BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0383.0006.p (231 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0Z4W8.1 C0Z4W8_BREBN Conserved hypothetical membrane protein 247 5e-64 Q2B3K6.1 Q2B3K6_9BACI Divalent heavy-metal cation transporter 239 1e-61 B7GLC6.1 B7GLC6_ANOFW Predicted divalent heavy-metal cations tra... 233 1e-59 C3J322.1 C3J322_9BACI Zinc/iron permease 231 3e-59 B7YDA6.1 B7YDA6_9BACI Zinc/iron permease 231 3e-59 >C0Z4W8.1 C0Z4W8_BREBN Conserved hypothetical membrane protein Length = 243 Score = 247 bits (631), Expect = 5e-64, Method: Compositional matrix adjust. Identities = 120/230 (52%), Positives = 167/230 (72%) Query: 1 MATVLGVVPILFVRRLSELWKDVLVAFTAGIMVSASTFGLMPQAIKESGIIAXXXXXXXX 60 MAT +G +PILF + +S W+D+L+AFTAGIMV+ASTF L+PQA++ + I Sbjct: 13 MATGVGALPILFFKSVSHRWRDILLAFTAGIMVAASTFSLIPQALQSAPFIIVCLGVLTG 72 Query: 61 XXXXXXXENNIPHIDVENKPGFTNMDSKALLVLIALFIHNIPEGLSTGFSYASQQASLGP 120 E+ IPHID+E+ +MDS++LL+L A+ +HNIPEGLS G SY+S+Q+ LG Sbjct: 73 TLMLTVLESIIPHIDLEHTRINISMDSQSLLILAAITLHNIPEGLSVGVSYSSEQSGLGG 132 Query: 121 MVAIAIGAQNMPEGLILAVFLLNSQATRRKALIMAALTGLMEMVSAVIGYFTASYVQNVV 180 +++ AIG QN PEG ++A+FL+N + +R KA ++A LTG +E+VS + GY+ S V +V Sbjct: 133 LISFAIGLQNAPEGFLVALFLINQKVSRFKAFMLATLTGAVEIVSGICGYYLTSVVHGLV 192 Query: 181 GYGLAFAAGAMLFIVYKELIPESHGHGYERPSTYSFIFGLLVMVYITQVY 230 YGL+FAAGAMLFIVYKELIPESHG G+ R +T+SFI GLLVM+ + Q + Sbjct: 193 PYGLSFAAGAMLFIVYKELIPESHGDGHARSATFSFILGLLVMIGLVQSF 242 >Q2B3K6.1 Q2B3K6_9BACI Divalent heavy-metal cation transporter Length = 270 Score = 239 bits (610), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 116/224 (51%), Positives = 161/224 (71%) Query: 1 MATVLGVVPILFVRRLSELWKDVLVAFTAGIMVSASTFGLMPQAIKESGIIAXXXXXXXX 60 MAT G +PILF + ++ W+DVL+A+TAGIM++ASTF L+PQA++ S +I Sbjct: 39 MATGAGAIPILFFKSVTHKWRDVLLAYTAGIMMAASTFSLIPQALESSNMIVLTIGLLLG 98 Query: 61 XXXXXXXENNIPHIDVENKPGFTNMDSKALLVLIALFIHNIPEGLSTGFSYASQQASLGP 120 E + PHID+E+ ++ KA+L++ A+ +HN+PEGLS G SYAS LGP Sbjct: 99 TFVLNFLEKHTPHIDLEHTKLNMKLEQKAVLIVAAITLHNLPEGLSVGVSYASDGGELGP 158 Query: 121 MVAIAIGAQNMPEGLILAVFLLNSQATRRKALIMAALTGLMEMVSAVIGYFTASYVQNVV 180 ++A AIG QN PEG ++A+FL+N +R KAL +A LTG++E+V+A+IGYF + ++ +V Sbjct: 159 LIAFAIGLQNAPEGFLVALFLVNQNISRWKALAVATLTGMVEIVTAIIGYFLSRNIEGLV 218 Query: 181 GYGLAFAAGAMLFIVYKELIPESHGHGYERPSTYSFIFGLLVMV 224 YGL+FAAGAMLFI+YKELIPESHG G ER STYSFI GL+ M+ Sbjct: 219 PYGLSFAAGAMLFIIYKELIPESHGDGNERFSTYSFILGLVTML 262 >B7GLC6.1 B7GLC6_ANOFW Predicted divalent heavy-metal cations transporter Length = 245 Score = 233 bits (593), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 120/232 (51%), Positives = 162/232 (69%), Gaps = 2/232 (0%) Query: 1 MATVLGVVPILFVRR-LSELWKDVLVAFTAGIMVSASTFGLMPQAIKESGIIAXXXXXXX 59 +AT G VPILF+ R L+ +D+L+AFTAG+M++AS GL+PQ++ + Sbjct: 14 LATGAGAVPILFLSRSLTHKRRDMLLAFTAGVMMAASMLGLIPQSLSSGTFFSLAVGLCF 73 Query: 60 XXXXXXXXENNIPHIDVENKPGFTNMDSKALLVLIALFIHNIPEGLSTGFSYAS-QQASL 118 EN IPHID+ + MD KALLVL A+ +HNIPEGLS G SYAS +Q + Sbjct: 74 