BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0377.0026.p (338 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KH99.1 B3KH99_9BACI Glycosidase PH1107-related 635 e-180 B3K5G5.1 B3K5G5_9BACI Glycosidase PH1107-related 601 e-170 B1D5Z0.1 B1D5Z0_9BACL Glycosidase PH1107-related 408 e-112 A4XMG7.1 A4XMG7_CALS8 Glycosidase, PH1107-related 281 7e-74 C3QA42.1 C3QA42_9BACE Putative uncharacterized protein 250 1e-64 >B3KH99.1 B3KH99_9BACI Glycosidase PH1107-related Length = 338 Score = 635 bits (1637), Expect = e-180, Method: Compositional matrix adjust. Identities = 302/338 (89%), Positives = 320/338 (94%) Query: 1 MKITRHKSNPIVVPGGYEWRKVTVFNPAVIIDNGKFYMIERTAGSLTPCKNFLGLLESED 60 MKITRH +NPIVVPG YEWRKVTVFNPAVIIDNGKFYMIERTAGSLTPCKN LGLLESED Sbjct: 1 MKITRHPNNPIVVPGTYEWRKVTVFNPAVIIDNGKFYMIERTAGSLTPCKNVLGLLESED 60 Query: 61 GVNFTHVKDEPIVTPDMLGFPYGSVQDPRIVKIDGTFYLNYALRPCAMSYYPTGAGVPER 120 GVNFTHVKDEPIVTPDMLGFPYGSVQDPRIVKIDGT+YLNYALRPCAMSYYPTGAG+PER Sbjct: 61 GVNFTHVKDEPIVTPDMLGFPYGSVQDPRIVKIDGTYYLNYALRPCAMSYYPTGAGIPER 120 Query: 121 SIPTYPDGWGEEEGHWLTRSSILKSDNLLDWEFVADTTPLDINDRDNILFPEKIGGKFVL 180 +IP YPDGWGEEEGHWLTRSSI+KSDNL+DWEFVADTTPLDINDRDNILFPEKI GK+VL Sbjct: 121 TIPKYPDGWGEEEGHWLTRSSIVKSDNLIDWEFVADTTPLDINDRDNILFPEKINGKYVL 180 Query: 181 LRRPEEYVGEAYGTEKAAMWITYSEDLIHWEEPKLLATAGNLSWESRKIGGSAPPVRTDK 240 LRRPEEYVG AYGT+ AA+WITYSEDL+HWEEPKLLA A N +WESRKIGG+ PPVRTDK Sbjct: 181 LRRPEEYVGAAYGTDSAAIWITYSEDLVHWEEPKLLAKAENPAWESRKIGGATPPVRTDK 240 Query: 241 GWLVLYHGVDENIVYRVGAMLLDLEQPEKIIARTHNFIMEPETYYEKFGFQIPNVIFPTG 300 GWLVLYHGVD+ +VYRVGAMLLDL PEK+IART FIMEPETYYEKFG+QIPNV+FPTG Sbjct: 241 GWLVLYHGVDDQVVYRVGAMLLDLNNPEKVIARTKTFIMEPETYYEKFGYQIPNVVFPTG 300 Query: 301 NVVKDGLLYIYYGVTDTAIALATVPLDELVEHILQEAQ 338 NVVKDGLLYIYYGVTDTAIALATVP+DELVEHIL E Q Sbjct: 301 NVVKDGLLYIYYGVTDTAIALATVPVDELVEHILNEPQ 338 >B3K5G5.1 B3K5G5_9BACI Glycosidase PH1107-related Length = 338 Score = 601 bits (1549), Expect = e-170, Method: Compositional matrix adjust. Identities = 287/338 (84%), Positives = 310/338 (91%) Query: 1 MKITRHKSNPIVVPGGYEWRKVTVFNPAVIIDNGKFYMIERTAGSLTPCKNFLGLLESED 60 MKITRH NPIVVPG Y+WRKVTVFNPAVIIDNGKFYMIERTAGSLTPCKN+LGLLES D Sbjct: 1 MKITRHAENPIVVPGLYDWRKVTVFNPAVIIDNGKFYMIERTAGSLTPCKNYLGLLESTD 60 Query: 61 GVNFTHVKDEPIVTPDMLGFPYGSVQDPRIVKIDGTFYLNYALRPCAMSYYPTGAGVPER 120 GV+FTHV DEP+VTPD LGFPYGS+QDPRIVKID TFYLNYALRPCAM+YYPTGAG+PER Sbjct: 61 GVHFTHVLDEPVVTPDQLGFPYGSIQDPRIVKIDDTFYLNYALRPCAMNYYPTGAGIPER 120 Query: 121 SIPTYPDGWGEEEGHWLTRSSILKSDNLLDWEFVADTTPLDINDRDNILFPEKIGGKFVL 180 SIP YPDGWGEEEGHWLTRS IL S +L+ WE++ DTTPLDINDRDNILFPEKI GK+VL Sbjct: 121 