BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0373.0003.p (298 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A9U877.1 A9U877_PHYPA Predicted protein (Fragment) 421 e-116 B1DCB0.1 B1DCB0_9BACL Ketopantoate reductase ApbA/PanE domain pr... 250 1e-64 B1D5F8.1 B1D5F8_9BACL Ketopantoate reductase ApbA/PanE domain pr... 245 3e-63 Q73QU0.1 Q73QU0_TREDE Lipase/acylhydrolase, GDSL family 181 6e-44 C0B6U5.1 C0B6U5_9FIRM Putative uncharacterized protein 175 5e-42 >A9U877.1 A9U877_PHYPA Predicted protein (Fragment) Length = 254 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 197/254 (77%), Positives = 228/254 (89%) Query: 15 VIGSVYALRFAQSGLDVTLLARGKRLETLQRNGLRYNDNGAVQQISVRTIEKLVNDDIYD 74 ++GS+YALRFAQSGLDVTLLARGKRLE LQ+NGLRYND+G ++Q+S++TI KL +DDIYD Sbjct: 1 IVGSIYALRFAQSGLDVTLLARGKRLEALQKNGLRYNDHGTIKQMSIKTIGKLEDDDIYD 60 Query: 75 FIFVPVRYDQAESALSAIKNNQSQTIITLTNTVGYDSWLKIVGDRLLPGFPGAGGDIKDD 134 FIFVPVR+DQAESALSAIKNNQSQTI+TLTNTV Y+SWL IVGDRLLPGFPGAGGD+K+D Sbjct: 61 FIFVPVRFDQAESALSAIKNNQSQTIVTLTNTVSYESWLDIVGDRLLPGFPGAGGDMKED 120 Query: 135 VLYAQFGSETWQGTIFGEINGQVTERVKELAAILETAGLHYEILHNIQAFHVSHAALAAV 194 VLYAQFGSE QGTIFGEINGQ +ERVKELA ILETAGLHYEI H++ AFHVSH A+A Sbjct: 121 VLYAQFGSEKHQGTIFGEINGQTSERVKELAEILETAGLHYEIQHDMYAFHVSHTAVAVG 180 Query: 195 NKHFYANDGMVDITAARSEVILSKLAADVKQNIRLVEQAGIPVIPPETKAMGEWPDEDII 254 NKHFY ++G+VD+ ARSE LSK+AAD+KQN+RLV AGIPVIP ETKAMGE P++D+ Sbjct: 181 NKHFYTDEGVVDLETARSERTLSKIAADIKQNLRLVGLAGIPVIPTETKAMGEMPEQDLT 240 Query: 255 SHYRQMLSNDFIID 268 + YRQMLSNDFIID Sbjct: 241 AMYRQMLSNDFIID 254 >B1DCB0.1 B1DCB0_9BACL Ketopantoate reductase ApbA/PanE domain protein Length = 305 Score = 250 bits (638), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 131/292 (44%), Positives = 188/292 (64%), Gaps = 10/292 (3%) Query: 4 KQNRILIFGAGVIGSVYALRFAQSGLDVTLLARGKRLETLQRNGLRYNDNGAVQQISVRT 63 +Q RILIFGAGVIGS YA++F Q+G+DVT+LAR R +TL +GL+Y D G ++ + V Sbjct: 7 RQPRILIFGAGVIGSTYAVKFIQAGIDVTMLARANRFKTLNEHGLQYMDKGNLKSVKVHV 66 Query: 64 IEKLVNDDIYDFIFVPVRYDQAESALSAIKNNQSQTIITLTNT-VGYDSWLKIVGDRLLP 122 IEKL NDDIYDFIFVPVRYDQ+E+AL A+K+N+S I+T+TNT GY SWL I+GDRLLP Sbjct: 67 IEKLFNDDIYDFIFVPVRYDQSEAALLALKDNRSPNIVTMTNTSSGYSSWLNIIGDRLLP 126 Query: 123 GFPGAGGDIKDDVLYAQFGSETWQGTIFGEINGQVTERVKELAAILETAGLHYEILHNIQ 182 GFP AGG I D +L++QFG Q T+FGEING+ TER LA + A + Y I ++ Sbjct: 127 GFPSAGGQIVDGLLHSQFGPRIIQATMFGEINGRKTERTAALARLFRMANIPYTIAKDMT 186 Query: 183 AFHVSHAALA-AVNKHFYANDGMVDITAARSEVILSKLAADVKQNIRLVEQAGIPVIPPE 241 F ++HA L A+ Y + +D A+S+ ++ +K ++ ++++G+ + P Sbjct: 187 GFQITHAVLQIAMINQLYVDGKRMDQAEAQSKKTAHQMTTSLKTYLKALKRSGVQLSP-- 244 Query: 242 TKAMGEW----PDEDIISHYRQMLSNDFIIDVKLGNHAVSAKPEILLLDEVF 289 AM W PD + + ++L + +V ++A +A EI LL + F Sbjct: 245 --AMFGWALIVPDSILDFVFLKLLGTKLVGEVLFTDYADNAYGEIELLSKDF 294 >B1D5F8.1 B1D5F8_9BACL Ketopantoate reductase ApbA/PanE domain protein Length = 301 Score = 245 bits (626), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 125/297 (42%), Positives = 194/297 (65%), Gaps = 2/297 (0%) Query: 1 LNIKQNRILIFGAGVIGSVYALRFAQSGLDVTLLARGKRLETLQRNGLRYNDNGAVQQIS 60 ++ KQ RILIFGAGVIGS+YA++ ++G DV+L A R ++L+ NGL+Y + G V+ I Sbjct: 1 MSAKQGRILIFGAGVIGSMYAIKLIEAGFDVSLFAHSNRFQSLRENGLQYKEKGTVRSIK 60 Query: 61 VRTIEKLVNDDIYDFIFVPVRYDQAESALSAIKNNQSQTIITLT-NTVGYDSWLKIVGDR 119 V I+KL N+D+YDFIFV VRYD++ESAL A+K+NQS+ I+T+T N++G+ SWL IVGDR Sbjct: 61 VNVIDKLENNDVYDFIFVTVRYDRSESALLALKDNQSKNIVTMTSNSIGFSSWLDIVGDR 120 Query: 120 LLPGFPGAGGDIKDDVLYAQFGSETWQGTIFGEINGQVTERVKELAAILETAGLHYEILH 179 LLP FPG GG IKD VL+ +F + T FGE+NG VTER++ LA I +TA L Y I Sbjct: 121 LLPAFPGFGGQIKDGVLHPRFLPKIIAATAFGEMNGVVTERIENLAKIFKTAKLPYVIKK 180 Query: 180 NIQAFHVSHAAL-AAVNKHFYANDGMVDITAARSEVILSKLAADVKQNIRLVEQAGIPVI 238 ++QA+ ++H+ A+ +A + ++D A + K+ +K +R +++AG+ + Sbjct: 181 DMQAYLITHSVSDIAMLSFLHAENKIIDKKTAGTRKTARKITVTLKAYLRAIQKAGVSID 240 Query: 239 PPETKAMGEWPDEDIISHYRQMLSNDFIIDVKLGNHAVSAKPEILLLDEVFHKTMTR 295 PP K + ++P+ + + L + D+ L ++A +A EI+ L K +++ Sbjct: 241 PPMLKMVLKFPNLLLDLFFMAWLRTKMVRDMMLPDYANNANNEIVQLSNDLMKFLSQ 297 >Q73QU0.1 Q73QU0_TREDE Lipase/acylhydrolase, GDSL family Length = 531 Score = 181 bits (460), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 100/279 (35%), Positives = 164/279 (58%), Gaps = 6/279 (2%) Query: 7 RILIFGAGVIGSVYALRFAQSGLDVTLLARGKRLETLQRNGLRYNDNGAVQQISVRTIEK 66 ++LI+GAGVIGS+YA FA++G D T+ ARGK+LETL+ GL Y NG + V+ I Sbjct: 2 KLLIYGAGVIGSLYAAAFAEAGYDTTVYARGKKLETLKTRGLLYEKNGKQYKAKVKIIAT 61 Query: 67 LVNDDIYDFIFVPVRYDQAESALSAIKNNQSQTIITLTNTV-GYDSWLKIVGD-RLLPGF 124 L NDDIYDFIF+ V+ +Q +AL ++ N S I+T+ NT+ Y W + G+ R++P F Sbjct: 62 LQNDDIYDFIFLTVKENQVHTALEELRPNGSPNIVTMVNTLEPYADWENLCGEGRIIPAF 121 Query: 125 