BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0382.0027.p (226 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3HA43.1 C3HA43_BACTU FAD dependent oxidoreductase 325 2e-87 B2JWJ6.1 B2JWJ6_BURP8 FAD dependent oxidoreductase 144 5e-33 Q3Z8B0.1 Q3Z8B0_DEHE1 Phytoene dehydrogenase family 142 2e-32 A5FR60.1 A5FR60_DEHSB Phytoene dehydrogenase and related protein... 139 2e-31 A8CP73.1 A8CP73_9CHLR FAD dependent oxidoreductase 138 4e-31 >C3HA43.1 C3HA43_BACTU FAD dependent oxidoreductase Length = 517 Score = 325 bits (832), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 147/217 (67%), Positives = 186/217 (85%) Query: 1 MLEGKYADDDLKYCYENFSTKAAQIYVGLGISRTFDDMPHYMSLELEQPLRANGDSKADN 60 MLEGKY ++DLKYCY+NF T A QIYVGLG+S+ F+++PHYM LELE+PL +G +N Sbjct: 294 MLEGKYVNEDLKYCYDNFKTSAPQIYVGLGVSKAFENVPHYMCLELERPLNDHGCKDVNN 353 Query: 61 LFVKIFNKHPGFAPKGKTSVVVYAKTSNGYWENLKETDPRQYDEQKKAVADEIIDLLEAR 120 +FVKI+NK+P FAPKGKTS+VVYAKTS+ YWE L++ + +Y+++KKA+A+EIIDLL+ R Sbjct: 354 IFVKIYNKNPSFAPKGKTSIVVYAKTSSEYWEALQKNNRVKYEKEKKAIANEIIDLLDKR 413 Query: 121 LGKIRENIEVVDVSTPHTIKRYTNNRNGSWMGWEKQMDNIMQEKKLKRSLPGLANFYMIG 180 G I+ NI+VVDVSTP+TI+RYTNNRNGSW GWEKQM I+ EKKLKR+L GL +FYM+G Sbjct: 414 FGDIKSNIDVVDVSTPYTIRRYTNNRNGSWQGWEKQMAAIIHEKKLKRTLHGLEDFYMVG 473 Query: 181 HWTQVGGGLPSVVLQARNLVQVLCKENGQVFSTTIGE 217 HW+QVGGGLPSVVLQARNLVQVLCKE+ ++F+T I E Sbjct: 474 HWSQVGGGLPSVVLQARNLVQVLCKEDEKIFNTKIDE 510 >B2JWJ6.1 B2JWJ6_BURP8 FAD dependent oxidoreductase Length = 510 Score = 144 bits (364), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 116/213 (54%), Gaps = 3/213 (1%) Query: 1 MLEGKYADDDLKYCYENFSTKAAQIYVGLGISRTFDDMPHYMSLELEQPLRANGDSKADN 60 +L+G+Y + + Y + + + V LG++R ++ L+ PL + + Sbjct: 284 LLDGRYVGPRMAHLYRTYEPFPSFLQVSLGVARDLSQQCGFVMRLLDLPLIVDPQTTVRQ 343 Query: 61 LFVKIFNKHPGFAPKGKTSVVVYAKTSN-GYWENLKETDPRQYDEQKKAVADEIIDLLEA 119 + ++F+ P AP GKT+V T N YW L E DP+ Y+ +K+ VAD +I L +A Sbjct: 344 IAFRLFHYDPTLAPVGKTAVTCTLPTRNVEYWSWLSEHDPQAYEAEKRRVADSVIALFDA 403 Query: 120 RLGKIRENIEVVDVSTPHTIKRYTNNRNGSWMGWEKQMDNIMQEKKLKRSLPGLANFYMI 179 + +R+ IEVVDVSTP T+ R T N GS GW + + L +LPGL F MI Sbjct: 404 WIPGVRDAIEVVDVSTPATVIRCTRNWRGSMEGWLITPQTGV--RPLPPTLPGLRRFLMI 461 Query: 180 GHWTQVGGGLPSVVLQARNLVQVLCKENGQVFS 212 G W GGGLPS ++ AR V+ +C+++G F+ Sbjct: 462 GQWVMPGGGLPSGLITARRAVRRMCRQDGIAFA 494 >Q3Z8B0.1 Q3Z8B0_DEHE1 Phytoene dehydrogenase family Length = 523 Score = 142 bits (358), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 120/213 (56%), Gaps = 5/213 (2%) Query: 1 MLEGKYADDDLKYCYENFSTKAAQIYVGLGISRTFDDMPHYMSLELEQPLRANGDSKADN 60 +L+GKY L+ ++ G+ RTF++ + ++ L++PLR G+ + Sbjct: 313 LLDGKYIGKKLQNKFDTSELSLPYFVASFGVKRTFENENVFNTIFLKKPLRV-GNREVRQ 371 Query: 61 LFVKIFNKHPGFAPKGKTSVVVYAKTSNGYWENLKETDPRQYDEQKKAVADEIIDLLEAR 120 LF++IFN FAP+GK+ + V +T YW NLK+TD +Y +K+ +A EI+D L+ Sbjct: 