1 C3BUJ8_9BACI Putative uncharacterized protein 287 4e-76 C3BD49.1 C3BD49_BACMY Putative uncharacterized protein 286 7e-76 >B3KEP9.1 B3KEP9_9BACI Putative uncharacterized protein Length = 189 Score = 332 bits (852), Expect = 7e-90, Method: Compositional matrix adjust. Identities = 156/189 (82%), Positives = 175/189 (92%) Query: 1 MEIENLIPVKSREDLRNWLQDNGKTEKCCWVLVSLTPIPDVLLYLDAVEEALCFGWVDGV 60 M+IE++IP KSREDLR WLQ++GKTEK CWV+VS+TP PD+LLYLD VEEALCFGW+DG+ Sbjct: 1 MKIEHVIPAKSREDLRIWLQNHGKTEKSCWVMVSMTPTPDMLLYLDVVEEALCFGWIDGI 60 Query: 61 KKKISETELAQRLSPRSKKSSWTELNKERVRRLEKLGFMRDEGRRVLPDMDHHSFTIDKD 120 KKK+SETELAQRLSPR KKSSWTELNKERVRRLEKLGFM DEGRRVLPDMD SF ID Sbjct: 61 KKKMSETELAQRLSPRGKKSSWTELNKERVRRLEKLGFMSDEGRRVLPDMDPGSFRIDGV 120 Query: 121 IEQRLKEEKQVYENFMAFPDLYQRVRIDTIQSYRNQPEVYKNRLDKFITNTRANKMYGQW 180 IEQRLKEEKQV+ENFMAFPDLY+RVRIDTIQSY+NQPE++K+RLDKFI+NTR NKMYGQW Sbjct: 121 IEQRLKEEKQVFENFMAFPDLYKRVRIDTIQSYKNQPELFKSRLDKFISNTRENKMYGQW 180 Query: 181 NDYGRLLNY 189 ND+GRLL Y Sbjct: 181 NDHGRLLEY 189 >C2U623.1 C2U623_BACCE Putative uncharacterized protein Length = 189 Score = 306 bits (785), Expect = 5e-82, Method: Compositional matrix adjust. Identities = 146/189 (77%), Positives = 168/189 (88%) Query: 1 MEIENLIPVKSREDLRNWLQDNGKTEKCCWVLVSLTPIPDVLLYLDAVEEALCFGWVDGV 60 MEIENLIP+ SR+DLR WLQ+N TEK CWV+VS+ P PD LLYLDAVEE+LCFGW+DGV Sbjct: 1 MEIENLIPINSRDDLRVWLQENCTTEKFCWVVVSMKPTPDTLLYLDAVEESLCFGWIDGV 60 Query: 61 KKKISETELAQRLSPRSKKSSWTELNKERVRRLEKLGFMRDEGRRVLPDMDHHSFTIDKD 120 KKKISET+LAQRLSPRSKKSSWTELNKERVRRLEKL MRDEGRRVLPDMD+ S ID+ Sbjct: 61 KKKISETQLAQRLSPRSKKSSWTELNKERVRRLEKLELMRDEGRRVLPDMDYDSIKIDRV 120 Query: 121 IEQRLKEEKQVYENFMAFPDLYQRVRIDTIQSYRNQPEVYKNRLDKFITNTRANKMYGQW 180 IE+RLKE+ QVY NF+ FP LY+R+RIDTIQS +NQPE++K+RLDKFITNT+ NKMYGQW Sbjct: 121 IEERLKEDGQVYGNFLEFPALYKRIRIDTIQSNKNQPELFKSRLDKFITNTKRNKMYGQW 180 Query: 181 NDYGRLLNY 189 +D GRLL+Y Sbjct: 181 HDNGRLLDY 189 >B7HEC4.1 B7HEC4_BACC4 Putative uncharacterized protein Length = 189 Score = 287 bits (735), Expect = 3e-76, Method: Compositional matrix adjust. Identities = 136/189 (71%), Positives = 159/189 (84%) Query: 1 MEIENLIPVKSREDLRNWLQDNGKTEKCCWVLVSLTPIPDVLLYLDAVEEALCFGWVDGV 60 MEIENL+ VK+R +LRNWL++N KTE+ CWV+VS+ +V+ YLDAVEEALCFGW+DG+ Sbjct: 1 MEIENLLRVKTRGELRNWLEENSKTERFCWVIVSMKEQSEVIQYLDAVEEALCFGWIDGI 60 Query: 61 KKKISETELAQRLSPRSKKSSWTELNKERVRRLEKLGFMRDEGRRVLPDMDHHSFTIDKD 120 KKK S TELAQRLSPR K S+WTELNKERVRRL KLG M++EG RVLPDM SFTID D Sbjct: 61 KKKTSNTELAQRLSPRKKNSNWTELNKERVRRLYKLGLMKEEGLRVLPDMRPESFTIDMD 120 Query: 121 IEQRLKEEKQVYENFMAFPDLYQRVRIDTIQSYRNQPEVYKNRLDKFITNTRANKMYGQW 