SIPEYPDGWGEEEGHWLTRSGILTSKDLIHWEYLCDTTPLDINDRDNILFPEKINGKYVL 180 Query: 181 LRRPEEYVGEAYGTEKAAMWITYSEDLIHWEEPKLLATAGNLSWESRKIGGSAPPVRTDK 240 LRRPEEYVGE YGTEKAAMWI+YSEDL+HW+EPKLLA A N WE +KIGGS PPVRTDK Sbjct: 181 LRRPEEYVGEEYGTEKAAMWISYSEDLVHWDEPKLLAKAENNDWEFKKIGGSTPPVRTDK 240 Query: 241 GWLVLYHGVDENIVYRVGAMLLDLEQPEKIIARTHNFIMEPETYYEKFGFQIPNVIFPTG 300 GWLVLYHGVD++ VYRVGA+LLDLE PEKIIART FIMEPETYYEKFG+QIPNVIFPTG Sbjct: 241 GWLVLYHGVDQDTVYRVGALLLDLENPEKIIARTRRFIMEPETYYEKFGYQIPNVIFPTG 300 Query: 301 NVVKDGLLYIYYGVTDTAIALATVPLDELVEHILQEAQ 338 NVVKD LLYIYYGVTDTAIALATVPLD+LV++IL E Q Sbjct: 301 NVVKDDLLYIYYGVTDTAIALATVPLDDLVDYILNEPQ 338 >B1D5Z0.1 B1D5Z0_9BACL Glycosidase PH1107-related Length = 338 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 199/338 (58%), Positives = 251/338 (74%) Query: 1 MKITRHKSNPIVVPGGYEWRKVTVFNPAVIIDNGKFYMIERTAGSLTPCKNFLGLLESED 60 MK+TRH++NPIVVPGG +WRK VFNP V+ +GK+YM ER AGSL P + +GLLESED Sbjct: 1 MKLTRHENNPIVVPGGADWRKAAVFNPGVVQADGKYYMYERAAGSLRPFQTCIGLLESED 60 Query: 61 GVNFTHVKDEPIVTPDMLGFPYGSVQDPRIVKIDGTFYLNYALRPCAMSYYPTGAGVPER 120 GVNF V DEP+ T +MLG+P GSV+D R+V+IDG +Y+ YAL+P +PTG G+P Sbjct: 61 GVNFRPVLDEPVFTAEMLGYPGGSVEDARVVRIDGLYYMCYALQPYGFDCWPTGTGLPAY 120 Query: 121 SIPTYPDGWGEEEGHWLTRSSILKSDNLLDWEFVADTTPLDINDRDNILFPEKIGGKFVL 180 YP+ +TRS I S + + ++ ++ TTP +I+DRDN LFPEKIGG+F + Sbjct: 121 YPEHYPEWADNGVEPMITRSGIAVSVDGIHFKPLSYTTPAEIDDRDNALFPEKIGGRFAI 180 Query: 181 LRRPEEYVGEAYGTEKAAMWITYSEDLIHWEEPKLLATAGNLSWESRKIGGSAPPVRTDK 240 LRRP +YVGE YGT MWI+YS++L W EP+L+A A N WE KIG +A P+RTD+ Sbjct: 181 LRRPLQYVGEKYGTNSPGMWISYSDNLFDWTEPELVAVAENPEWEGTKIGAAATPIRTDR 240 Query: 241 GWLVLYHGVDENIVYRVGAMLLDLEQPEKIIARTHNFIMEPETYYEKFGFQIPNVIFPTG 300 GWLVLYHGVD VYRVGA+LLDLE P+K+IART IMEPETYYEKFG +PNV+FPT Sbjct: 241 GWLVLYHGVDARSVYRVGALLLDLEDPKKVIARTREPIMEPETYYEKFGLVLPNVVFPTA 300 Query: 301 NVVKDGLLYIYYGVTDTAIALATVPLDELVEHILQEAQ 338 N+V DGLLYIYYG DT+IALATVPL+EL++ + EA Sbjct: 301 NLVIDGLLYIYYGCCDTSIALATVPLNELLDAMTDEAN 338 >A4XMG7.1 A4XMG7_CALS8 Glycosidase, PH1107-related Length = 333 Score = 281 bits (718), Expect = 7e-74, Method: Compositional matrix adjust. Identities = 159/342 (46%), Positives = 211/342 (61%), Gaps = 19/342 (5%) Query: 1 MKITRHKSNPIVVPG-GYEWRKVTVFNPAVIIDNGKFYMIERTAGSLTPCKNFLGLLESE 59 MK+ ++K+NPI+ P EW + V NP V +NGKFYM+ R AG GL SE Sbjct: 1 MKLKKYKNNPILKPNPTNEWESLAVCNPGVWYENGKFYMLYRAAGHDLTHYVHFGLAISE 60 Query: 60 DGVNFTHVKDEPIVTPDMLGFPYGSVQDPRIVKIDGTFYLNYALRPCAMSYYPTGAGVPE 119 DG NF V +P+++P G G V+DPRIVK FY+ YA R YP G + Sbjct: 61 DGFNFERVSKKPVLSPSPDGPDAGCVEDPRIVKYGDIFYITYAYRA-----YPPGQYWNK 115 Query: 120 RSIPTY------PDGWGEEEGHWLTRSSILKSDNLLDWEFVADTTPLDINDRDNILFPEK 173 