BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0383.0003.p
         (124 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1DA12.1 B1DA12_9BACL Putative uncharacterized protein                177   3e-43
A9B305.1 A9B305_HERA2 Putative uncharacterized protein                167   3e-40
A9GHE0.1 A9GHE0_SORC5 Putative uncharacterized protein                152   9e-36
A9DAJ4.1 A9DAJ4_9RHIZ Putative uncharacterized protein                151   2e-35
A9DPJ7.1 A9DPJ7_9FLAO Putative uncharacterized protein                139   6e-32

>B1DA12.1 B1DA12_9BACL Putative uncharacterized protein
          Length = 120

 Score =  177 bits (449), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 87/119 (73%), Positives = 100/119 (84%)

Query: 3   MMILSTILVALVALEHVYILILEMFMWATPRAQKAFGTTSQFAKETKSLAANQGLYNGFL 62
           M+I+S IL A+VA+EHVYILILEMF+W  PRA+KAFGT   FA+ TKSLAANQGLYNGFL
Sbjct: 1   MLIVSVILTAIVAIEHVYILILEMFLWTGPRARKAFGTDKAFAEATKSLAANQGLYNGFL 60

Query: 63  AAGLIWGLFHPNDTFGFQLQLFFLICVGVAAVYGSITAKKSILFVQGLPAFAAILAVVL 121
           AAGL WGL HPN + G Q+QLFFLICV VAAVYG  TAK+SIL VQGLPA  A++AV+L
Sbjct: 61  AAGLFWGLVHPNASTGHQIQLFFLICVLVAAVYGGFTAKRSILLVQGLPALIALIAVLL 119


>A9B305.1 A9B305_HERA2 Putative uncharacterized protein
          Length = 123

 Score =  167 bits (423), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 78/119 (65%), Positives = 99/119 (83%)

Query: 3   MMILSTILVALVALEHVYILILEMFMWATPRAQKAFGTTSQFAKETKSLAANQGLYNGFL 62
           M I+S ILV LVA+EH+YIL LEMF W  PR  K+FG T +FA+++KSLAANQGLYNGFL
Sbjct: 1   MAIVSLILVGLVAVEHIYILYLEMFAWTQPRTMKSFGLTPEFAQQSKSLAANQGLYNGFL 60

Query: 63  AAGLIWGLFHPNDTFGFQLQLFFLICVGVAAVYGSITAKKSILFVQGLPAFAAILAVVL 121
           AAGLIWGL HP+  FG Q+QLFF++CV VAA+YG +TAK+SILF+QG PA  A++A+++
Sbjct: 61  AAGLIWGLVHPDAEFGLQIQLFFVLCVVVAAIYGGLTAKRSILFIQGGPAIVALVALLI 119


>A9GHE0.1 A9GHE0_SORC5 Putative uncharacterized protein
          Length = 125

 Score =  152 bits (384), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 74/121 (61%), Positives = 92/121 (76%)

Query: 3   MMILSTILVALVALEHVYILILEMFMWATPRAQKAFGTTSQFAKETKSLAANQGLYNGFL 62
           M I S I+V L+ + H+YILILEMF+W + RA KAFGTT + A  T  LAANQGLYNGFL
Sbjct: 1   MQIASRIVVTLIGVLHIYILILEMFLWRSERAYKAFGTTPEVAAITAPLAANQGLYNGFL 60

Query: 63  AAGLIWGLFHPNDTFGFQLQLFFLICVGVAAVYGSITAKKSILFVQGLPAFAAILAVVLA 122
           AAGL+WG+ HPN  F +Q+Q FFL+CV VA VYG+ TAK+SILFVQ +P+   +  V+LA
Sbjct: 61  AAGLLWGVIHPNRAFAWQIQTFFLLCVAVAGVYGAATAKRSILFVQTVPSAIGLALVLLA 120

Query: 123 N 123
           N
Sbjct: 121 N 121


>A9DAJ4.1 A9DAJ4_9RHIZ Putative uncharacterized protein
          Length = 121

 Score =  151 bits (381), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 72/121 (59%), Positives = 91/121 (75%)

Query: 3   MMILSTILVALVALEHVYILILEMFMWATPRAQKAFGTTSQFAKETKSLAANQGLYNGFL 62
           M +L+ ILVALVALEH+ IL+LEMF+W +PR  +AF  + + A+ TK +AANQGLYNGFL
Sbjct: 1   MAVLALILVALVALEHITILVLEMFLWTSPRGMRAFNLSREQAESTKVMAANQGLYNGFL 60

Query: 63  AAGLIWGLFHPNDTFGFQLQLFFLICVGVAAVYGSITAKKSILFVQGLPAFAAILAVVLA 122
           AAGLIW L HP+    FQL+LFFL CV VA +YG  TA + ILF+Q LPA  A++AV+ A
Sbjct: 61  AAGLIWALIHPDAAVAFQLKLFFLACVVVAGLYGGATASRKILFIQALPAALAMIAVIAA 120

Query: 123 N 123
            
Sbjct: 121 R 121


>A9DPJ7.1 A9DPJ7_9FLAO Putative uncharacterized protein
          Length = 122

 Score =  139 bits (351), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 78/123 (63%), Positives = 93/123 (75%), Gaps = 7/123 (5%)

Query: 3   MMILSTILVALVALEHVYILILEMFMWATPRAQKAFGTTS-QFAKETKSLAANQGLYNGF 61
           M IL TIL+ALVA+EHVYIL LEMF+W  P+  K FG  S +FA+ETK+LAANQGLYNGF
Sbjct: 1   MKILQTILIALVAIEHVYILYLEMFLWTKPKGMKTFGLKSKEFAEETKTLAANQGLYNGF 60

Query: 62  LAAGLIWGLFHPNDTFGFQLQLFFLICVGVAAVYGSITAK-KSILFVQGLPAFAAILAVV 120
           LAAGL W L+   DT    + LFF+ICV VAA+YG+ + K K IL VQG+PAF A LAV+
Sbjct: 61  LAAGLFWSLY-TEDT---DVSLFFIICVCVAALYGAYSTKSKRILIVQGIPAFLA-LAVM 115

Query: 121 LAN 123
           L N
Sbjct: 116 LFN 118


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.331    0.140    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 643,092,282
Number of extensions: 22667508
Number of successful extensions: 70825
Number of sequences better than 1.0e-05: 316
Number of HSP's gapped: 70455
Number of HSP's successfully gapped: 316
Length of query: 124
Length of database: 3,060,696,203
Length adjustment: 90
Effective length of query: 34
Effective length of database: 2,212,804,853
Effective search space: 75235365002
Effective search space used: 75235365002
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 125 (52.8 bits)