BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0381.0005.p (488 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0GCE5.1 C0GCE5_9FIRM Putative uncharacterized protein 716 0.0 C1THE0.1 C1THE0_9FIRM Uncharacterized conserved protein 714 0.0 C0ZD92.1 Y2774_BREBN UPF0061 protein BBR47_27740 695 0.0 C2WA77.1 C2WA77_BACCE Putative uncharacterized protein 691 0.0 C3B5T3.1 C3B5T3_BACMY Putative uncharacterized protein 690 0.0 >C0GCE5.1 C0GCE5_9FIRM Putative uncharacterized protein Length = 487 Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/483 (71%), Positives = 390/483 (80%), Gaps = 2/483 (0%) Query: 6 GWNFDNSYARLPESLFTRIKPTPVRLPELIIFNDXXXXXXXXXXXXXRSDKGTAVFAGNE 65 GWNFDNS+ARL ESLF+ + P PV P+LII N + D+G AVFAGN Sbjct: 7 GWNFDNSFARLSESLFSILNPIPVPSPKLIILNKELAKALGLNAVELQKDEGIAVFAGNR 66 Query: 66 VPQGAESLAQAYAGHQFGHFTMLGDGRAVLIGEQITPQGTRVDIQLKGSGRTPYSRRGDG 125 +P+GA LAQAYAGHQFGHFTMLGDGRA+L+GEQITP G R DIQLKGSGRTPYSR GDG Sbjct: 67 IPEGALPLAQAYAGHQFGHFTMLGDGRAILLGEQITPAGERFDIQLKGSGRTPYSRLGDG 126 Query: 126 RAALGPMLREYIISEAMHGLGIPTTRSLAVVATGEPVIRETEQPGAVLTRVAASHLRVGT 185 RA LGPMLREYIISEAMHGLGIPTTRSLAVV TGEPV RETE PGA+LTRVA+SHLRVGT Sbjct: 127 RATLGPMLREYIISEAMHGLGIPTTRSLAVVTTGEPVSRETELPGAILTRVASSHLRVGT 186 Query: 186 FQYAAARGITEDLRTLADYTLQRHYPEVEGATNRYLSLLHEVVKRQADLIAKWQLVGFVH 245 FQY + G TEDLR+LADYTLQRH+P + A NRYL LL EVVKRQA LIAKWQL GF+H Sbjct: 187 FQYVSEWGSTEDLRSLADYTLQRHFPGYDDAPNRYLFLLQEVVKRQASLIAKWQLAGFIH 246 Query: 246 GVMNTDNMALSGETIDYGPCAFLDTYDPETVFSSIDQHGRYAYGNQPQIAAWNLARFAET 305 GVMNTDNMALSGETIDYGPCAF+DTYDP TVFSSID HGRYAYGNQP I WNLARFAET Sbjct: 247 GVMNTDNMALSGETIDYGPCAFMDTYDPATVFSSIDAHGRYAYGNQPSIGGWNLARFAET 306 Query: 306 LLPLLHDDESQAVRLAEEAISDFTERYYRNWLAGMRAKLGLFNEEQQDEALIEELLGMMH 365 LLPLLH+++ +AV+LA+E +S ++E Y NWLAGMRAKLG+FNEEQ DE+LIEELL +M Sbjct: 307 LLPLLHENQDRAVKLAQEVVSGYSELYRCNWLAGMRAKLGIFNEEQGDESLIEELLDLME 366 Query: 366 KHRADYTNTFRALTLGKLADSELFDSKEFAGWHQQWEARLGRQKEAQDASRQLMRSSNPA 425 K+ ADYTNTFRALTL D++L+DS EFA W + W+ARL RQ++++++SRQLMR SNPA Sbjct: 367 KYGADYTNTFRALTLDVFEDTDLYDSTEFAEWRKLWQARLERQEDSKESSRQLMRKSNPA 426 Query: 426 