BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0377.0006.p (175 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A1HU29.1 A1HU29_9FIRM Putative uncharacterized protein 162 8e-39 B1BBR5.1 B1BBR5_CLOBO Putative uncharacterized protein 146 6e-34 A5TXJ9.1 A5TXJ9_FUSNP Possible bacteriophage resistance protein 108 2e-22 A5KQL8.1 A5KQL8_9FIRM Putative uncharacterized protein 107 3e-22 B7CB63.1 B7CB63_9FIRM Putative uncharacterized protein 95 3e-18 >A1HU29.1 A1HU29_9FIRM Putative uncharacterized protein Length = 169 Score = 162 bits (411), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 85/157 (54%), Positives = 103/157 (65%) Query: 4 HIKICGIHPAYLDYLRAYDPLVSLDPKHNRKFVGIIFEVNGHKYYAPLSSPKPKHRTIPD 63 I +C I AYL+YLR +D VS + R FVGI+ EVNG KYYAPLSSPK KH I Sbjct: 3 EILMCRIDIAYLNYLRQFDNRVSYNDSGTRMFVGILLEVNGQKYYAPLSSPKSKHAKISS 62 Query: 64 RAVDVVKIDGGKLGVINLNNMIPVHKSAIIDIDISHVADVQYRGLLTNQALFIRSNEQAI 123 +AVD+ KIDGGKLGVINLNNM+PV + II IDI+ D +YR LL NQ IR + I Sbjct: 63 QAVDIYKIDGGKLGVINLNNMVPVPDATIIVIDINQEPDEKYRVLLQNQLRQIRKDAARI 122 Query: 124 KKKASRLYSIVKSQKQPKLNARCCNYIALEAALFGYN 160 KKKA LY ++ +K P L+ RCC+Y LE Y+ Sbjct: 123 KKKAQTLYHLIVQKKVPVLSKRCCDYALLEMQCAKYS 159 >B1BBR5.1 B1BBR5_CLOBO Putative uncharacterized protein Length = 180 Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 75/169 (44%), Positives = 106/169 (62%), Gaps = 4/169 (2%) Query: 5 IKICGIHPAYLDYLRAYDPLVSLDPKHN---RKFVGIIFEVNGHKYYAPLSSPKPKHRTI 61 IKI I Y++YLR +D V + K N RK++GI+ +G Y+AP+SSPK KH+ I Sbjct: 3 IKIYLIKKEYINYLRQFDKNVDFNQKMNGNIRKYIGIVVHTHGFNYFAPMSSPKEKHKKI 62 Query: 62 PDRAVDVVKIDGGKLGVINLNNMIPVHKSAIIDIDISHVADVQYRGLLTNQALFIRSNEQ 121 D +D VKI G+LGVINLNNMIPV + ++ DI++ + +Y+ LL NQ +I N++ Sbjct: 63 NDNQIDCVKIHNGELGVINLNNMIPVDNNELMLFDINNQEE-KYKNLLFNQLRYINRNKK 121 Query: 122 AIKKKASRLYSIVKSQKQPKLNARCCNYIALEAALFGYNIVPAASQDVA 170 IK+KA LYSIV S+ +P +N RCCN+ LE Y + +VA Sbjct: 122 NIKRKAEVLYSIVNSKTKPHINKRCCNFKLLEKKCIEYTYTKQSFSEVA 170 >A5TXJ9.1 A5TXJ9_FUSNP Possible bacteriophage resistance protein Length = 301 Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 60/164 (36%), Positives = 94/164 (57%), Gaps = 8/164 (4%) Query: 3 IHIKICGIHPAYLDYLRAYDPLVSLDPKHNRKFVGIIFEVNGHKYYAPLSSPKPKHRTIP 62 + +KI I Y+DYLR D V + R ++GI+ + KY++PL SPK KH+ + Sbjct: 14 VGVKIYIIQEEYIDYLRQSDEKVLKNKLEKRPYIGIVLKQGNFKYFSPLGSPKEKHKLMK 73 Query: 63 