BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0382.0022.p (837 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value P96992.3 P96992_STRLI AmlC protein 601 e-169 Q9L036.1 Q9L036_STRCO Secreted alpha-amylase 600 e-169 B5HE21.1 B5HE21_STRPR Secreted alpha-amylase 589 e-166 C4EHJ9.1 C4EHJ9_STRRS Glycosidase 588 e-166 B4AX80.1 B4AX80_9CHRO Alpha amylase catalytic region 581 e-163 >P96992.3 P96992_STRLI AmlC protein Length = 993 Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust. Identities = 325/645 (50%), Positives = 404/645 (62%), Gaps = 57/645 (8%) Query: 240 DFREDSIYFVITSRFYDGDPSNNEHAWDDAKANNP-DSDPAWRGDFKGLIQKLDYIKALG 298 D R+D IYFV+T+RF DGD +NN K+ N + DP +RGDFKGL+ KLDYIK LG Sbjct: 359 DPRKDPIYFVLTARFNDGDATNNRGGSQHEKSGNAANDDPMFRGDFKGLVNKLDYIKGLG 418 Query: 299 FSAIWITPVVQNASGYDYHGYHAINFAKVDPRYESAGASYQDLINAAHAKGIKIIQDVVV 358 FSA+WITPVV N S YDYHGYH +F KVDPR ESAGASYQDLI+AAHAKG+KI QDVV Sbjct: 419 FSAVWITPVVLNRSDYDYHGYHGYDFYKVDPRLESAGASYQDLIDAAHAKGMKIYQDVVY 478 Query: 359 NHTGNFGEENLFP-----------MFKKDETKPDTVSNLLKITDKLPSNY---------- 397 NH+ +G LF + DE +P + L + K +Y Sbjct: 479 NHSSRWGARGLFTPTVYGVRDSQWSWYYDEKQPGFEYDGLTVEPKSGKSYYNGDLWSTAE 538 Query: 398 -------------DSMTPD--QQYQARIALMKTAETNNNMYHTEKSLSWESYTVQTGQIA 442 + +P+ Y + + +YH +WE ++ + Sbjct: 539 PTGNTCVNWGRPTGAKSPEGYTLYDCQWPSPTSGMFPKALYHNCWIGNWEGEDSRSCWLH 598 Query: 443 GDCVDLNTENPVVDQYLIDSYNQYIDMGVDAFRLDTVKHVSRYIFNKYFIPAWKTR---- 498 D D NTENP V YLI +Y++YIDMGVD FR+DT H+ R +N+ F+PA + R Sbjct: 599 EDLADFNTENPQVQNYLIGAYDKYIDMGVDGFRVDTAVHIPRTTWNRRFLPAIQERVAQQ 658 Query: 499 ----GGSDFFMFGEVATRYRDVWNSGIPAISTPFYTWKSAKSYPGDSTNDYASNKASVEQ 554 +FF+FGEVA D WN G S FYTWK K Y D KA++E Sbjct: 659 HGAEAAKNFFVFGEVAAFVNDKWNRGSVTHSAQFYTWKERKEYSADDA------KAALEM 712 Query: 555 -EWADNSTTAGQPTSNNAFLNGNTYHAPDYSMKSGMDVIDFPMHWAFKTAQEAF-SMRSG 612 E+ T QPTS NAFL GN+YH PD+S SGM+VID MH F A AF + + Sbjct: 713 YEYEQQQGTGNQPTSANAFLEGNSYHVPDHSRFSGMNVIDMRMHMNFGDASNAFHNGKDS 772 Query: 613 DQFYNDATWNVTYVDSHDYAPDQAPENQRFAGTQDTWAENLALMFTFRGIPAIYYGSEIE 672 D YNDAT+NV YVDSHDY P+++ E RF+G D WAEN++LM+TFRGIP +YYGSEIE Sbjct: 773 DDSYNDATYNVVYVDSHDYGPNKSSE--RFSGGTDAWAENMSLMWTFRGIPTLYYGSEIE 830 Query: 673 FKKGVVLDVGPNAPLSATGRAYYGDHIEGSVTVQDYGKYTNATGTLAESLNYPLAKHIRQ 732 F+KG +D GP PL+ TGRAYYGDH+ G VT D+ + +ATG +A +L PL KH+++ Sbjct: 831 FQKGRKIDCGPTCPLATTGRAYYGDHLAGDVTASDFSRVDSATGAVATTLAQPLVKHVQR 890 Query: 733 LNLIRRAVPALQKGQYSTENVSGNLAFKRRYTDSAKGIDSFALVTISGNATFTGIPNGTY 792 LN IRRAVPALQ GQYST+ V+G++AFKRRYTD G DSFALVT+SG A + GIPNGTY Sbjct: 891 LNQIRRAVPALQMGQYSTDGVTGDMAFKRRYTDG--GTDSFALVTVSGGAAYDGIPNGTY 948 Query: 793 VDAVTGDTKTVTNGTITLTCSGKGNARVYVLNGKGGIGETGPYLK 837 DAVTGDT+TVT+G +T+ GKGN RVYVLNG G IG GPYLK Sbjct: 949 RDAVTGDTRTVTDGRLTVAAPGKGNLRVYVLNGPGKIGADGPYLK 993 >Q9L036.1 Q9L036_STRCO Secreted alpha-amylase Length = 993 Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust. Identities = 324/645 (50%), Positives = 405/645 (62%), Gaps = 57/645 (8%) Query: 240 DFREDSIYFVITSRFYDGDPSNNEHAWDDAKANNP-DSDPAWRGDFKGLIQKLDYIKALG 298 D R+D IYFV+T+RF DGD +NN K+ N + DP +RGDFKGL+ KLDYIK LG Sbjct: 359 DPRKDPIYFVLTARFNDGDATNNRGGSQHEKSGNAANDDPMFRGDFKGLVNKLDYIKGLG 418 Query: 299 FSAIWITPVVQNASGYDYHGYHAINFAKVDPRYESAGASYQDLINAAHAKGIKIIQDVVV 358 FSA+WITPVV N S YDYHGYH +F KVDPR ESAGASYQDLI+AAHAKG+KI QDVV Sbjct: 419 FSAVWITPVVLNRSDYDYHGYHGYDFYKVDPRLESAGASYQDLIDAAHAKGMKIYQDVVY 478 Query: 359 NHTGNFGEENLFP-----------MFKKDETKPDTVSNLLKITDKLPSNY---------- 397 NH+ +G + LF + DE +P + L + K +Y Sbjct: 479 NHSSRWGAKGLFTPTVYGVRDSQWSWYYDEKQPGFEYDGLTVEPKSGKSYYNGDLWSTAE 538 Query: 398 -------------DSMTPD--QQYQARIALMKTAETNNNMYHTEKSLSWESYTVQTGQIA 442 + +P+ Y + + +YH +WE ++ + Sbjct: 539 PTGNTCVNWGRPTGAKSPEGYTLYDCQWPSPTSGMFPKALYHNCWIGNWEGEDSRSCWLH 598 Query: 443 GDCVDLNTENPVVDQYLIDSYNQYIDMGVDAFRLDTVKHVSRYIFNKYFIPAWKTR---- 498 D D NTENP V YLI +Y++YIDMGVD FR+DT H+ R +N+ F+PA + R Sbjct: 599 EDLADFNTENPQVQNYLIGAYDKYIDMGVDGFRVDTAVHIPRTTWNRRFLPAIQERVAQQ 658 Query: 499 ----GGSDFFMFGEVATRYRDVWNSGIPAISTPFYTWKSAKSYPGDSTNDYASNKASVEQ 554 +FF+FGEVA D WN G S FYTWK K Y D KA++E Sbjct: 659 HGAEAAKNFFVFGEVAAFVNDKWNRGSVNHSAQFYTWKERKEYSADDA------KAALEM 712 Query: 555 -EWADNSTTAGQPTSNNAFLNGNTYHAPDYSMKSGMDVIDFPMHWAFKTAQEAF-SMRSG 612 E+ T QPTS NAFL GN+YH PD+S SGM+VID MH F A AF + + Sbjct: 713 YEYEQQQGTGNQPTSANAFLEGNSYHVPDHSRFSGMNVIDMRMHMNFGDASNAFHNGKDS 772 Query: 613 DQFYNDATWNVTYVDSHDYAPDQAPENQRFAGTQDTWAENLALMFTFRGIPAIYYGSEIE 672 D YNDAT+NV YVDSHDY P+++ E RF+G D WAEN++LM+TFRGIP +YYGSEIE Sbjct: 773 DDSYNDATYNVVYVDSHDYGPNKSSE--RFSGGTDAWAENMSLMWTFRGIPTLYYGSEIE 830 Query: 673 FKKGVVLDVGPNAPLSATGRAYYGDHIEGSVTVQDYGKYTNATGTLAESLNYPLAKHIRQ 