BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0376.0011.p (328 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A8VQZ7.1 A8VQZ7_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 464 e-129 B3KK61.1 B3KK61_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 463 e-128 Q9KBQ8.1 Q9KBQ8_BACHD BH1867 protein 459 e-127 Q97IW1.1 Q97IW1_CLOAB Beta-xylosidase, family 43 glycosyl hydrolase 414 e-114 B1DAG2.1 B1DAG2_9BACL Alpha-N-arabinofuranosidase EC=3.2.1.55 411 e-113 >A8VQZ7.1 A8VQZ7_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 Length = 320 Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust. Identities = 224/327 (68%), Positives = 252/327 (77%), Gaps = 9/327 (2%) Query: 1 MSRKKEYSNPLVEQRADPWVYKHTDGYYYFTASVPEYDRIEVRRAATIEGLRGAEPVVAW 60 M++ +Y NP++EQRADPW+YKHTDGYYYFTASVPEYDRIEVRRA TIEGL+GA P V W Sbjct: 1 MTQSYDYKNPVIEQRADPWMYKHTDGYYYFTASVPEYDRIEVRRAKTIEGLKGATPAVVW 60 Query: 61 RKYETGPLSANIWAPEIHYIHGKWYIYFAAARTTETKEGLFDHRMYALENESANPLEGRW 120 RKY+ GPLSANIWAPEIHYI G WYIYFAAARTTET GLFDHRMYAL +S NP+EG W Sbjct: 61 RKYDEGPLSANIWAPEIHYIDGAWYIYFAAARTTETDNGLFDHRMYALACQSNNPVEGTW 120 Query: 121 VEKGQVKTAWESFALDATAFQHKGVLYYVWAQKDPDIPGNSNLYISEMENPWTLTGPQTM 180 EKGQVK+ WESF LDAT F+HKG YYVWAQKDPDI GNSN+YI +M NPWTL G Sbjct: 121 EEKGQVKSKWESFCLDATVFEHKGDHYYVWAQKDPDIEGNSNMYIDKMVNPWTLKG---- 176 Query: 181 IXXXXQTMIAKPEHPWEIIGFSVNEGAAVLKRNGKIFMSFSASATDHNYCMGXXXXXXXX 240 Q MI++PE+ WE +GF VNEGAAV+KRNGKIFM+FS SATDHNY MG Sbjct: 177 ----DQVMISQPEYEWEKVGFYVNEGAAVIKRNGKIFMTFSGSATDHNYRMGLLYADEES 232 Query: 241 XXXXXXXXXKHPEPVFQTSEANGQFGPGHNSFTVNENGE-DVLIYHCRNYKEITGDPLYD 299 K +PVF TSE NGQ+GPGHNSFT +E+GE D+L+YH RNYKEI GDPLYD Sbjct: 233 DLLNPSSWHKLDKPVFATSEENGQYGPGHNSFTTSEDGEKDLLVYHARNYKEIDGDPLYD 292 Query: 300 PNRHTRAQVLEWNEDGTPNFGVPVKDG 326 PNRHTR Q EW+E+G P F PV D Sbjct: 293 PNRHTRVQAFEWDENGFPVFEKPVPDA 319 >B3KK61.1 B3KK61_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 Length = 324 Score = 463 bits (1191), Expect = e-128, Method: Compositional matrix adjust. Identities = 218/318 (68%), Positives = 253/318 (79%), Gaps = 9/318 (2%) Query: 9 NPLVEQRADPWVYKHTDGYYYFTASVPEYDRIEVRRAATIEGLRGAEPVVAWRKYETGPL 68 NPL+EQRADPW+YKH+DG+YYFT SVPEYDRIE+RR+ TI+GL AE + WRK+++G + Sbjct: 8 NPLIEQRADPWIYKHSDGFYYFTGSVPEYDRIELRRSETIQGLADAEGLTVWRKHDSGLM 67 Query: 69 SANIWAPEIHYIHGKWYIYFAAARTTETKEGLFDHRMYALENESANPLEGRWVEKGQVKT 128 SANIWAPE+H+I GKWY+Y+AAA T+ET++GLFDHRM+ LEN SANPLEG WVEKGQV T Sbjct: 68 SANIWAPELHHIEGKWYVYYAAAHTSETRDGLFDHRMFVLENASANPLEGEWVEKGQVIT 127 Query: 129 AWESFALDATAFQHKGVLYYVWAQKDPDIPGNSNLYISEMENPWTLTGPQTMIXXXXQTM 188 WESFALDAT F+HKG YYVWAQKDP