BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0382.0016.p (532 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D9U7.1 B1D9U7_9BACL Extracellular solute-binding protein family 1 271 2e-70 C4G757.1 C4G757_ABIDE Putative uncharacterized protein 207 2e-51 B1D569.1 B1D569_9BACL Extracellular solute-binding protein family 1 205 1e-50 C4IBC3.1 C4IBC3_CLOBU Putative liporotein 203 4e-50 C4IBC4.1 C4IBC4_CLOBU Putative liporotein 201 1e-49 >B1D9U7.1 B1D9U7_9BACL Extracellular solute-binding protein family 1 Length = 532 Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust. Identities = 167/493 (33%), Positives = 267/493 (54%), Gaps = 23/493 (4%) Query: 56 AAADTGID-----TSKKVELQFYMLGDAPKDLPVIQDEINKMAQEELNATVKFNYTSWTD 110 A+++TG D TSKKV+L +Y+LGD D + E NKM +++LN TVK N+T+WTD Sbjct: 47 ASSNTGTDAKTPDTSKKVQLTWYLLGDPAPDQEKVVAEWNKMLEQDLNTTVKLNFTTWTD 106 Query: 111 WDQKYKLLLSSGQAIDLIFTADWTQYQSYAKRGAFXXXXXXXXKAAPELQKFVPESMWED 170 W KY LLL+SG+ +D+IF + W + +A +GAF AP V E W++ Sbjct: 107 WQTKYNLLLASGEKVDMIFASSWADFYKFANQGAFMPLNDLLPTYAPTTWSSVSEQDWKE 166 Query: 171 VKVDGKIYTVPATYKEYVTNGFVYREDLRKKYNLPAPTDLASYEAYMDGIAKNEPDLMPM 230 V+ KIY +PATY EY +G VYR+D R++ LP D+ S EAY+DG+ K++ + P+ Sbjct: 167 ATVNDKIYAIPATYPEYTPDGLVYRDDWRQELGLPEIKDVDSIEAYLDGVKKSK-GITPI 225 Query: 231 SLNSDIGNNLHYIYTELNKMVGALPYG--MGV----KYESPTTVYSYWGSDEQKEELKTM 284 + G + ++T G G GV Y++P + +Y + E ++ +K M Sbjct: 226 N-----GKAYNEVFTMFKAFEGYQQIGGDSGVIAAKSYDTPRDIVAYPFTPEFEQWVKKM 280 Query: 285 KRWADKGFIPKNVLNIKDTMQDPITSGKAASMFGDNPTRYNDMKMKISTTHPDWELAYYP 344 K W++KGF + L+ + D I +G+ A + + P + ++PD +L Y+P Sbjct: 281 KTWSEKGFWKSDTLSDQKEAGDAIKTGQGAVYWRNAPGA-GGFITGMEKSNPDIKLGYFP 339 Query: 345 FGKTTGYATPVHPIHNGFAIPKSSKNPERALAFYQKLVLDKRYNQLTQYGIEGKNYTVE- 403 F + P ++N AIPKS+ N ER+L KL D +Y L YG+EG +Y+++ Sbjct: 340 FSRFHNLTVPTLSVNNAMAIPKSAPNAERSLMVLDKLRSDPKYYDLMSYGLEGTDYSMDA 399 Query: 404 DGYYKLVGTS--TSNGFTREGMNGWAWR--NPEFMLFDKGFDGVKAIFEELDKIQKPDLF 459 DG + + + + F G+ W +R + E + G++G A+ EE KP++F Sbjct: 400 DGKHIVTPPAGVEAKDFKGYGIASWGYRVESMERVKQAGGWEGFDALLEEFKSQSKPNIF 459 Query: 460 LGFAEDYTSYQAEKAALEQVEKQYLFPLEAGLVADVDKGLETFMQKAKQAGLDKIQAEWT 519 DY ++++AA+ V +QY PL GLV DVDK L T+ ++ + AG++ + Sbjct: 460 AQVIMDYAPVKSQQAAVNSVIQQYGMPLMMGLVPDVDKALATYRKQLEAAGVNDVLKYVQ 519 Query: 520 KQWNTYTAEKGIK 532 +Q N +GIK Sbjct: 520 EQANKSFDAQGIK 532 >C4G757.1 C4G757_ABIDE Putative uncharacterized protein Length = 518 Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 161/505 (31%), Positives = 246/505 (48%), Gaps = 39/505 (7%) Query: 42 GGSNTAVKTE--GNAAAAADTGIDT---SKKVELQFYMLGDAPKDLPVIQDEINKMAQEE 