LIPRNHXXXXXXXXXXXXXXXDFSVMERFLGVLSNPYAYSPEQEEYSTLPESCSSPYRTF 485 +IPRNH D+SVMER L VLSNPYA+SP+Q EY+TLPE PYRTF Sbjct: 427 IIPRNH--RVEEALQAAVQKEDYSVMERLLAVLSNPYAHSPQQAEYTTLPEPSGRPYRTF 484 Query: 486 CGT 488 CGT Sbjct: 485 CGT 487 >C1THE0.1 C1THE0_9FIRM Uncharacterized conserved protein Length = 492 Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/486 (69%), Positives = 387/486 (79%), Gaps = 2/486 (0%) Query: 3 VDTGWNFDNSYARLPESLFTRIKPTPVRLPELIIFNDXXXXXXXXXXXXXRSDKGTAVFA 62 + GWN DNSYARLP+ FT++ PTPVR P+LI+ N +S+ G AV A Sbjct: 9 IKIGWNLDNSYARLPKLFFTKLNPTPVRSPKLIVLNYPLATSLGLNVKALQSNDGVAVLA 68 Query: 63 GNEVPQGAESLAQAYAGHQFGHFTMLGDGRAVLIGEQITPQGTRVDIQLKGSGRTPYSRR 122 GN P+G+ LAQAYAGHQFGHFTMLGDGR +LIGEQI+P G R DIQLKGSG+TPYSR+ Sbjct: 69 GNRTPEGSFMLAQAYAGHQFGHFTMLGDGRTLLIGEQISPLGERFDIQLKGSGKTPYSRQ 128 Query: 123 GDGRAALGPMLREYIISEAMHGLGIPTTRSLAVVATGEPVIRETEQPGAVLTRVAASHLR 182 GDGRA LGPMLREYIISEAMH LG+ TTRSLAVV TGE VIRET PGA+LTRVAASHLR Sbjct: 129 GDGRAVLGPMLREYIISEAMHALGVATTRSLAVVTTGESVIRETALPGAILTRVAASHLR 188 Query: 183 VGTFQYAAARGITEDLRTLADYTLQRHYPEVEGATNRYLSLLHEVVKRQADLIAKWQLVG 242 VGTFQYA+ G EDLR+LADYTLQRH+P +E NRYL LL E +KRQA LIAKWQLVG Sbjct: 189 VGTFQYASKWGTVEDLRSLADYTLQRHFPNIEVDENRYLFLLREAIKRQAVLIAKWQLVG 248 Query: 243 FVHGVMNTDNMALSGETIDYGPCAFLDTYDPETVFSSIDQHGRYAYGNQPQIAAWNLARF 302 F+HGVMNTDNMALSGETIDYGPCAF+D YDP TVFSSID HGRYAYGNQP IAAWNLAR Sbjct: 249 FIHGVMNTDNMALSGETIDYGPCAFMDVYDPATVFSSIDTHGRYAYGNQPNIAAWNLARL 308 Query: 303 AETLLPLLHDDESQAVRLAEEAISDFTERYYRNWLAGMRAKLGLFNEEQQDEALIEELLG 362 AETLLPLLHD + +AV+ A+EAISDF E Y+ NWLAGMRAKLG+FNEE +DE+L++ LL Sbjct: 309 AETLLPLLHDKQEKAVKKAQEAISDFAELYHHNWLAGMRAKLGIFNEEIEDESLVDNLLI 368 Query: 363 MMHKHRADYTNTFRALTLGKLADSELFDSKEFAGWHQQWEARLGRQKEAQDASRQLMRSS 422 MM K+RADYTNTFRALT K D++LF + +FA W++ W+ARLGRQ+E +D+S QLMR+S Sbjct: 369 MMQKYRADYTNTFRALTFDKPEDTDLFGNTDFAQWYELWQARLGRQQETKDSSHQLMRNS 428 Query: 423 NPALIPRNHXXXXXXXXXXXXXXXDFSVMERFLGVLSNPYAYSPEQEEYSTLPESCSSPY 482 NPA+IPRNH DFSVMER L VLS PYA+SPEQ +YSTLPE S PY Sbjct: 429 NPAIIPRNH--RVEEALEAVAKQGDFSVMERLLDVLSRPYAHSPEQADYSTLPELSSCPY 486 Query: 483 RTFCGT 488 RTFCGT