I TY P E +T S +L S +L+ ++ + T +++DRD ILFPEK Sbjct: 116 NKIKTYEPNENMPVCLKEN----ITNSGLLMSKDLIHFKRLGRITKANLDDRDVILFPEK 171 Query: 174 IGGKFVLLRRPEEYVGEAYGTEKAAMWITYSEDLIHWEEPKLLATAGNLSWESRKIGGSA 233 I GK+V+L RP ++VG YG E ++WI++SEDL+ WEE KLLA A WE+ KIGGS Sbjct: 172 INGKYVMLHRPMQWVGPKYGCEYPSIWISFSEDLMVWEESKLLAKA-EYEWET-KIGGST 229 Query: 234 PPVRTDKGWLVLYHGVDENIVYRVGAMLLDLEQPEKIIARTHNFIMEPETYYEKFGFQIP 293 PP++T++GWL LYH VD+ +YRVGAMLLDL+ P IIART FIMEPE YE G Sbjct: 230 PPIKTEEGWLTLYHAVDKKGIYRVGAMLLDLKDPTIIIARTKEFIMEPEYEYETKGIY-N 288 Query: 294 NVIFPTGNVVKDGLLYIYYGVTDTAIALATVPLDELVEHILQ 335 +FPTGNVV DG+LYIYYG D +AT+ L+ ++E++ + Sbjct: 289 GCVFPTGNVVVDGILYIYYGAADMYCCVATIELEAILEYLTR 330 >C3QA42.1 C3QA42_9BACE Putative uncharacterized protein Length = 341 Score = 250 bits (639), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 140/343 (40%), Positives = 199/343 (58%), Gaps = 8/343 (2%) Query: 1 MKITRHKSNPIVVPG-GYEWRKVTVFNPAVIIDNGKFYMIERTAGSLTPCKNFLGLLESE 59 MK+ + + NPI+ P +W + NP V DNG FYM+ R AG+ LGL S Sbjct: 1 MKLKKFEGNPILSPSEKNDWESLVTCNPGVFYDNGMFYMLYRAAGNDREHVIRLGLATSR 60 Query: 60 DGVNFTHVKDEPIVTPDMLGFPYGSVQDPRIVKIDGTFYLNYALRPCAMSYYPTGAGVPE 119 DG F D P +P + G G V+DPRIVK DG +Y+ YA RP Y G E Sbjct: 61 DGFYFERHSDRPAFSPSVDGPDSGCVEDPRIVKFDGEYYITYAYRPVPPGQY-WKFGHDE 119 Query: 120 RSIPTYPDGWGEEEGHWLTRSSILKSDNLLDWEFVADTTPLDINDRDNILFPEKIGGKFV 179 +P L + + + + + + T ++DRD ILFPEK+ G+FV Sbjct: 120 VLLPECGKYAPAAIAKNLGNTGLAVTTDFCHFRRLGRLTSPVLDDRDVILFPEKVNGQFV 179 Query: 180 LLRRPEEYVGEAYGTEKAAMWITYSEDLIHWE--EPKLLATAGNLSWESRKIGGSAPPVR 237 +L RP++Y+GE +G E ++WI +S+DL+ WE E LL T +WE KIGGS PP++ Sbjct: 180 MLHRPKQYIGEKFGVEYPSIWIKFSDDLLDWEGKESHLLLTGRENTWE-EKIGGSTPPLK 238 Query: 238 TDKGWLVLYHGVDE--NIVYRVGAMLLDLEQPEKIIARTHNFIMEPETYYEKFGFQIPNV 295 TDKGWL+LYHGV+ YRVGA+LLDL+ P KI+A+TH I+EPE +E G+ Sbjct: 239 TDKGWLMLYHGVEHGGKGYYRVGALLLDLDNPLKILAKTHESILEPEEDFEINGY-YNGC 297 Query: 296 IFPTGNVVKDGLLYIYYGVTDTAIALATVPLDELVEHILQEAQ 338 +FPTGNV+ D L++YYG D + +AT ++EL+ ++L + + Sbjct: 298 VFPTGNVIVDDTLFVYYGSADKYVCVATCSVNELLSYLLTDCK 340 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.140 0.436 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,398,021,564 Number of extensions: 112317748 Number of successful extensions: 189297 Number of sequences better than 1.0e-05: 293 Number of HSP's gapped: 188469 Number of HSP's successfully gapped: 294 Length of query: 338 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 202 Effective length of database: 1,779,438,163 Effective search space: 359446508926 Effective search space used: 359446508926 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)