732 F+KG +D GP PL+ TGRAYYGDH+ G VT D+ + +ATG +A +L PL KH+++ Sbjct: 831 FQKGRKIDCGPTCPLATTGRAYYGDHLAGDVTASDFSRVDSATGAVATTLAQPLVKHVQR 890 Query: 733 LNLIRRAVPALQKGQYSTENVSGNLAFKRRYTDSAKGIDSFALVTISGNATFTGIPNGTY 792 LN IRRAVPALQ GQYST+ ++G++AFKRRYTD G DSFALVT+SG A + GIPNGTY Sbjct: 891 LNQIRRAVPALQMGQYSTDGITGDMAFKRRYTDG--GTDSFALVTVSGGAAYDGIPNGTY 948 Query: 793 VDAVTGDTKTVTNGTITLTCSGKGNARVYVLNGKGGIGETGPYLK 837 DAVTGDT+TVT+G +T+ GKGN RVYVLNG G IG GPYLK Sbjct: 949 RDAVTGDTRTVTDGRLTVAAPGKGNLRVYVLNGPGKIGADGPYLK 993 >B5HE21.1 B5HE21_STRPR Secreted alpha-amylase Length = 995 Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust. Identities = 325/647 (50%), Positives = 403/647 (62%), Gaps = 62/647 (9%) Query: 240 DFREDSIYFVITSRFYDGDPSNN----EHAWDDAKANNPDSDPAWRGDFKGLIQKLDYIK 295 D R+D IYFV+T+RF DGD +NN +H ANN DP +RGDFKGL+ KLDYIK Sbjct: 362 DPRKDPIYFVLTARFNDGDTTNNRGGNQHTTSGNAANN---DPMFRGDFKGLVNKLDYIK 418 Query: 296 ALGFSAIWITPVVQNASGYDYHGYHAINFAKVDPRYESAGASYQDLINAAHAKGIKIIQD 355 LGFSA+WITPVV N S YDYHGYH +F KVDPR ESAGASYQDLINAAHAKG+KI QD Sbjct: 419 GLGFSAVWITPVVLNRSDYDYHGYHGWDFYKVDPRLESAGASYQDLINAAHAKGMKIYQD 478 Query: 356 VVVNHTGNFGEENLF--------------------PMFKKDETKPDTVSNLLKITDKL-- 393 VV NH+ +G + LF P F+ D D S L Sbjct: 479 VVYNHSSRWGAKGLFVPTVYGVRDTQWSWYYDEKQPGFEYDGLTVDPKSGKSYYNGDLWS 538 Query: 394 ---PSNYDSMT---PDQQYQARIALMKTAETN-------NNMYHTEKSLSWESYTVQTGQ 440 PS + P A + L + ++YH +WE ++ Sbjct: 539 TAEPSGNTCLNWGKPQGTSPAGLTLYNCQWPSPTSGMFPKSLYHNCWIGNWEGEDSRSCW 598 Query: 441 IAGDCVDLNTENPVVDQYLIDSYNQYIDMGVDAFRLDTVKHVSRYIFNKYFIPAWKTR-- 498 + D DL+TE+ V YLI +YN+YIDMGVD FR+DT H+ R +N+ F+PA + R Sbjct: 599 LHDDLADLHTESAQVQNYLIGAYNKYIDMGVDGFRVDTAVHIPRTTWNRRFLPAIQERVT 658 Query: 499 ------GGSDFFMFGEVATRYRDVWNSGIPAISTPFYTWKSAKSYPGDSTNDYASNKASV 552 +FF+FGEVA D WN G S FYTWK K Y D KA++ Sbjct: 659 RQHGAEAAKNFFVFGEVAAFVNDKWNRGSVNHSAQFYTWKERKEYALDDA------KAAL 712 Query: 553 EQ-EWADNSTTAGQPTSNNAFLNGNTYHAPDYSMKSGMDVIDFPMHWAFKTAQEAF-SMR 610 E ++ + TA QPTS NAFL+GN+YHAPD+S SGM+VID MH F A AF + + Sbjct: 713 EMYDYEQQAGTASQPTSTNAFLDGNSYHAPDHSRFSGMNVIDMRMHMNFGDAHNAFHNGK 772 Query: 611 SGDQFYNDATWNVTYVDSHDYAPDQAPENQRFAGTQDTWAENLALMFTFRGIPAIYYGSE 670 D YNDAT+NV YVDSHDY P++ E R+AG D WAEN++LM+TFRGIP +YYGSE Sbjct: 773 DSDDSYNDATYNVVYVDSHDYGPNKGHE--RYAGGTDAWAENMSLMWTFRGIPTLYYGSE 