BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0373.0002.p
         (83 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

P31835.1 CDGT2_PAEMA Cyclomaltodextrin glucanotransferase EC=2.4...   136   6e-31
P04830.2 CDGT1_PAEMA Cyclomaltodextrin glucanotransferase EC=2.4...   129   8e-29
O52766.1 O52766_PAEMA Alpha-cyclodextrin glucanotransferase EC=2...   129   8e-29
P26827.2 CDGT_THETU Cyclomaltodextrin glucanotransferase EC=2.4....   127   2e-28
B2XY82.1 B2XY82_9BACL Cyclodextrin glycosyl transferase (Fragment)    124   3e-27

>P31835.1 CDGT2_PAEMA Cyclomaltodextrin glucanotransferase EC=2.4.1.19
          Length = 713

 Score =  136 bits (342), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 62/83 (74%), Positives = 71/83 (85%)

Query: 1   VYLVGNVAELGAWSTSDAIGPMYNVVEETYPTWYYDVSVPAGTPLQFKLIKSNGTTVTWE 60
           VYL GNVAELG W+ ++AIGPMYN VE +YPTWY+DVSVPA T LQFK IK NG+TVTWE
Sbjct: 631 VYLTGNVAELGNWTAANAIGPMYNQVEASYPTWYFDVSVPANTALQFKFIKVNGSTVTWE 690

Query: 61  GGSNHTYTSPTSGVGMVAVDWQN 83
           GG+NHT+TSP+SGV  V VDWQN
Sbjct: 691 GGNNHTFTSPSSGVATVTVDWQN 713


>P04830.2 CDGT1_PAEMA Cyclomaltodextrin glucanotransferase EC=2.4.1.19
          Length = 714

 Score =  129 bits (324), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 61/83 (73%), Positives = 65/83 (78%)

Query: 1   VYLVGNVAELGAWSTSDAIGPMYNVVEETYPTWYYDVSVPAGTPLQFKLIKSNGTTVTWE 60
           VYLVGN AELG+W  + AIGPMYN V   YP+WYYDVSVPAGT L FK IK  G TVTWE
Sbjct: 632 VYLVGNAAELGSWDPNKAIGPMYNQVIAKYPSWYYDVSVPAGTKLDFKFIKKGGGTVTWE 691

Query: 61  GGSNHTYTSPTSGVGMVAVDWQN 83
           GG NHTYT+P SGVG V VDWQN
Sbjct: 692 GGGNHTYTTPASGVGTVTVDWQN 714


>O52766.1 O52766_PAEMA Alpha-cyclodextrin glucanotransferase EC=2.4.1.19
          Length = 714

 Score =  129 bits (324), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 61/83 (73%), Positives = 65/83 (78%)

Query: 1   VYLVGNVAELGAWSTSDAIGPMYNVVEETYPTWYYDVSVPAGTPLQFKLIKSNGTTVTWE 60
           VYLVGN AELG+W  + AIGPMYN V   YP+WYYDVSVPAGT L FK IK  G TVTWE
Sbjct: 632 VYLVGNAAELGSWDPNKAIGPMYNQVIAKYPSWYYDVSVPAGTKLDFKFIKKGGGTVTWE 691

Query: 61  GGSNHTYTSPTSGVGMVAVDWQN 83
           GG NHTYT+P SGVG V VDWQN
Sbjct: 692 GGGNHTYTTPASGVGTVTVDWQN 714


>P26827.2 CDGT_THETU Cyclomaltodextrin glucanotransferase EC=2.4.1.19
          Length = 710

 Score =  127 bits (320), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 60/82 (73%), Positives = 65/82 (79%)

Query: 1   VYLVGNVAELGAWSTSDAIGPMYNVVEETYPTWYYDVSVPAGTPLQFKLIKSNGTTVTWE 60
           VYL GNVAELG W TS AIGPM+N V   YPTWYYDVSVPAGT +QFK IK NG T+TWE
Sbjct: 628 VYLTGNVAELGNWDTSKAIGPMFNQVVYQYPTWYYDVSVPAGTTIQFKFIKKNGNTITWE 687

Query: 61  GGSNHTYTSPTSGVGMVAVDWQ 82
           GGSNHTYT P+S  G V V+WQ
Sbjct: 688 GGSNHTYTVPSSSTGTVIVNWQ 709


>B2XY82.1 B2XY82_9BACL Cyclodextrin glycosyl transferase (Fragment)
          Length = 608

 Score =  124 bits (311), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/62 (95%), Positives = 59/62 (95%)

Query: 1   VYLVGNVAELGAWSTSDAIGPMYNVVEETYPTWYYDVSVPAGTPLQFKLIKSNGTTVTWE 60
           VYLVGNVAELGAWS S AIGPMYNVVEETYPTWYYDVSVPAGTPLQFKLIKSNG TVTWE
Sbjct: 547 VYLVGNVAELGAWSASGAIGPMYNVVEETYPTWYYDVSVPAGTPLQFKLIKSNGATVTWE 606

Query: 61  GG 62
           GG
Sbjct: 607 GG 608


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.312    0.130    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 586,666,791
Number of extensions: 21975844
Number of successful extensions: 35451
Number of sequences better than 1.0e-05: 139
Number of HSP's gapped: 35410
Number of HSP's successfully gapped: 141
Length of query: 83
Length of database: 3,060,696,203
Length adjustment: 53
Effective length of query: 30
Effective length of database: 2,561,382,408
Effective search space: 76841472240
Effective search space used: 76841472240
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 126 (53.1 bits)