IPGNSNLYIS MENPWTLTG Q Sbjct: 128 KWESFALDATTFEHKGRRYYVWAQKDPAIPGNSNLYISLMENPWTLTG--------EQVC 179 Query: 189 IAKPEHPWEIIGFSVNEGAAVLKRNGKIFMSFSASATDHNYCMGXXXXXXXXXXXXXXXX 248 I+ PE+ WE IG+ VNEGAAVLKRNG+IFM++SASATDHNY MG Sbjct: 180 ISVPEYDWEKIGYLVNEGAAVLKRNGRIFMTYSASATDHNYAMGLLTADEDSDLLDPGSW 239 Query: 249 XKHPEPVFQTSEANGQFGPGHNSFTVNENG-EDVLIYHCRNYKEITGDPLYDPNRHTRAQ 307 K P PVF TSEANGQ+GPGHNSFTV+E+G D+L+YH R+YKEI GDPLYDPNRH R Q Sbjct: 240 VKSPLPVFTTSEANGQYGPGHNSFTVSEDGLLDILVYHARSYKEIVGDPLYDPNRHARVQ 299 Query: 308 VLEWNEDGTPNFGVPVKD 325 ++ WNEDGTPNFGVP D Sbjct: 300 IIRWNEDGTPNFGVPRAD 317 >Q9KBQ8.1 Q9KBQ8_BACHD BH1867 protein Length = 327 Score = 459 bits (1180), Expect = e-127, Method: Compositional matrix adjust. Identities = 215/320 (67%), Positives = 249/320 (77%), Gaps = 9/320 (2%) Query: 7 YSNPLVEQRADPWVYKHTDGYYYFTASVPEYDRIEVRRAATIEGLRGAEPVVAWRKYETG 66 Y NP +EQRADPWVYKH DG+YYFT SVP YD IE+RRA T++GLR AEP V WRKY+ G Sbjct: 8 YRNPFIEQRADPWVYKHADGFYYFTGSVPAYDCIELRRAKTLDGLREAEPKVVWRKYDRG 67 Query: 67 PLSANIWAPEIHYIHGKWYIYFAAARTTETKEGLFDHRMYALENESANPLEGRWVEKGQV 126 P+SANIWAPEIHYI GKWYIYFAAART ETK GLFDHRM+ LENESANPLEG W+EKGQ+ Sbjct: 68 PMSANIWAPEIHYIEGKWYIYFAAARTAETKAGLFDHRMFVLENESANPLEGSWIEKGQI 127 Query: 127 KTAWESFALDATAFQHKGVLYYVWAQKDPDIPGNSNLYISEMENPWTLTGPQTMIXXXXQ 186 T WESF+LDAT F+HKGV Y VW QKDP I GNSNLYI+EMENPWT+ G Q Sbjct: 128 FTKWESFSLDATTFEHKGVRYLVWPQKDPSIEGNSNLYIAEMENPWTIKG--------EQ 179 Query: 187 TMIAKPEHPWEIIGFSVNEGAAVLKRNGKIFMSFSASATDHNYCMGXXXXXXXXXXXXXX 246 M++KPE WE+IG+ VNEG AV+KRNGK+F+++SASATDH+YCMG Sbjct: 180 VMLSKPEFDWEVIGYKVNEGPAVIKRNGKVFIAYSASATDHHYCMGLLWANEEADLLDPA 239 Query: 247 XXXKHPEPVFQTSEANGQFGPGHNSFTVNENGE-DVLIYHCRNYKEITGDPLYDPNRHTR 305 K P PVFQTSE NGQ+GPGHNSFTV E+G+ DVL+YH R+YKEI GDPLYDPNRH R Sbjct: 240 SWTKSPTPVFQTSEENGQYGPGHNSFTVTEDGKHDVLVYHARSYKEIEGDPLYDPNRHAR 299 Query: 306 AQVLEWNEDGTPNFGVPVKD 325 ++ W++DG P FG P+ D Sbjct: 300 LKLFTWDKDGFPQFGEPLPD 319 >Q97IW1.1 Q97IW1_CLOAB Beta-xylosidase, family 43 glycosyl hydrolase Length = 327 Score = 414 bits (1064), Expect = e-114, Method: Compositional matrix adjust. Identities = 199/322 (61%), Positives = 241/322 (74%), Gaps = 11/322 (3%) Query: 9 NPLVEQRADPWVYKHTDGYYYFTASVPEYDRIEVRRAATIEGLRGAEPVVAWRKYETGPL 68 NP++ QRADP +YKH DGYYYFTASVPEYDRIEVR+A TIEGLR AEPV WR++E+G + Sbjct: 8 NPIIIQRADPMIYKHNDGYYYFTASVPEYDRIEVRKAKTIEGLRNAEPVDVWRRHESGEM 67 Query: 69 SANIWAPEIHYIHGKWYIYFAAARTTETKEGLFDHRMYALENESANPLEGRWVEKGQVKT 128 S IWAPEIH+I+G WYIYFAAA ++ F+HRM+ ++NE+ NP G WVEKG++KT Sbjct: 68 SNLIWAPEIHFINGAWYIYFAAAPDKNIEDDTFNHRMFVIQNENENPFTGNWVEKGRIKT 127 Query: 129 