372 LFLRIFNYSSHFAPEGKSVIQVEFETEWVYWNNLKQTDLSKYTAEKERLAAEILDNLDML 431 Query: 121 LGKIRENIEVVDVSTPHTIKRYTNNRNGSWMGWEKQMDNIMQEKKLKRSLPGLANFYMIG 180 + + +E+ D++TP T RYT N G+ GW N E +R+L GL+N Y+ G Sbjct: 432 YSGVSQAVEIRDIATPCTFSRYTLNHQGAPEGWGLNALNFKAES--RRTLEGLSNLYLAG 489 Query: 181 HWTQVGGGLPSVVLQARNLVQVLCKENGQVFST 213 HW V GG+P V+L R VQ++C + + F T Sbjct: 490 HW--VSGGVPGVILSGRQAVQLICAKEKKTFFT 520 >A5FR60.1 A5FR60_DEHSB Phytoene dehydrogenase and related protein-like protein Length = 500 Score = 139 bits (350), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 5/213 (2%) Query: 1 MLEGKYADDDLKYCYENFSTKAAQIYVGLGISRTFDDMPHYMSLELEQPLRANGDSKADN 60 +L+GKY L+ ++ G+ RTF++ + +L L+QPL+ G+ + Sbjct: 290 LLDGKYIGKKLQNKFDTCELSRPYFVASFGVKRTFENESVFNTLILKQPLQI-GNREIRQ 348 Query: 61 LFVKIFNKHPGFAPKGKTSVVVYAKTSNGYWENLKETDPRQYDEQKKAVADEIIDLLEAR 120 +FV+IFN FAPK K+ + +T YW+NL++ DP +Y +K+ + EI+ LE Sbjct: 349 IFVRIFNYSNHFAPKDKSVIQAEFETEWDYWDNLRQKDPNKYAAEKERLVSEILANLEIL 408 Query: 121 LGKIRENIEVVDVSTPHTIKRYTNNRNGSWMGWEKQMDNIMQEKKLKRSLPGLANFYMIG 180 I +E+ DV+TP T+ RYT N G+ GW N +E +RSL GL+N Y+ G Sbjct: 409 YPGISPLVEIADVATPCTLNRYTLNHQGAPEGWGLTSQNFKEET--RRSLEGLSNLYLAG 466 Query: 181 HWTQVGGGLPSVVLQARNLVQVLCKENGQVFST 213 HW V GG+P V+L R +Q++C + + F T Sbjct: 467 HW--VSGGVPGVILSGRQAIQLVCAKEKKPFFT 497 >A8CP73.1 A8CP73_9CHLR FAD dependent oxidoreductase Length = 500 Score = 138 bits (347), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 73/213 (34%), Positives = 119/213 (55%), Gaps = 5/213 (2%) Query: 1 MLEGKYADDDLKYCYENFSTKAAQIYVGLGISRTFDDMPHYMSLELEQPLRANGDSKADN 60 +L+GKY L+ ++ + G+ TF++ + ++ L+QPLR G + Sbjct: 290 LLDGKYIGKKLQNKFDTYELSPPYFAASFGVKHTFENENVFNTIVLKQPLRI-GKREIHQ 348 Query: 61 LFVKIFNKHPGFAPKGKTSVVVYAKTSNGYWENLKETDPRQYDEQKKAVADEIIDLLEAR 120 +FV+IFN FAP+GK+ + +T YW+NL +T +Y +K+ +A EI+ LE Sbjct: 349 IFVRIFNYSNHFAPEGKSVIQAEFETDWDYWDNLWQTGKEKYTAEKERLASEILTHLEML 408 Query: 121 LGKIRENIEVVDVSTPHTIKRYTNNRNGSWMGWEKQMDNIMQEKKLKRSLPGLANFYMIG 180 + + +EV D++TP T+ RYT N G+ GW + N +E +R+L GL+N Y+ G Sbjct: 409 YFGLSQLVEVTDIATPCTLNRYTLNYKGAPEGWRINLQNFKEET--RRTLEGLSNLYLAG 466 Query: 181 HWTQVGGGLPSVVLQARNLVQVLCKENGQVFST 213 HW V GG+P V+L R VQ++C + + F T Sbjct: 467 HW--VSGGVPGVILSGRQAVQLICAKEKKPFFT 497 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.133 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,426,197,517 Number of extensions: 59609373 Number of successful extensions: 143388 Number of sequences better than 1.0e-05: 49 Number of HSP's gapped: 143425 Number of HSP's successfully gapped: 49 Length of query: 226 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 95 Effective length of database: 1,826,543,238 Effective search space: 173521607610 Effective search space used: 173521607610 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 129 (54.3 bits)