PGAGGDIKDDVLYAQFGSETWQGTIFGEINGQVTERVKELAAILETAGLHYEILHNIQAF 184 PGAGG +D VL A F Q T F EI G +ER+K+LAA+ + AG+ Y I+ ++ + Sbjct: 122 PGAGGSYEDGVLKADFTPSLIQATTFAEIGGNSSERLKKLAALFKMAGVPYRIVKDMHGW 181 Query: 185 HVSHAAL-AAVNKHFYANDGMVDITAARSEVILSKLAADVKQNIRLVEQAGIPVIPPETK 243 + H AL + +Y + ++ + I++ A +K N + + ++G+ + PP+ Sbjct: 182 QLYHLALVVPIADAYYKAENPEEVW--KEADIMNDTARQIKNNFQKLYRSGVKLSPPKMH 239 Query: 244 AMGEWPDEDIISHYRQMLSNDFIIDVKLGNHAVSAKPEI 282 + P + + + Q+ + F ++ + H++ A E+ Sbjct: 240 LLRLLPAPVLQAIFTQVFKSRF-GNLFMYRHSMKASDEM 277 >C0B6U5.1 C0B6U5_9FIRM Putative uncharacterized protein Length = 315 Score = 175 bits (443), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 108/299 (36%), Positives = 165/299 (55%), Gaps = 13/299 (4%) Query: 7 RILIFGAGVIGSVYALRFAQSGLDVTLLARGKRLETLQRNGLRYNDNGAVQQISVRTIEK 66 RILI+GAGVIGS+YA FA++G D ++ ARGKR E L+ NGL Y N V + +R + + Sbjct: 14 RILIYGAGVIGSLYAALFAEAGYDTSIYARGKRFEALRNNGLLYKKNQEVIKAEIRILGE 73 Query: 67 LVNDDIYDFIFVPVRYDQAESALSAIKNNQSQTIITLTNTV-GYDSWLKIVGD-RLLPGF 124 L NDDIYDF+ + VR +Q AL+ +KNN+S TI+T+ N++ Y+ W IVG R+LP F Sbjct: 74 LPNDDIYDFVLLTVRENQLYEALTELKNNKSNTIVTMINSLDSYNKWEDIVGKGRILPAF 133 Query: 125 PGAGGDIKDD-VLYAQFGSETWQGTIFGEINGQVTERVKELAAILETAGLHYEILHNIQA 183 PGAGG I DD +L A Q T F EI+G +ER K+ + IL A + Y+ + ++ Sbjct: 134 PGAGGSINDDGILDAALTPRLIQPTTFAEISGNKSERTKQFSEILRHAHIPYQKVTDMHL 193 Query: 184 FHVSHAAL-AAVNKHFYANDGMVDITAARSEVILSKLAADVKQNIRLVEQAGIPVIPPET 242 + + H A+ + +Y +D + + I+ K A +K+N + + + P + Sbjct: 194 WQLCHLAMVVPIADAYYESDDPEKV--EKEWKIMRKTAERLKRNFNFLRKQKGKLSPWKM 251 Query: 243 KAMGEWPDEDIISHYRQMLSNDF---IIDVKLGNHAVSAKPEILLLDEVFHKTMTRLAQ 298 P +S ML+ F D + HA+ A E+ L + F+ M R+ + Sbjct: 252 NIFRFLP----LSFLTIMLAVTFGSSFGDKFMYQHAMKAPDEMRELHKQFYAYMKRMKK 306 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.137 0.390 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,738,109,508 Number of extensions: 71435400 Number of successful extensions: 238578 Number of sequences better than 1.0e-05: 88 Number of HSP's gapped: 238628 Number of HSP's successfully gapped: 88 Length of query: 298 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 163 Effective length of database: 1,788,859,178 Effective search space: 291584046014 Effective search space used: 291584046014 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)