DRAVDVVKIDGGKLGVINLNNMIPVHKSAIIDIDI------SHVADVQYRGLLTNQALFI 116 R +D +KI G+LG+INLNN IP+ + I +DI S+++D +Y + +Q ++ Sbjct: 74 -RRLDFIKIKNGELGIINLNNSIPIKGNEIRLLDINALKNSSNISDRKYGIMCEDQLIWC 132 Query: 117 RSNEQAIKKKASRLYSIVKSQKQPK-LNARCCNYIALEAALFGY 159 +N + I+K +LYS+ + K PK L RCCN+ LE Y Sbjct: 133 DNNFEIIEKNFKKLYSLYLNNKLPKSLQERCCNFKLLEEKSLDY 176 >A5KQL8.1 A5KQL8_9FIRM Putative uncharacterized protein Length = 163 Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 91/161 (56%), Gaps = 7/161 (4%) Query: 5 IKICGIHPAYLDYLRAYDPLVSLDPKHNRKFVGIIFEVNGHKYYAPLSSPKPKHRTIPDR 64 +K I Y++YL+ YD V + K R +VG++ E++G KYY P +SPK KHR + + Sbjct: 1 MKFYNIKDEYINYLKKYDAKVVDNKKGKRPYVGVVLEIDGIKYYTPFTSPKEKHRKMKN- 59 Query: 65 AVDVVKIDGGKLGVINLNNMIPVHKSAIIDIDISHVADVQYRGLLTNQALFIRSNEQAIK 124 D KI+ G G IN NNMIPV +SA++ IDI + D +Y+ LL NQ I+++ + I+ Sbjct: 60 TKDFRKINQGIYGAINFNNMIPVVESALLLIDIDAMEDSKYQRLLQNQYKCIKADREQIQ 119 Query: 125 KKASRLYSIVKSQKQP------KLNARCCNYIALEAALFGY 159 A RL + + + K+ RCC+ LE + Y Sbjct: 120 LTAKRLRDTLFKKDEELNGNDKKIKERCCDLPLLEEVVKHY 160 >B7CB63.1 B7CB63_9FIRM Putative uncharacterized protein Length = 160 Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 57/154 (37%), Positives = 87/154 (56%), Gaps = 7/154 (4%) Query: 4 HIKICGIHPAYLDYLRAYDPLVSLDPK----HNRKFVGIIFEVNGHKYYAPLSSPKPKHR 59 +IK+ + Y+DYL Y P + + K H R ++G+I +V+G Y+APLSS K KH+ Sbjct: 3 NIKLYTVSDKYIDYLSIYAPHLFHNKKPNQIHKRVYIGVILKVHGMDYFAPLSSYKEKHK 62 Query: 60 TIPDRAVDVVKIDGGKLGVINLNNMIPVHKSAIIDIDISHVADVQYRGLLTNQALFIRSN 119 + + +D +KI + VINLNNM PV +D S D++Y+ LL ++ +I+S Sbjct: 63 QMKE-TLDFIKI--KRYSVINLNNMFPVQSKDYTYLDFSKEQDLKYKSLLESEYRYIKSI 119 Query: 120 EQAIKKKASRLYSIVKSQKQPKLNARCCNYIALE 153 + I K AS +Y I S K L RC ++ LE Sbjct: 120 QGKIIKNASLVYKIKTSGKINSLTKRCNDFKLLE 153 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.403 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,010,888,946 Number of extensions: 39354594 Number of successful extensions: 91081 Number of sequences better than 1.0e-05: 23 Number of HSP's gapped: 91055 Number of HSP's successfully gapped: 23 Length of query: 175 Length of database: 3,060,696,203 Length adjustment: 126 Effective length of query: 49 Effective length of database: 1,873,648,313 Effective search space: 91808767337 Effective search space used: 91808767337 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)