Sbjct: 487 RTFCGT 492 >C0ZD92.1 Y2774_BREBN UPF0061 protein BBR47_27740 Length = 491 Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/487 (67%), Positives = 389/487 (79%), Gaps = 2/487 (0%) Query: 2 TVDTGWNFDNSYARLPESLFTRIKPTPVRLPELIIFNDXXXXXXXXXXXXXRSDKGTAVF 61 T++ GWNFDNSY LP+S F+R+ P PVR P+L I N+ +S++ A+ Sbjct: 7 TIEPGWNFDNSYTTLPKSFFSRLNPPPVRSPKLAILNERLAKSLGLNVEALQSEEVIAML 66 Query: 62 AGNEVPQGAESLAQAYAGHQFGHFTMLGDGRAVLIGEQITPQGTRVDIQLKGSGRTPYSR 121 AGN+ P+GA LAQAYAGHQFGHFTMLGDGRA+L+GEQITP G R DIQLKGSGRTPYSR Sbjct: 67 AGNKTPEGAMPLAQAYAGHQFGHFTMLGDGRALLLGEQITPTGERFDIQLKGSGRTPYSR 126 Query: 122 RGDGRAALGPMLREYIISEAMHGLGIPTTRSLAVVATGEPVIRETEQPGAVLTRVAASHL 181 GDGRAALGPMLREYIISEAMHGLGIPTTRSLAVV TGE V RE+E PGA+LTRVAASH+ Sbjct: 127 GGDGRAALGPMLREYIISEAMHGLGIPTTRSLAVVTTGESVYRESELPGAILTRVAASHI 186 Query: 182 RVGTFQYAAARGITEDLRTLADYTLQRHYPEVEGATNRYLSLLHEVVKRQADLIAKWQLV 241 RVGTFQ+AA EDLR LADYTLQRH+PE+E NRYL LL V++RQA LIAKWQLV Sbjct: 187 RVGTFQFAARFCSIEDLRALADYTLQRHFPEIETEENRYLLLLKGVIQRQAALIAKWQLV 246 Query: 242 GFVHGVMNTDNMALSGETIDYGPCAFLDTYDPETVFSSIDQHGRYAYGNQPQIAAWNLAR 301 GF+HGVMNTDNMA+SGETIDYGPCAF+DTYDP TVFSSID GRYAYGNQP IA WNL+R Sbjct: 247 GFIHGVMNTDNMAISGETIDYGPCAFMDTYDPATVFSSIDVQGRYAYGNQPYIAVWNLSR 306 Query: 302 FAETLLPLLHDDESQAVRLAEEAISDFTERYYRNWLAGMRAKLGLFNEEQQDEALIEELL 361 FAE+LLPLLH++E+QAV++AE+ +++F++ Y+ NWL GMRAKLGLFNEE+QDEALIE LL Sbjct: 307 FAESLLPLLHENEAQAVKIAEDVLAEFSKLYHSNWLTGMRAKLGLFNEEEQDEALIEGLL 366 Query: 362 GMMHKHRADYTNTFRALTLGKLADSELFDSKEFAGWHQQWEARLGRQKEAQDASRQLMRS 421 MM +HRADYTNTFRALTL + ++ LF + EF WH+QW+ARL RQ E DA +Q M+ Sbjct: 367 NMMKEHRADYTNTFRALTLNQPEETVLFGTSEFTEWHEQWKARLTRQPEDTDAVQQGMKK 426 Query: 422 SNPALIPRNHXXXXXXXXXXXXXXXDFSVMERFLGVLSNPYAYSPEQEEYSTLPESCSSP 481 +NPA+IPRNH D++VMER L VLS+PYAY+PEQ EY+TLP + P Sbjct: 427 NNPAVIPRNH--RVEEALEAAWKEGDYTVMERLLTVLSDPYAYTPEQVEYTTLPAESARP 484 Query: 482 YRTFCGT 488 Y+TFCGT Sbjct: 485 YQTFCGT 491 >C2WA77.1 C2WA77_BACCE Putative uncharacterized protein Length = 491 Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/485 (66%), Positives = 385/485 (79%), Gaps = 2/485 (0%) Query: 4 