180 IE RLKE+ Q+YENF+ FPDLY+R+RIDTIQSYRN+P ++ RLDKFI NTR NKMYGQW Sbjct: 121 IETRLKEDDQLYENFINFPDLYRRIRIDTIQSYRNEPNIFNKRLDKFIENTRENKMYGQW 180 Query: 181 NDYGRLLNY 189 ND GRL NY Sbjct: 181 NDNGRLTNY 189 >C3BUJ8.1 C3BUJ8_9BACI Putative uncharacterized protein Length = 189 Score = 287 bits (734), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 135/189 (71%), Positives = 162/189 (85%) Query: 1 MEIENLIPVKSREDLRNWLQDNGKTEKCCWVLVSLTPIPDVLLYLDAVEEALCFGWVDGV 60 MEIENL+ VK+R LR+WL++N KTE+ CWV+VS+T +V+ YLDAVEEALCFGW+DG+ Sbjct: 1 MEIENLLRVKTRWKLRDWLEENSKTERFCWVIVSITEQSEVIQYLDAVEEALCFGWIDGI 60 Query: 61 KKKISETELAQRLSPRSKKSSWTELNKERVRRLEKLGFMRDEGRRVLPDMDHHSFTIDKD 120 KKKIS+TELAQRLSPR K S+WTELNKERVRRL +LG M++EG RVLPDM SFTID D Sbjct: 61 KKKISDTELAQRLSPRKKNSNWTELNKERVRRLYQLGLMKEEGLRVLPDMRPESFTIDAD 120 Query: 121 IEQRLKEEKQVYENFMAFPDLYQRVRIDTIQSYRNQPEVYKNRLDKFITNTRANKMYGQW 180 IE RLKE+ Q+Y+NF+ FPDLY+R+RIDTIQSYRN+P ++ RLDKFI NTR NKMYGQW Sbjct: 121 IETRLKEDDQLYQNFINFPDLYRRIRIDTIQSYRNEPNIFNKRLDKFIENTRENKMYGQW 180 Query: 181 NDYGRLLNY 189 ND GRL+NY Sbjct: 181 NDNGRLINY 189 >C3BD49.1 C3BD49_BACMY Putative uncharacterized protein Length = 189 Score = 286 bits (731), Expect = 7e-76, Method: Compositional matrix adjust. Identities = 135/189 (71%), Positives = 161/189 (85%) Query: 1 MEIENLIPVKSREDLRNWLQDNGKTEKCCWVLVSLTPIPDVLLYLDAVEEALCFGWVDGV 60 MEIENL+ V +R +LR+WL++N KTEK CWV+VS+T +V+ YLDAVEEALCFGW+DG+ Sbjct: 1 MEIENLLRVTTRWELRDWLEENSKTEKFCWVIVSITEQSEVIQYLDAVEEALCFGWIDGI 60 Query: 61 KKKISETELAQRLSPRSKKSSWTELNKERVRRLEKLGFMRDEGRRVLPDMDHHSFTIDKD 120 KKKIS+TELAQRLSPR K S+WTELNKERVRRL +LG M++EG RVLPDM SFTID D Sbjct: 61 KKKISDTELAQRLSPRKKNSNWTELNKERVRRLYQLGLMKEEGLRVLPDMRPESFTIDAD 120 Query: 121 IEQRLKEEKQVYENFMAFPDLYQRVRIDTIQSYRNQPEVYKNRLDKFITNTRANKMYGQW 180 IE RLKE+ Q+Y+NF+ FPDLY+R+RIDTIQSYRN P ++ RLDKFI NTR NKMYGQW Sbjct: 121 IETRLKEDDQLYQNFINFPDLYRRIRIDTIQSYRNDPNIFNKRLDKFIENTRENKMYGQW 180 Query: 181 NDYGRLLNY 189 ND GRL+NY Sbjct: 181 NDNGRLINY 189 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.414 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,135,265,583 Number of extensions: 44561216 Number of successful extensions: 168763 Number of sequences better than 1.0e-05: 156 Number of HSP's gapped: 168678 Number of HSP's successfully gapped: 156 Length of query: 189 Length of database: 3,060,696,203 Length adjustment: 128 Effective length of query: 61 Effective length of database: 1,854,806,283 Effective search space: 113143183263 Effective search space used: 113143183263 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)