830 Query: 671 IEFKKGVVLDVGPNAPLSATGRAYYGDHIEGSVTVQDYGKYTNATGTLAESLNYPLAKHI 730 IEF+ G +D GP+ PL+ TGRAYYGDH+ G V + K +ATG +A +L PL KH+ Sbjct: 831 IEFQAGKKIDCGPSCPLATTGRAYYGDHVAGDVRTSGFSKVDSATGAVATTLEKPLVKHV 890 Query: 731 RQLNLIRRAVPALQKGQYSTENVSGNLAFKRRYTDSAKGIDSFALVTISGNATFTGIPNG 790 ++LN IRRA+PALQ GQYSTE +SG +AFKRRYT + G DSFALVT++ A +TGIPNG Sbjct: 891 QRLNEIRRAIPALQMGQYSTEGISGGMAFKRRYT--SGGTDSFALVTVTDGAVYTGIPNG 948 Query: 791 TYVDAVTGDTKTVTNGTITLTCSGKGNARVYVLNGKGGIGETGPYLK 837 TY DAVTGDT+TVT+G +++ GKGN RVYVL G G IG GPYLK Sbjct: 949 TYTDAVTGDTRTVTDGRLSVAAPGKGNLRVYVLGGTGKIGTAGPYLK 995 >C4EHJ9.1 C4EHJ9_STRRS Glycosidase Length = 1363 Score = 588 bits (1516), Expect = e-166, Method: Compositional matrix adjust. Identities = 324/666 (48%), Positives = 414/666 (62%), Gaps = 81/666 (12%) Query: 239 GDFREDSIYFVITSRFYDGDPSNNEHAWDDAKANNP-DSDPAWRGDFKGLIQKLDYIKAL 297 GD REDSIYFV+T+RF DGD SNN + N ++DP +RGDFKGLI KLDYIK L Sbjct: 712 GDPREDSIYFVMTARFNDGDTSNNRGGGQHTVSGNARNNDPMFRGDFKGLIDKLDYIKGL 771 Query: 298 GFSAIWITPVVQNASGYDYHGYHAINFAKVDPRYESAGASYQDLINAAHAKGIKIIQDVV 357 GFSA+WITPVV N S YD+HGYH +F +VD R E+ GA+YQDLI+ AHAKGIKI QDVV Sbjct: 772 GFSALWITPVVLNRSDYDFHGYHGWDFHRVDTRLETPGATYQDLIDKAHAKGIKIFQDVV 831 Query: 358 VNHTGNFGEENLF--------------------------PMFKKDETKPDTVSNLLKITD 391 NH+ +G + L+ P+ + P+ + ++ Sbjct: 832 YNHSSRWGAKGLYVPPVWGARDEQWKWLYSEKVPGKEYDPLEEHQGDDPELTARQNEMAK 891 Query: 392 KLPSN--------------YDSMTPDQ------------QYQARIALMKTAETNNNMYHT 425 P N D TP Q Q+ + + M AE+ YH Sbjct: 892 GRPYNGDLWSTAAPAGNTCRDYGTPTQWKSPEGFTIHNCQWPSPTSGMFPAES----YHQ 947 Query: 426 EKSLSWESYTVQTGQIAGDCVDLNTENPVVDQYLIDSYNQYIDMGVDAFRLDTVKHVSRY 485 +WE ++ + D DLNTEN V YLID+YN+YIDMGVD FR+DT HVSR Sbjct: 948 CWIGNWEGSDSKSCWLHDDLADLNTENKAVQDYLIDAYNKYIDMGVDGFRVDTAVHVSRL 1007 Query: 486 IFNKYFIPAWK-----TRG--GSDFFMFGEVATRYRDVWNSGIPAISTPFYTWKSAKSYP 538 ++N+ F+PA + T G G DF++FGEV D WN G S FYTWK + + Sbjct: 1008 VWNRRFLPALQQHAVATHGDKGKDFYVFGEVGAFVNDKWNRGSVNHSAQFYTWKERREFN 1067 Query: 539 GDSTNDYASNKASVEQ-EWADNSTTAGQPTSNNAFLNGNTYHAPDYSMKSGMDVIDFPMH 597 D +A VEQ ++ + T QPT++NAFL GN YHAPD+S SGM+VID MH Sbjct: 1068 PDDA------RAVVEQFDYENLMGTGNQPTTDNAFLRGNAYHAPDHSKFSGMNVIDMRMH 1121 Query: 598 WAFKTAQEAFS-MRSGDQFYNDATWNVTYVDSHDYAPDQAPENQRFAGTQDTWAENLALM 656 F A AF+ + D YNDAT+N YVDSHDY P+++ N+R+ G D WAEN++LM Sbjct: 1122 MNFGDAPNAFNNGKDSDDSYNDATYNTVYVDSHDYGPNKS--NERYTGGTDAWAENMSLM 1179 Query: 657 FTFRGIPAIYYGSEIEFKKGVVLDVGPNAPLSATGRAYYGDHIEGSVTVQDYGKYTNATG 716 +TFRGIP +YYGSEIEF+KG +D GP PL+ TGRAYYGDH+ GSVT +G ++ATG Sbjct: 1180 WTFRGIPTLYYGSEIEFQKGQRIDCGPTCPLATTGRAYYGDHLAGSVTASGFGVVSSATG 1239 Query: 717 TLAESLNYPLAKHIRQLNLIRRAVPALQKGQYSTENVSGNLAFKRRYTDSAKGIDSFALV 776 +A++L+ PL KH+++LN IRRA+PALQKGQYSTE V+G +A+KRR+T A +DSF LV Sbjct: 1240 AVAQTLDKPLVKHVQRLNQIRRAIPALQKGQYSTEGVTGQMAYKRRFTQGA--VDSFVLV 1297 Query: 777 TISGNATFTGIPNGTYVDAVTGDTKTVTNGTITLTCSGKGNARVYVLN-----GKGGIGE 831 ++SG ATFTGIPNGTYVDAVTGD+K VT GT+T+ GKGN R YVL+ G IG Sbjct: 1298 SVSGGATFTGIPNGTYVDAVTGDSKAVTGGTLTIAGGGKGNLRAYVLSLPGNPAPGKIGT 1357 Query: 832 TGPYLK 837 GPYL+ Sbjct: 1358 AGPYLR 1363 >B4AX80.1 B4AX80_9CHRO Alpha amylase catalytic region Length = 840 Score = 581 bits (1498), Expect = e-163, Method: Compositional matrix adjust. Identities = 365/903 (40%), Positives = 493/903 (54%), Gaps = 129/903 (14%) Query: 1 MNSDGNDWYSYTIAGAASASMIFNDGSGKQTADLSRNVKESWFYTDNMWYEANPELPKIP 60 M + NDW+ Y G +A++IFNDG GKQ+ +L R+ E WF+ DN WY NPE P +P Sbjct: 1 MTEEDNDWFVYRFEGIEAANIIFNDGEGKQSGNLRRD-SEGWFFLDNRWYNQNPERPLVP 59 Query: 61 VISVSPAPKTYDSAQTVKLSSTNSGDKIYYTTNGSTPTAASALYTSPIQVASSMTIKAFG 120 VI+ P+ + Y + QTV L S+NS D IYYTT+GS PT S YT+ I++ S+ T++AFG Sbjct: 60 VITTRPSGQIYLTPQTVTLESSNSEDIIYYTTDGSIPTVNSLRYTNSIEINSTTTLQAFG 119 Query: 121 VNSTGQAGNVASFAYVIDLNADLQAPTITPNLPVGHSDTAVTVSFNIKDNKAATTRAYYT 180 +N+ G++G ++SF Y ID NADL+ P+ITP+ P ++VSF ++DN+ A AYYT Sbjct: 120 INAEGESGAISSFIYTIDPNADLERPSITPSQPANTYIDPISVSFTLRDNRQAPVTAYYT 179 Query: 181 DDGTEPTAGSKAYISGNAMAGLTGPSILISKTTTLKFLVIDGAGNQTTQSFVYNIG---K 237 DG+EPT S Y+ G A+ GL GPSI IS+ TTL+F V+D AGN+T +++ YNIG + Sbjct: 180 TDGSEPTRESAIYLQGEALNGLEGPSISISQATTLRFYVVDEAGNETRETYSYNIGPVLE 239 Query: 238 SGDFREDSIYFVITSRFYDGDPSNNEHAWDDAKANNPDS----DPAWRGDFKGLIQKLDY 293 + DFRE++IYF+IT+RFYDGDPSNN D K + P + DP WRGDF+GLIQ+LDY Sbjct: 240 TRDFREETIYFLITTRFYDGDPSNNFFCRDRIKFD-PTTGKAIDPHWRGDFRGLIQRLDY 298 Query: 294 IKALGFSAIWITPVVQNASGYDYHGYHAINFAKVDPRYESAGASYQDLINAAHAKGIKII 353 IK LGFSAIWITP ++N SG DYHGYH ++ ++D R ES A+YQDLIN AHA+GIKII Sbjct: 299 IKDLGFSAIWITPPIENRSGLDYHGYHGYDWTRIDSRLESPDATYQDLINEAHARGIKII 358 Query: 354 QDVVVN-----------------------------------HTGNFG-------EEN--- 