96 GG VKT N A+ A +G T S++V L Y++ D P +I + NK+ +E+ Sbjct: 30 GGQGNTVKTSNTSNTASTAKSGSATNNFSEEVNLTMYVVSDRPAGQDLIDENFNKLLKEK 89 Query: 97 LNATVKFNYTSWTDWDQKYKLLLSSGQAIDLIFTADWTQYQSYAKRGAFXXXXXXXXKAA 156 +N T+ N+ W+D+ KY LL SSG+ D+ +T++W + A++GAF K A Sbjct: 90 MNTTLTINWIPWSDFANKYPLLFSSGEEFDMAYTSNWLNWTQLARKGAFMQLDDLWEKYA 149 Query: 157 PELQKFVPESMWEDVKVDGKIYTVP---ATYKEYVTNGFVYRE--DLRKKYNLPAPTDLA 211 P+ K ++ + KVDG Y +P ATYK Y G +YR D K+Y D Sbjct: 150 PDNFKNTTDNAKKQAKVDGHYYVIPTQLATYKGY---GPIYRTKFDDGKEYTEEVK-DFE 205 Query: 212 SYEAYMDGIAKNEPDLMPMSLNSD---IGNNLHYIYTELNKMVGALPYGMGVKYESPTTV 268 SYE Y+D + NEP + P + ++ +N YI N + E+ + Sbjct: 206 SYEKYLDWVKANEPGIQPFEVYAEGTAADDNWMYINGFCNSKGATNDFLFFDPKEANPKL 265 Query: 269 YSYWGSDEQKEELKTMKRWADKGFIPKNVLNIKDTMQDPITSGKAASMFGDNPTRYNDMK 328 ++Y+ + K+ L MKRW +KGF K+ L+ DT +G AA+ + T Sbjct: 266 FTYYEYPQVKDYLSMMKRWNEKGFFSKSALS--DTDATKTQNGVAATRLHNIDTYGGYYS 323 Query: 329 MKISTTHPDWELAYYPFGKTTGYATPVHPIHNGFAIPKSSKNPERALAFYQKLVLDKRYN 388 M HP+W + F K Y + + AI +SKNPERALAF+ + D+ Sbjct: 324 M-----HPEWNFKFADFVK---YEAHLPYTQDALAISHTSKNPERALAFWNLVTTDREVY 375 Query: 389 QLTQYGIEGKNYTVED-GYYKLVGTSTSNGFTREGMNGWAWRNPEFMLFDKGF-DGVKAI 446 +G+ G +Y + D G + L+ T N + M WA R EF D + D + + Sbjct: 376 DAFYFGVLGTSYELNDKGRFTLLDT---NNYNTSAM--WAVRTNEFHRMDAKYPDSYETL 430 Query: 447 FEELDKIQKPD----LFLGFAEDYTSYQAEKAALEQVEKQYLFPLEAGLVADVDKGLETF 502 +E ++ K D F F D + + E AA V +QY +PLE G D+DKGL + Sbjct: 431 RKEWEEKIKADDTAEKFSSFIIDTSKIETEYAACNSVHQQYWWPLELGYT-DIDKGLAEY 489 Query: 503 MQKAKQAGLDKIQAEWTKQWNTYTA 527 +K K AG++K++AE KQ + Y A Sbjct: 490 EEKMKAAGIEKVRAEIQKQLDEYVA 514 >B1D569.1 B1D569_9BACL Extracellular solute-binding protein family 1 Length = 539 Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust. Identities = 157/501 (31%), Positives = 241/501 (48%), Gaps = 21/501 (4%) Query: 44 SNTAVKTEGNAAAAADTGIDTSKKVELQFYMLGDAPKD--LPVIQDEINKMAQEELNATV 101 +N + TEG+ D +DTSK V++ + +LG+ P + + E+NK+ +E++NA + Sbjct: 39 NNASTNTEGSTNTGGDAAVDTSKFVKITYMVLGNKPTNGQFEKVLAEVNKIMKEKINAEL 98 Query: 102 KFNYTSWTDWDQKYKLLLSSGQAIDLI-FTADWTQYQSYAKRGAFXXXXXXXXKAAPELQ 160 ++ + WTDW KY L L+SG+ +DLI DW A+RGAF K AP+ Sbjct: 99 EWKWIEWTDWQTKYNLALASGEPVDLITIGTDWLDTWGNAQRGAFMNLDDLLPKYAPQTY 158 Query: 161 KFVPESMWEDVKVDGKIYTVPA-TYKEYVTNGFVYREDLRKKYNLPAPT-DLASYEAYMD 218 +P+ W + K +GKI +P Y ++V +GF YR D K+ + P D Y+ Sbjct: 159 NSIPQEDWAESKYNGKIVLIPEDQYTQWVNHGFFYRGDWAKEAGITEPIKDWEGIGKYLQ 218 Query: 219 GIAKNEPDLMP---MSLNSDIGNNLHYIYT---ELNKMVGALPYGMGVKYESPTTVYSYW 272 I N+PD++P +S S G YT EL G LP Y+ TV S Sbjct: 219 