DTGWNFDNSYARLPESLFTRIKPTPVRLPELIIFNDXXXXXXXXXXXXXRSDKGTAVFAG 63 +TGWNFDNSYARLPES FT+ PTPVR P+LII N+ +S++ A+FAG Sbjct: 9 ETGWNFDNSYARLPESFFTKTSPTPVRSPKLIILNNSLATSLGLNVELLQSEESVAIFAG 68 Query: 64 NEVPQGAESLAQAYAGHQFGHFTMLGDGRAVLIGEQITPQGTRVDIQLKGSGRTPYSRRG 123 N+VP+GA LAQAYAGHQFGHF MLGDGRA+LI EQITP G R D+QLKG GRTPYSRRG Sbjct: 69 NKVPEGASPLAQAYAGHQFGHFNMLGDGRALLISEQITPSGKRFDVQLKGPGRTPYSRRG 128 Query: 124 DGRAALGPMLREYIISEAMHGLGIPTTRSLAVVATGEPVIRETEQPGAVLTRVAASHLRV 183 DGRAALGPMLREYIISEAM+ LGIPTTRSLAVV TGE ++RET PGAVLTRVA+SH+RV Sbjct: 129 DGRAALGPMLREYIISEAMYALGIPTTRSLAVVTTGESILRETALPGAVLTRVASSHIRV 188 Query: 184 GTFQYAAARGITEDLRTLADYTLQRHYPEVEGATNRYLSLLHEVVKRQADLIAKWQLVGF 243 GTFQYAAA G EDL+ LADYT+QRH+P ++ YL+LL EV+K+QA LIAKWQLVGF Sbjct: 189 GTFQYAAANGSVEDLKALADYTIQRHFPTIQSDEKPYLALLQEVMKQQASLIAKWQLVGF 248 Query: 244 VHGVMNTDNMALSGETIDYGPCAFLDTYDPETVFSSIDQHGRYAYGNQPQIAAWNLARFA 303 +HGVMNTDNMA+SGETIDYGPCAF+DTY+P TVFSSID GRYAYGNQP I WNLARFA Sbjct: 249 IHGVMNTDNMAISGETIDYGPCAFMDTYNPATVFSSIDTQGRYAYGNQPYIGVWNLARFA 308 Query: 304 ETLLPLLHDDESQAVRLAEEAISDFTERYYRNWLAGMRAKLGLFNEEQQDEALIEELLGM 363 E+LLPLL++DE QAV+LA++ +S+F Y +WL GMRAKLG+ NEE +D+ALI+ LL + Sbjct: 309 ESLLPLLYEDEEQAVQLAQDELSNFGALYEEHWLTGMRAKLGICNEEAEDKALIDGLLKL 368 Query: 364 MHKHRADYTNTFRALTLGKLADSELFDSKEFAGWHQQWEARLGRQKEAQDASRQLMRSSN 423 M K++ADYTNTF ALT D++LF S+EF W+++W+ RL RQ+E+ AS+QLMR +N Sbjct: 369 MEKYQADYTNTFLALTFDTDKDTDLFTSQEFTAWNEKWKERLSRQQESNSASQQLMRDNN 428 Query: 424 PALIPRNHXXXXXXXXXXXXXXXDFSVMERFLGVLSNPYAYSPEQEEYSTLPESCSSPYR 483 PA+IPRNH D++VM R L VLSNPYA+SPEQ EY+TLP + S PYR Sbjct: 429 PAVIPRNH--RVEEALEAAVKQGDYNVMNRLLAVLSNPYAHSPEQCEYATLPAASSRPYR 486 Query: 484 TFCGT 488 TFCGT Sbjct: 487 TFCGT 491 >C3B5T3.1 C3B5T3_BACMY Putative uncharacterized protein Length = 505 Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust. Identities = 324/483 (67%), Positives = 382/483 (79%), Gaps = 2/483 (0%) Query: 6 GWNFDNSYARLPESLFTRIKPTPVRLPELIIFNDXXXXXXXXXXXXXRSDKGTAVFAGNE 65 GWN DNSYARLPES F+ + PTPV LP+LII N +S+ G AV AGN Sbjct: 25 GWNLDNSYARLPESFFSTLSPTPVGLPKLIILNHPVATSLGLNIEELQSEDGVAVLAGNR 84 Query: 