BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0383.0011.p
         (395 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6TU54.1 A6TU54_ALKMQ Uncharacterized conserved protein, repeat-...   133   3e-29
B9DXU4.1 B9DXU4_CLOK1 Putative uncharacterized protein                132   7e-29
A5N476.1 A5N476_CLOK5 Putative uncharacterized protein                132   7e-29
C1FUV6.1 C1FUV6_CLOBJ Putative uncharacterized protein                126   3e-27
B1Q703.1 B1Q703_CLOBO Putative uncharacterized protein                126   3e-27

>A6TU54.1 A6TU54_ALKMQ Uncharacterized conserved protein, repeat-containing
           protein
          Length = 158

 Score =  133 bits (335), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 61/113 (53%), Positives = 94/113 (83%)

Query: 271 QLDVSKNKVQTGEVNVRKEIVEEQKTINVPVSHEEIVIERRSVNHDSTAEPVGAGETIRI 330
           +LD+SKN+VQ GEV + KEIVEEQK ++VPVSHEE++IER S+N++S+  P+   ETI I
Sbjct: 36  ELDISKNRVQVGEVELSKEIVEEQKIVDVPVSHEEVIIERHSINNESSDSPITDEETIHI 95

Query: 331 PVSEEQVEVNKNTVVTGEVDVHKREIQETEQVKDTVKREEARVDKTGNVKVNN 383
           P+SE+QV+V+K+TV+TGE++ HKR++++T  ++ T+K+E+A V+K GN K+ +
Sbjct: 96  PISEDQVQVDKHTVITGEIEAHKRQVEDTRHIEATLKKEDAHVNKEGNAKIKD 148


>B9DXU4.1 B9DXU4_CLOK1 Putative uncharacterized protein
          Length = 152

 Score =  132 bits (332), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 91/111 (81%)

Query: 271 QLDVSKNKVQTGEVNVRKEIVEEQKTINVPVSHEEIVIERRSVNHDSTAEPVGAGETIRI 330
           +LD++KNK++ GEV + KEIVEEQKT++VPV+HEE+VIERR+V++ ++  P+   ETIRI
Sbjct: 32  ELDINKNKIRKGEVELSKEIVEEQKTVDVPVTHEEVVIERRAVDNQTSDTPIDDKETIRI 91

Query: 331 PVSEEQVEVNKNTVVTGEVDVHKREIQETEQVKDTVKREEARVDKTGNVKV 381
           PVSEEQV V+K+TVVTGEV  HKRE+ ET +V + +KREEAR++  GN  +
Sbjct: 92  PVSEEQVNVDKHTVVTGEVSAHKREVGETRRVDEKLKREEARINTNGNADI 142


>A5N476.1 A5N476_CLOK5 Putative uncharacterized protein
          Length = 149

 Score =  132 bits (332), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 66/111 (59%), Positives = 91/111 (81%)

Query: 271 QLDVSKNKVQTGEVNVRKEIVEEQKTINVPVSHEEIVIERRSVNHDSTAEPVGAGETIRI 330
           +LD++KNK++ GEV + KEIVEEQKT++VPV+HEE+VIERR+V++ ++  P+   ETIRI
Sbjct: 29  ELDINKNKIRKGEVELSKEIVEEQKTVDVPVTHEEVVIERRAVDNQTSDTPIDDKETIRI 88

Query: 331 PVSEEQVEVNKNTVVTGEVDVHKREIQETEQVKDTVKREEARVDKTGNVKV 381
           PVSEEQV V+K+TVVTGEV  HKRE+ ET +V + +KREEAR++  GN  +
Sbjct: 89  PVSEEQVNVDKHTVVTGEVSAHKREVGETRRVDEKLKREEARINTNGNADI 139


>C1FUV6.1 C1FUV6_CLOBJ Putative uncharacterized protein
          Length = 158

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/116 (55%), Positives = 94/116 (81%), Gaps = 2/116 (1%)

Query: 271 QLDVSKNKVQTGEVNVRKEIVEEQKTINVPVSHEEIVIERRSVNHDSTAEPVGAGETIRI 330
           +LD++K+ V  GEV + KEIVEEQKT++VPV+HEE+VIERR+++++++  P+   E+IRI
Sbjct: 38  ELDINKSNVPKGEVELSKEIVEEQKTVDVPVTHEEVVIERRAIDNEASDTPISDEESIRI 97

Query: 331 PVSEEQVEVNKNTVVTGEVDVHKREIQETEQVKDTVKREEARVDKTGNVKV--NNN 384
           PVSEEQV V+K+T+VTGEV  HKRE Q+T +V +++KREEAR++  G+  +  NNN
Sbjct: 98  PVSEEQVNVDKHTLVTGEVSAHKREAQDTRRVDESLKREEARINTHGDANIVDNNN 153


>B1Q703.1 B1Q703_CLOBO Putative uncharacterized protein
          Length = 156

 Score =  126 bits (317), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 64/120 (53%), Positives = 95/120 (79%), Gaps = 3/120 (2%)

Query: 271 QLDVSKNKVQTGEVNVRKEIVEEQKTINVPVSHEEIVIERRSVNHDSTAEPVGAGETIRI 330
           +LD++K+ V  GEV + KEIVEEQKT++VPV+HEE+VIERR+++++++  P+   E+IRI
Sbjct: 36  ELDINKSNVPKGEVELSKEIVEEQKTVDVPVTHEEVVIERRAIDNEASDTPISDEESIRI 95

Query: 331 PVSEEQVEVNKNTVVTGEVDVHKREIQETEQVKDTVKREEARVDKTGNVKV---NNNSGV 387
           PVSEEQV V+K+T+VTGEV  HKRE Q+T +V +++KREEAR++  G+  +   NN+ G 
Sbjct: 96  PVSEEQVNVDKHTLVTGEVSAHKREAQDTRRVDESLKREEARINTHGDANIVDNNNDEGF 155


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.307    0.126    0.337 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,798,615,583
Number of extensions: 68293650
Number of successful extensions: 169889
Number of sequences better than 1.0e-05: 108
Number of HSP's gapped: 169792
Number of HSP's successfully gapped: 109
Length of query: 395
Length of database: 3,060,696,203
Length adjustment: 138
Effective length of query: 257
Effective length of database: 1,760,596,133
Effective search space: 452473206181
Effective search space used: 452473206181
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 132 (55.5 bits)