BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0373.0012.p (354 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q9K7H9.1 Q9K7H9_BACHD BH3382 protein 114 2e-23 Q2B877.1 Q2B877_9BACI Putative uncharacterized protein 107 2e-21 B9M565.1 B9M565_GEOSF Glycosyl transferase group 1 92 6e-17 Q9YCS0.1 Q9YCS0_AERPE Glycosyl transferase, group 1 77 2e-12 B0JV14.1 B0JV14_MICAN Probable glycosyl transferase 76 5e-12 >Q9K7H9.1 Q9K7H9_BACHD BH3382 protein Length = 356 Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 84/295 (28%), Positives = 135/295 (45%), Gaps = 10/295 (3%) Query: 1 MRILYFYKFCLLGGVTTQLANRLKFLHGR-AEVHFAFLEDYGGASAFEGYAHVCILGTPS 59 M+IL+ + + GGV T +R L+ E HF +L++ G + G A + Sbjct: 1 MKILFTF-YLATGGVVTLNRHRYHALNSEDCECHFLYLKNGSGLNTM-GNARTYVTNDDE 58 Query: 60 ELRAYIEAHDFDVIITIDTYELYEALGPAEQKKVIIHEVH---TTYEEPLRKLAESKDIL 116 +++A + A +DVI+ + L K II +V T +E K + Sbjct: 59 DIKALLYAKQYDVIVVTLDFLFVNRLRRLGYKGKIIFDVQGFGTDIKELFEKANDHFITG 118 Query: 117 PFNYVITPSDYMKEMLDQIGIPD--AYHINNCLDTELFKYEAVSGKRPPTILWVGKLDQH 174 + +++P E L P A+H +NC+ +F + + I WVG+++++ Sbjct: 119 EVDAILSPKTSHLEQLIAHHFPSTPAFHFHNCITFSMFTCKPQPKPKRTIIGWVGRIEEN 178 Query: 175 KNWESFMNIAGRLNAQFPDLHYLLVGGYTAPDEITSK-LQARVKALELR-HFEWLPKVDY 232 KNW F+ I +L + L + A + K + VK L+LR H L V Y Sbjct: 179 KNWRYFLKIGEKLLKEDSSLELWIFEDPKAANPSEKKHFHSMVKKLKLRNHMRSLQNVPY 238 Query: 233 EEMNHYYSAVAESGGVYVSTTRNESFGMTVLEAMACRCPVVVPDVGALPELLDDE 287 E M +YS + SGG ST++ E FG VLEAM C+CPVV D + + +E Sbjct: 239 ERMAEFYSLMGRSGGFLCSTSKKEGFGYAVLEAMCCKCPVVCTDSDGIKSFVINE 293 >Q2B877.1 Q2B877_9BACI Putative uncharacterized protein Length = 364 Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 2/212 (0%) Query: 141 YHINNCLDTELFKYEAVSGKRPPTILWVGKLDQHKNWESFMNIAGRLNAQFPDLHYLLVG 200 Y +NC ++ F Y + K P I WVG+L+++KNW F+ I +L + P + + Sbjct: 153 YSFHNCFNSRDFHYRHLPKKPNPIIGWVGRLEENKNWRDFLMIGAKLIRKNPSIRLWMFE 212 Query: 201 GYT-APDEITSKLQARVKALELR-HFEWLPKVDYEEMNHYYSAVAESGGVYVSTTRNESF 258 T AP + + +K L L+ H + ++ M +YS + +SGG ST++ E F Sbjct: 213 DSTLAPPDQRKAFETVIKQLNLQSHLTVFANLPHDRMADHYSMIGDSGGFLCSTSKVEGF 272 Query: 259 GMTVLEAMACRCPVVVPDVGALPELLDDELSVSLYASGREEECAERVAWLXXXXGLRARL 318 G VLEAM CRCPV+ D + + ++ + G ++ + L LR + Sbjct: 273 GYAVLEAMVCRCPVISTDSDGVRHFIIHNVTGKFFTLGNIQQAVKEGHDLIANSSLREAI 332 Query: 319 KTLGEQKARKTYSIEEVGKAYMALLEQFMEER 350 + Q ++ +S E ++ ++ + + + Sbjct: 333 RQRASQHIQQNFSPGEYAAHFLNMITELKQMK 364 >B9M565.1 B9M565_GEOSF Glycosyl transferase group 1 Length = 343 Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 84/308 (27%), Positives = 148/308 (48%), Gaps = 26/308 (8%) Query: 1 MRILYFYKFCLLGGVTTQLANRLKFLHGR---AEVHFAFLEDYGGASAFEGYAHVCILGT 57 +++LY Y+F LGGV L +R + ++ F +D G Y + L Sbjct: 2 LKLLYVYRFATLGGVERVLISRAEAFRDHQVPVKIFLYFFKDLGAIDKLNNYFALHELSD 61 Query: 58 PSELRAYIEAHDFDVIITIDTYELYEALGPAEQKKVIIHEVHTTYEEPLRKLAESKDILP 117 ++ I+ + +D II+IDT ++ L K ++ E HTTY + L E LP Sbjct: 62 NIQIVNRIDENQYDFIISIDTPQI---LKFNISKSKLLFECHTTYLNSRKYLME----LP 114 Query: 118 --FNYVITPSDYMKEMLDQIGIPDAYH----INNCL--DTELFKYEAVSGKRPPTILWVG 169 ++ PS MK L Q P+ + + N + DT + + KRP +L++G Sbjct: 115 AEVRVIVVPSSGMKTTLAQ-ERPELKNKIVVVRNYVPEDTTSYHGGRIWVKRP--LLYLG 171 Query: 170 KLDQHKNWESFMNIAGRLNAQF-PDLHYLLVGGYTAPDEITSKLQARVKALELRHFEWLP 228 ++D+HKN +++ + + D+ +LVG + +LQ R L R LP Sbjct: 172 RMDEHKNICELLDVFAYYRSHYGDDMMLVLVGMSAETINLPQELQQR--NLTDRAV-VLP 228 Query: 229 KVDYEEMNHYYSAVAESGGVYVSTTRNESFGMTVLEAMACRCPVVVPDVGALPELLDDEL 288 V ++++N YS + + GG+++S++ ESFG++ EAM PV++ A +L++ + Sbjct: 229 PVGFDKVNRLYSLIKKHGGIFMSSSVAESFGLSAAEAMVNGLPVLLSGTHAHVDLVEGNM 288 Query: 289 SVSLYASG 296 + LY G Sbjct: 289 NF-LYPLG 295 >Q9YCS0.1 Q9YCS0_AERPE Glycosyl transferase, group 1 Length = 363 Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 72/294 (24%), Positives = 129/294 (43%), Gaps = 26/294 (8%) Query: 67 AHDFDVIITIDTYELYEALGPAEQKKVIIHEVHTTYEE--------PLRKLAES--KDIL 116 H++DVI+ D P K ++ ++H +++ PL + K I Sbjct: 79 GHEYDVIVD-DIAHAVPWYSPLVTKTPVVAQIHHVHQDVVYIELPKPLAWIVSRAEKTIA 137 Query: 117 PF--NYVITPSDYMKEMLDQIGI-PDAYHI-NNCLDTELFKYEAVSGKRPPTILWVGKLD 172 ++ KE+ ++GI PD + N +D E KY S PTILW G++ Sbjct: 138 KIYRRFIAVSQSTKKELAKRLGIDPDRIAVVPNGVDLE--KYRPGSKDPRPTILWAGRIK 195 Query: 173 QHKNWESFMNIAGRLNAQFPDLHYLLVGGYTAPDEITSKLQARVKALELRHFEWLPKVDY 232 +KN + + + + PD +++G T E K++ K LE R +L K+ Sbjct: 196 MYKNLDHLLKAYRIVKQEIPDAQLIIIG--TGDQE--QKMRELAKKLEPRDVHFLGKMSE 251 Query: 233 EEMNHYYSAVAESGGVYVSTTRNESFGMTVLEAMACRCPVVVPDVGALPELLDDELSVSL 292 +E + + + VST+ E +G+T+ EA AC+ P + +V L + + + L Sbjct: 252 QEKIMWM----QRAWIIVSTSMIEGWGITITEAAACKIPAIAYNVPGLRDSVKHMETGIL 307 Query: 293 YASGREEECAERVAWLXXXXGLRARLKTLGEQKARKTYSIEEVGKAYMALLEQF 346 G E+ A+ +AWL LR +L A +++S + ++ +LE Sbjct: 308 VEPGNIEQLAKAIAWLLTDNSLRNKLSENAYNYA-QSFSWDNTAITFLNILEDI 360 >B0JV14.1 B0JV14_MICAN Probable glycosyl transferase Length = 356 Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 59/191 (30%), Positives = 98/191 (51%), Gaps = 23/191 (12%) Query: 163 PTILWVGKLDQHKNWESFMNIAGRLNAQF----PDLHYLLVGGYTAPDEITSKLQARVKA 218 P L++G+ D HKN GRL F P+ L+VG + T LQ +V+A Sbjct: 183 PYFLYLGRYDPHKNL-------GRLITAFSQIDPEYQLLIVGQFDP--RFTPALQQQVEA 233 Query: 219 LEL-RHFEWLPKVDYEEMNHYYSAVAESGGVYVSTTRNESFGMTVLEAMACRCPVVVPDV 277 L + + ++L V YEE+ + + VY S E FG+ VLEA+AC PV+ ++ Sbjct: 234 LSISQRVQFLNYVSYEELPQLLNQA--TALVYPSLW--EGFGLPVLEAIACGTPVITSNL 289 Query: 278 GALPELLDD-ELSVSLYASGREEECAERVAWLXXXXGLRARLKTLGEQKARKTYSIEEVG 336 +LPE+ D + ++ Y+ E +++A LR +LK+L Q+A + +S E+ G Sbjct: 290 SSLPEVTGDAAILINPYSIDEMREAMQQIA---KNNQLRLKLKSLSRQRA-ELFSWEKTG 345 Query: 337 KAYMALLEQFM 347 + +L+ F+ Sbjct: 346 QETATILQSFL 356 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.137 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,148,458,758 Number of extensions: 89520349 Number of successful extensions: 211089 Number of sequences better than 1.0e-05: 324 Number of HSP's gapped: 212135 Number of HSP's successfully gapped: 324 Length of query: 354 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 217 Effective length of database: 1,770,017,148 Effective search space: 384093721116 Effective search space used: 384093721116 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)