66 VPQGAESLAQAYAGHQFGHFTMLGDGRAVLIGEQITPQGTRVDIQLKGSGRTPYSRRGDG 125 +P+G+ LAQAYAGHQFGHF MLGDGRA+LIGEQITP G R DIQLKGSGRTPYSRRGDG Sbjct: 85 IPEGSIPLAQAYAGHQFGHFNMLGDGRALLIGEQITPSGERFDIQLKGSGRTPYSRRGDG 144 Query: 126 RAALGPMLREYIISEAMHGLGIPTTRSLAVVATGEPVIRETEQPGAVLTRVAASHLRVGT 185 RAALGPMLREYIISEAMH LGIPTTRSLA+V+TGE +IRET PGA+LTRVA+SH+RVGT Sbjct: 145 RAALGPMLREYIISEAMHALGIPTTRSLAIVSTGELIIRETALPGAILTRVASSHIRVGT 204 Query: 186 FQYAAARGITEDLRTLADYTLQRHYPEVEGATNRYLSLLHEVVKRQADLIAKWQLVGFVH 245 FQYAAA G E+L+ LADYT++RH+P ++ N YL+LL EV+K+QA LIAKWQLVGF+H Sbjct: 205 FQYAAASGSVEELKILADYTIKRHFPAIQSQENPYLALLQEVMKQQASLIAKWQLVGFIH 264 Query: 246 GVMNTDNMALSGETIDYGPCAFLDTYDPETVFSSIDQHGRYAYGNQPQIAAWNLARFAET 305 GVMNTDNM +SGETIDYGPCAF+D YDP TVFSSID GRYAYGNQP I WNLARFAE+ Sbjct: 265 GVMNTDNMTISGETIDYGPCAFMDEYDPATVFSSIDTQGRYAYGNQPYIGVWNLARFAES 324 Query: 306 LLPLLHDDESQAVRLAEEAISDFTERYYRNWLAGMRAKLGLFNEEQQDEALIEELLGMMH 365 LLP+LH D QAV++A+ AISDF Y ++WLAGMR KLG+FNEE +D+ALI+ELL +M Sbjct: 325 LLPILHTDLEQAVQIAQNAISDFGTLYEKHWLAGMRTKLGIFNEEAEDKALIDELLKIME 384 Query: 366 KHRADYTNTFRALTLGKLADSELFDSKEFAGWHQQWEARLGRQKEAQDASRQLMRSSNPA 425 K+RADYTNTF ALT G D++LF S+EF W+++W+ARL RQ+E++ +S QLMR +NPA Sbjct: 385 KYRADYTNTFLALTFGTHKDTDLFKSQEFTKWNEKWQARLSRQEESKSSSHQLMRDTNPA 444 Query: 426 LIPRNHXXXXXXXXXXXXXXXDFSVMERFLGVLSNPYAYSPEQEEYSTLPESCSSPYRTF 485 +IPRNH ++SVME+ L VLSNPYA+SPEQ EY T P S PYRTF Sbjct: 445 IIPRNH--RVEEALDAAVKQGNYSVMEQLLVVLSNPYAHSPEQSEYCTPPAPSSRPYRTF 502 Query: 486 CGT 488 CGT Sbjct: 503 CGT 505 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.134 0.400 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,813,554,945 Number of extensions: 113315204 Number of successful extensions: 268595 Number of sequences better than 1.0e-05: 880 Number of HSP's gapped: 265364 Number of HSP's successfully gapped: 921 Length of query: 488 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 348 Effective length of database: 1,741,754,103 Effective search space: 606130427844 Effective search space used: 606130427844 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 133 (55.8 bits)