AWESFALDATAFQHKGVLYYVWAQKDPDIPGNSNLYISEMENPWTL-TGPQTMIXXXXQT 187 AWESF+LDAT F+H LYYVWAQ+D +I G+SN+YI+EMENPWTL T P Sbjct: 128 AWESFSLDATIFEHNEKLYYVWAQQDINIKGHSNIYIAEMENPWTLKTKP---------V 178 Query: 188 MIAKPEHPWEIIGFSVNEGAAVLKRNGKIFMSFSASATDHNYCMGXXXXXXXXXXXXXXX 247 M+ KPE WEI GF VNEG AVLK+NGKIF+++SASATD NYC+G Sbjct: 179 MLTKPELEWEIKGFWVNEGPAVLKKNGKIFITYSASATDVNYCIGMLTAEENSNLLDKNS 238 Query: 248 XXKHPEPVFQTSEANGQFGPGHNSFTVNENGE-DVLIYHCRNYKEITGDPLYDPNRHTRA 306 K PVF+TS N Q+GPGHNSFTV+E+G+ DV++YH RNY EI GDPLYDPNRHTRA Sbjct: 239 WTKSQTPVFKTSMENHQYGPGHNSFTVSEDGKHDVIVYHARNYTEIKGDPLYDPNRHTRA 298 Query: 307 QVLEWNEDGTPNFGVPVKDGRE 328 Q++ W EDGTP+FGVP D E Sbjct: 299 QIINWREDGTPDFGVPEVDSLE 320 >B1DAG2.1 B1DAG2_9BACL Alpha-N-arabinofuranosidase EC=3.2.1.55 Length = 321 Score = 411 bits (1057), Expect = e-113, Method: Compositional matrix adjust. Identities = 196/315 (62%), Positives = 229/315 (72%), Gaps = 9/315 (2%) Query: 10 PLVEQRADPWVYKHTDGYYYFTASVPEYDRIEVRRAATIEGLRGAEPVVAWRKYETGPLS 69 PL+ QRADP++Y+H+DGYYYF ASVPEYDRIE+RRA +EGL PVV WRK+ETG LS Sbjct: 3 PLIVQRADPFIYRHSDGYYYFVASVPEYDRIEIRRAQNLEGLVTTTPVVIWRKHETGLLS 62 Query: 70 ANIWAPEIHYIHGKWYIYFAAARTTETKEGLFDHRMYALENESANPLEGRWVEKGQVKTA 129 ANIWAPE+H+I G+WY+YFAAA T+ET EGLFDHRM+ LE SANPLEG W EKGQV+ A Sbjct: 63 ANIWAPELHFIDGRWYVYFAAAHTSETNEGLFDHRMFVLECASANPLEGEWEEKGQVRAA 122 Query: 130 WESFALDATAFQHKGVLYYVWAQKDPDIPGNSNLYISEMENPWTLTGPQTMIXXXXQTMI 189 WESF+LDAT F+H G YYVWAQKDP I GNSNLYIS+M NPWTLTG QTMI Sbjct: 123 WESFSLDATTFEHNGERYYVWAQKDPAIEGNSNLYISKMSNPWTLTG--------KQTMI 174 Query: 190 AKPEHPWEIIGFSVNEGAAVLKRNGKIFMSFSASATDHNYCMGXXXXXXXXXXXXXXXXX 249 + P+ WE IGF VNEGAA ++R ++F+S+SASATD NYCMG Sbjct: 175 SIPDLDWERIGFKVNEGAAFIRRGDRVFLSYSASATDFNYCMGILEASADADLLDAASWD 234 Query: 250 KHPEPVFQTSEANGQFGPGHNSFTVNENGEDVL-IYHCRNYKEITGDPLYDPNRHTRAQV 308 K P PV T E G +GPGHN+FTV E+G L ++H R YKEI GDPLYDPNRHT Sbjct: 235 KSPVPVLTTDELLGLYGPGHNNFTVAEDGTTALFVFHARTYKEIVGDPLYDPNRHTFVAE 294 Query: 309 LEWNEDGTPNFGVPV 323 L+W EDG P+F V Sbjct: 295 LKWTEDGRPDFRASV 309 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.134 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,118,638,655 Number of extensions: 84658746 Number of successful extensions: 152309 Number of sequences better than 1.0e-05: 202 Number of HSP's gapped: 151477 Number of HSP's successfully gapped: 202 Length of query: 328 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 192 Effective length of database: 1,779,438,163 Effective search space: 341652127296 Effective search space used: 341652127296 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 131 (55.1 bits)