GVFTLTLLENIIPHIDLAHTKSGMKMDQKALLVLAAITLHNIPEGLSVGVSYASGEQNHI 133 Query: 119 GPMVAIAIGAQNMPEGLILAVFLLNSQATRRKALIMAALTGLMEMVSAVIGYFTASYVQN 178 G ++A+AIG QN PEGL++A+FL N ++ KA +MA TGL+E+V+++IG++ S V Sbjct: 134 GDLIALAIGFQNAPEGLLVALFLFNQHISKGKAFLMATGTGLIELVASIIGFYLTSVVDA 193 Query: 179 VVGYGLAFAAGAMLFIVYKELIPESHGHGYERPSTYSFIFGLLVMVYITQVY 230 +V YGLAFAAGAMLFI+YKELIPESHG G E+ STY+FI GLLVMV++ + Y Sbjct: 194 LVPYGLAFAAGAMLFIIYKELIPESHGDGNEQSSTYAFIIGLLVMVFLIETY 245 >C3J322.1 C3J322_9BACI Zinc/iron permease Length = 244 Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 113/232 (48%), Positives = 164/232 (70%), Gaps = 2/232 (0%) Query: 1 MATVLGVVPILFV-RRLSELWKDVLVAFTAGIMVSASTFGLMPQAIKESGIIAXXXXXXX 59 ++T LG VPILF+ + L+ W+DVL+AF+AGIM++AS L+P+A++ G A Sbjct: 13 LSTGLGAVPILFMAKSLTHRWRDVLLAFSAGIMMAASMMSLIPEALRSGGFWALVIGLAA 72 Query: 60 XXXXXXXXENNIPHIDVENKPGFTNMDSKALLVLIALFIHNIPEGLSTGFSYASQQAS-L 118 E +PHID+E+ D KA+L++ A+ +HN+PEGLS G SYAS +S + Sbjct: 73 GVFVLTLLERTVPHIDLEHTKSGLQFDEKAMLIIAAIALHNLPEGLSVGVSYASDSSSQI 132 Query: 119 GPMVAIAIGAQNMPEGLILAVFLLNSQATRRKALIMAALTGLMEMVSAVIGYFTASYVQN 178 G ++A+AIG QN PEG ++A+FL+N Q R KA ++A LTG +E+V++++G++ S + Sbjct: 133 GNLIALAIGLQNAPEGFLVALFLINQQIGRLKAFLIATLTGAVEIVTSLLGFYLTSLFRE 192 Query: 179 VVGYGLAFAAGAMLFIVYKELIPESHGHGYERPSTYSFIFGLLVMVYITQVY 230 +V YGLAFAAGAMLFI+YKELIPESHG G ER STY+FI G+L M+++TQ + Sbjct: 193 LVPYGLAFAAGAMLFIIYKELIPESHGDGNERTSTYAFIVGILFMIFLTQSF 244 >B7YDA6.1 B7YDA6_9BACI Zinc/iron permease Length = 244 Score = 231 bits (590), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 113/232 (48%), Positives = 164/232 (70%), Gaps = 2/232 (0%) Query: 1 MATVLGVVPILFV-RRLSELWKDVLVAFTAGIMVSASTFGLMPQAIKESGIIAXXXXXXX 59 ++T LG VPILF+ + L+ W+DVL+AF+AGIM++AS L+P+A++ G A Sbjct: 13 LSTGLGAVPILFMAKSLTHRWRDVLLAFSAGIMMAASMMSLIPEALRSGGFWALVIGLAA 72 Query: 60 XXXXXXXXENNIPHIDVENKPGFTNMDSKALLVLIALFIHNIPEGLSTGFSYASQQAS-L 118 E +PHID+E+ D KA+L++ A+ +HN+PEGLS G SYAS +S + Sbjct: 73 GVFVLTLLERTVPHIDLEHTKSGLQFDEKAMLIIAAIALHNLPEGLSVGVSYASDSSSQI 132 Query: 119 GPMVAIAIGAQNMPEGLILAVFLLNSQATRRKALIMAALTGLMEMVSAVIGYFTASYVQN 178 G ++A+AIG QN PEG ++A+FL+N Q R KA ++A LTG +E+V++++G++ S + Sbjct: 133 GNLIALAIGLQNAPEGFLVALFLINQQIGRLKAFLIATLTGAVEIVTSLLGFYLTSLFRE 192 Query: 179 VVGYGLAFAAGAMLFIVYKELIPESHGHGYERPSTYSFIFGLLVMVYITQVY 230 +V YGLAFAAGAMLFI+YKELIPESHG G ER STY+FI G+L M+++TQ + Sbjct: 193 LVPYGLAFAAGAMLFIIYKELIPESHGDGNERTSTYAFIVGILFMIFLTQSF 244 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.325 0.138 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,180,473,126 Number of extensions: 42950444 Number of successful extensions: 146821 Number of sequences better than 1.0e-05: 730 Number of HSP's gapped: 145407 Number of HSP's successfully gapped: 730 Length of query: 231 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 100 Effective length of database: 1,826,543,238 Effective search space: 182654323800 Effective search space used: 182654323800 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 129 (54.3 bits)