YIKDNKPDVIPWDAVSGTSTFG-GFDTSYTDNLELPISTGYLPVFTTKSYDEKYTVNSPV 277 Query: 273 GSDEQKEELKTMKRWADKGFIPKNVLNIKDTMQDPITSGKAASMFGDNPTRYNDMKMKIS 332 D + MK WADKGF ++VLN K+ + + +G M + + +++++ Sbjct: 278 FEDTMVKYATMMKEWADKGFWREDVLNNKNDTRASLRAG-LTGMDQHHTQTFGGLRVQMD 336 Query: 333 TTHPDWELAYYPFGKTTG-YATPVHPIHNGFAIPKSSKNPERALAFYQKLVLDKRYNQLT 391 P +L +PF + G + H G ++ SKNPERAL Y + D++ L Sbjct: 337 KDQPGSDLQMFPFARQGGNNLLELSITHGGTSVGAHSKNPERALMAYDLIRNDEQIYHLL 396 Query: 392 QYGIEGKNYTVEDGYYKLVG--TSTSNGFTREGMNGWA--WRNPEFMLFDKGFDGVKAIF 447 YGIEG Y V+DG + T +GF + G + P ++D+ + + Sbjct: 397 NYGIEGVQYEVKDGKRQQPAGYDETKDGFYSDFWGGRVDKFEIPSVTVWDQ---LEETYY 453 Query: 448 EELDKIQKPDLFLGFAEDYTSYQAEKAALEQVEKQYLFPLEAGLVADVDKGLETFMQKAK 507 E DKI+K + F D T +AE A+ QV + + G D K +E F K K Sbjct: 454 AEYDKIKKAYPYGQFVFDKTPVEAELTAITQVTGEMGPAIAYGKAGDPVKAVEQFRSKLK 513 Query: 508 QAGLDKIQAEWTKQWNTYTAE 528 AG DK+ AE KQ + Y A+ Sbjct: 514 TAGYDKVLAELQKQMDAYKAK 534 >C4IBC3.1 C4IBC3_CLOBU Putative liporotein Length = 514 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 156/489 (31%), Positives = 238/489 (48%), Gaps = 23/489 (4%) Query: 52 GNAAAAADTGIDTSK--KVELQFYMLGDAPKDLPVIQDEINKMAQEELNATVKFNYTSWT 109 G+ A D SK V L+ Y++GD PKD + ++N++ +E++NAT+ ++ W+ Sbjct: 28 GSKANVGGANSDPSKLDPVTLKMYLIGDKPKDFDEVYGKVNEIMKEKINATLDISFLPWS 87 Query: 110 DWDQKYKLLLSSGQAIDLIFTA-DWTQYQSYAKRGAFXXXXXXXXKA-APELQKFVPESM 167 D KY+LL SG+ D+IFTA W Y A + F K AP + + P+ Sbjct: 88 DMTTKYQLLFQSGENFDIIFTASSWGYYSQVATKNGFYEITDDMLKEYAPNIYENEPKEA 147 Query: 168 WEDVKVDGKIYTVPATYKEYVTNGFVYREDLRKKYNLPAPTDLASYEAYMDGIAKNEPDL 227 WE K++ K Y +P+ EY T F R DL KKY + + EAYMD ++K+ Sbjct: 148 WEQAKINDKKYMIPSDQVEYGTRVFGARGDLMKKYGIEKIENYDDLEAYMDAVSKDTESG 207 Query: 228 MPMSLNSDIGNNLHYIYTELNKMVGAL------PYGMGVKYESPTTVYSYWGSDEQKEEL 281 + + N G NL Y Y G + G V +S +++Y E E Sbjct: 208 IKVIANGG-GQNLQYPYMMEKYAFGGIAGVPTPSIGFDVNDQS-GKIFAYVDRPEYLEYA 265 Query: 282 KTMKRWADKGFIPKNVLNIKDTMQDPITSGKAASMFGDNPTRYNDMKMKISTTHPDWELA 341 K MK +ADKG+ + ++ K T + +GK A+M N D +++ THP+W++ Sbjct: 266 KKMKEFADKGYWSSDSISSKATRDEDFMAGKTATMVW-NIGSVADRAERMNKTHPEWDVQ 324 Query: 342 YYPFGKTTGYATPVHP-IHNGFAIPKSSKNPERALAFYQKLVLDKRYNQLTQYGIEGKNY 400 +TTG ++ +NG AI SKNPERAL L DK LT YGIEGK+Y Sbjct: 325 VAD--QTTGINRMINTYTNNGIAINSISKNPERALMAIDLLRYDKDIYDLTWYGIEGKHY 382 Query: 401 TVEDGYYKLVGTSTSNGFTREGMNGWAWRNPEFMLFDKGFDGVKAIFEELDKIQK----P 456 DG K S+GF + W W + + L D + + DK +K Sbjct: 383 KA-DGDDKYTSLDGSDGFPTANVCPWGWYSQK--LGRSPADEPPIVGQIKDKWEKEYTVT 439 Query: 457 DLFLGFAEDYTSYQAEKAALEQVEKQYLFPLEAGLVADVDKGLETFMQKAKQAGLDKIQA 516 + F+ D ++ + E AA+ V QY P++ G+ +DV++ ++ + +K +AG DKI A Sbjct: 440 NPLAAFSFDDSNVKNEMAAVGNVITQYGVPIDLGMCSDVEEAVKEYKEKLNEAGFDKIYA 499 Query: 517 EWTKQWNTY 525 E KQ Y Sbjct: 500 ECEKQVAEY 508 >C4IBC4.1 C4IBC4_CLOBU Putative liporotein Length = 512 Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 155/495 (31%), Positives = 235/495 (47%), Gaps = 25/495 (5%) Query: 53 NAAAAADTGIDTSKKVELQFYMLGDAPKDLPVIQDEINKMAQEELNATVKFNYTSWTDWD 112 N + + I + V+L+ +++GD P D + D++NK+ +E++NA + + SW D D Sbjct: 28 NVYNSYNDAISDMEYVQLKMFLIGDKPNDFNDVYDKVNKIMKEKINAELSVEFLSWADMD 87 Query: 113 QKYKLLLSSGQAIDLIFTAD-WTQYQSYAKRGAFXXXXXXXXKA-APELQKFVPESMWED 170 +KY LL SG+ DLIFTA+ W Y A R F K AP++ + P+ W+ Sbjct: 88 EKYPLLFQSGEQFDLIFTAESWGHYNEVATRNGFYELTLDMVKEYAPDIYENEPKEAWDQ 147 Query: 171 VKVDGKIYTVPATYKEYVTNGFVYREDLRKKYNLPAPTDLASYEAYMDGIAKNEPDLMPM 230 KV+ KIY +P EY T F R DL +KY + + E YM+ +++++ + + + Sbjct: 148 AKVNNKIYMIPGDQIEYGTRVFGIRGDLARKYGIDDINNYDDLEKYMNAVSQDKENGVKV 207 Query: 231 SLNSDIGNNLHYIYTELNKMVGALPYGMGVKYESPTTVYSYWGSD----------EQKEE 280 N G NL Y Y L K L G + PT Y +D E K Sbjct: 208 IANGG-GQNLQYPYM-LEKNEFQLVEGTPI----PTIAYKVNNNDGNIFAVVDTEEYKNY 261 Query: 281 LKTMKRWADKGFIPKNVLNIKDTMQDPITSGKAASMFGDNPTRYNDMKMKISTTHPDWEL 340 MK +A++G+ + + K T + +GK+A M N D +I+ HP+WE Sbjct: 262 ALKMKEFAERGYWSADSIVRKATRDEDFINGKSAVMVW-NLGSVADRVERINEKHPEWEA 320 Query: 341 AYYPFGKTTGYATPVHP-IHNGFAIPKSSKNPERALAFYQKLVLDKRYNQLTQYGIEGKN 399 K G V+P +NG AI +SKNPERAL L +K +LT YGIEG + Sbjct: 321 EIVDLSK--GLTRTVNPYTNNGMAINTTSKNPERALMALNLLRYNKEIQELTWYGIEGLH 378 Query: 400 YTVEDGYYKLVGTSTSNGFTREGMNGWAW-RNPEFMLFDKGFDGVKAIFEE-LDKIQKPD 457 + E G Y+ T S F + W W N + K D K IF+ ++ + Sbjct: 379 WNAE-GDYEYSQTYKSEDFPTTSVCPWGWYSNSLHRVPFKSSDKSKEIFDTWVENYTVDN 437 Query: 458 LFLGFAEDYTSYQAEKAALEQVEKQYLFPLEAGLVADVDKGLETFMQKAKQAGLDKIQAE 517 + F+ D + E +A+ V KQY P++ G+ DV + + +K +AGL KI E Sbjct: 438 ILNEFSFDDRMVKNEMSAVNNVIKQYGIPIDLGMCDDVYGAINEYKEKLMEAGLYKILDE 497 Query: 518 WTKQWNTYTAEKGIK 532 Q N Y EK +K Sbjct: 498 CNNQINHYIKEKQMK 512 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.132 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,152,348,932 Number of extensions: 139855632 Number of successful extensions: 249462 Number of sequences better than 1.0e-05: 191 Number of HSP's gapped: 249021 Number of HSP's successfully gapped: 194 Length of query: 532 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 391 Effective length of database: 1,732,333,088 Effective search space: 677342237408 Effective search space used: 677342237408 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 134 (56.2 bits)