368 QDVV+N + GN G E+N Sbjct: 359 QDVVINHSSQYGIRGKVWIDHLPIKYYVPQGSEQGRINYGPYQGNLGNYAYPGREDNDNP 418 Query: 369 LFPMFKKDETKPDTVSNLLKITDKLPSNYDSMTPDQQYQA-RIALMKTAETNNNMYHTEK 427 L P + ++ D L + D + P Y R + + YH E Sbjct: 419 LAPEWYRERVNSDP-QGLEPLIDPKTG---ATVPSPGYNPNRFFGIDANTLDPEWYHQEG 474 Query: 428 SLS---WESYTVQTGQIAGDCVDLNTENPVVDQYLIDSYNQYIDMGVDAFRLDTVKHVSR 484 ++ WES ++QT +AGDC+DL T P V Y+I+S ++Y+DMGVDA R+DTVKH+ R Sbjct: 475 FMAGGDWESASLQTKHMAGDCIDLATRRPNVKDYIINSISRYLDMGVDALRIDTVKHIER 534 Query: 485 YIFNKYFIPAWKTRGGSDFFMFGEVATRYRDVWNSGIPAISTPFYTWKSAKSYPGDSTND 544 +Y I AWK F+FGE + +G W GD D Sbjct: 535 NNLLEY-INAWKAYK-PGLFVFGENLVK-----GTG----------W-------GDLFGD 570 Query: 545 YASNKASVEQEWADNSTTAGQPTSNNAFLNGNTYHAPDYSMKSGMDVIDFPMHWAFK--- 601 N S + W T G N P+ SG V+DF + F+ Sbjct: 571 --DNGPSFIRPWW--YTRLGDDPKN-----------PNSGGDSGFSVLDFSLFSTFRDNV 615 Query: 602 ---TAQEAFSMRSGDQFYNDATWNVTYVDSHDYAPDQAPENQRFAGTQDTWAENLA--LM 656 T + D Y DAT VT++ +HD PD + RF D W A ++ Sbjct: 616 SRGTYSGIGTNLGRDWVYGDATQLVTFLQNHDVGPDN---DFRFRFRGDQWMAAAAYNML 672 Query: 657 FTFRGIPAIYYGSEIEFKKGVVLD-VGPNAPLSATGRAYYGDHIEGSVTVQDYGKYTNAT 715 +T RGIP +YYG EIEF KG D +G + L TGRAY+GDH+ Sbjct: 673 WTVRGIPCLYYGEEIEFMKGAPQDIIGNDDTLDQTGRAYFGDHLTDE------------- 719 Query: 716 GTLAESLNYPLAKHIRQLNLIRRAVPALQKGQYSTENVSGN-LAFKRRYTDSAKGIDSFA 774 + + ++PL KHI++LNLIRR +PALQK N G+ ++F R Y + + Sbjct: 720 -NIRTTQSHPLYKHIQRLNLIRRQIPALQKAPMREVNEWGSGMSFVRDYNNGESYVVVGL 778 Query: 775 LVTISGNATFTGIPNGTYVDAVTGDTKTVTNGTITLTCSGKGNARVYVLNGKGGIGETGP 834 + N T I NGTY DAVTG+T V NG+I+ +A +YVLNG G IGE G Sbjct: 779 AIGGDQNITVGNIRNGTYRDAVTGNTLEVGNGSISFFVRAN-SAGIYVLNGPGKIGEDGV 837 Query: 835 YLK 837 YL+ Sbjct: 838 YLR 840 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.130 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 5,438,137,497 Number of extensions: 244087372 Number of successful extensions: 494381 Number of sequences better than 1.0e-05: 3221 Number of HSP's gapped: 491693 Number of HSP's successfully gapped: 3287 Length of query: 837 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 692 Effective length of database: 1,694,649,028 Effective search space: 1172697127376 Effective search space used: 1172697127376 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 136 (57.0 bits)