BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0373.0001.p (529 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value P31835.1 CDGT2_PAEMA Cyclomaltodextrin glucanotransferase EC=2.4... 818 0.0 B2XY82.1 B2XY82_9BACL Cyclodextrin glycosyl transferase (Fragment) 811 0.0 O52766.1 O52766_PAEMA Alpha-cyclodextrin glucanotransferase EC=2... 789 0.0 P04830.2 CDGT1_PAEMA Cyclomaltodextrin glucanotransferase EC=2.4... 787 0.0 P26827.2 CDGT_THETU Cyclomaltodextrin glucanotransferase EC=2.4.... 705 0.0 >P31835.1 CDGT2_PAEMA Cyclomaltodextrin glucanotransferase EC=2.4.1.19 Length = 713 Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust. Identities = 381/470 (81%), Positives = 431/470 (91%) Query: 1 MVLGAAVPALADPATSVNNKVNYSTDVIYQIVTDRFVDGNPANNPTGAAFSSDHSNMKLY 60 + LGAA+P A P TSVNNK+N+STD +YQIVTDRFVDGN ANNPTGAAFSSDHSN+KLY Sbjct: 17 IALGAALPVWASPDTSVNNKLNFSTDTVYQIVTDRFVDGNSANNPTGAAFSSDHSNLKLY 76 Query: 61 FGGDWKGIINKINDGYLTGMGVTAIWISQPVENITSVVNYSGVNNTSYHGYWPRDFKKTN 120 FGGDW+GI NKINDGYLTGMG+TA+WISQPVENIT+V+NYSGVNNT+YHGYWPRDFKKTN Sbjct: 77 FGGDWQGITNKINDGYLTGMGITALWISQPVENITAVINYSGVNNTAYHGYWPRDFKKTN 136 Query: 121 AAFGSFTDFQNLISTAHANNIKVIIDFAPNHTSPASFTDPSFAENGALYNNGTLLGNYTN 180 AAFGSFTDF NLI+ AH++NIKV++DFAPNHT+PAS TDPSFAENGALYNNGTLLG Y+N Sbjct: 137 AAFGSFTDFSNLIAAAHSHNIKVVMDFAPNHTNPASSTDPSFAENGALYNNGTLLGKYSN 196 Query: 181 DSNGLFHHKGGTDFSTIEDGIYRNLYDLADINQNNNTIDKYFKEAIDLWLGLGVDGIRFD 240 D+ GLFHH GGTDFST E GIY+NLYDLADINQNNNTID Y KE+I LWL LGVDGIRFD Sbjct: 197 DTAGLFHHNGGTDFSTTESGIYKNLYDLADINQNNNTIDSYLKESIQLWLNLGVDGIRFD 256 Query: 241 AVKHMPFGWQKSLASSMYSSSHPVFTFGEWFLGPDETSPDNVKFANNSGMNLLDFAYAQE 300 AVKHMP GWQKS SS+YSS++PVFTFGEWFLGPDE + DN+ FAN SGM+LLDFA+AQE Sbjct: 257 AVKHMPQGWQKSYVSSIYSSANPVFTFGEWFLGPDEMTQDNINFANQSGMHLLDFAFAQE 316 Query: 301 VREVFKDKSETMTDLNSVLESTASSYNYIHNMVTFIDNHDMDRFQAAGSSTRPTEQALAL 360 +REVF+DKSETMTDLNSV+ ST SSYNYI+NMVTFIDNHDMDRFQ AG+STRPTEQALA+ Sbjct: 317 IREVFRDKSETMTDLNSVISSTGSSYNYINNMVTFIDNHDMDRFQQAGASTRPTEQALAV 376 Query: 361 TLTSRGVPAIYYGTEQYMTGVGDPYNRAMMTGFNTNTTAYKLIKALAPLRKSNPAIAYGT 420 TLTSRGVPAIYYGTEQYMTG GDP NR MMTGF+TN TAYK+IKALAPLRKSNPA+AYG+ Sbjct: 377 TLTSRGVPAIYYGTEQYMTGNGDPNNRGMMTGFDTNKTAYKVIKALAPLRKSNPALAYGS 436 Query: 421 TTQRWVNNDVYIYERKFGNSVALVAINRNTSTPYPITNLLSSLPAGNYTD 470 TTQRWVN+DVY+YERKFG++VALVA+NR+++T YPI+ L++LP G YTD Sbjct: 437 TTQRWVNSDVYVYERKFGSNVALVAVNRSSTTAYPISGALTALPNGTYTD 486 >B2XY82.1 B2XY82_9BACL Cyclodextrin glycosyl transferase (Fragment) Length = 608 Score = 811 bits (2096), Expect = 0.0, Method: Compositional matrix adjust. Identities = 391/401 (97%), Positives = 396/401 (98%) Query: 70 NKINDGYLTGMGVTAIWISQPVENITSVVNYSGVNNTSYHGYWPRDFKKTNAAFGSFTDF 129 NKINDGYLTGMGVTAIWISQPVENITSVVNYSGVNNTSYHGYWPRDFKKTNAAFGSFTDF Sbjct: 1 NKINDGYLTGMGVTAIWISQPVENITSVVNYSGVNNTSYHGYWPRDFKKTNAAFGSFTDF 60 Query: 130 QNLISTAHANNIKVIIDFAPNHTSPASFTDPSFAENGALYNNGTLLGNYTNDSNGLFHHK 189 QNLISTAHANNIKVIIDFAPNHTSPAS + PSFAENGALY+NGTLLGNYTNDS GLFHHK Sbjct: 61 QNLISTAHANNIKVIIDFAPNHTSPASSSQPSFAENGALYDNGTLLGNYTNDSKGLFHHK 120 Query: 190 GGTDFSTIEDGIYRNLYDLADINQNNNTIDKYFKEAIDLWLGLGVDGIRFDAVKHMPFGW 249 GGTDFSTIEDGIYRNLYDLADINQNNNTIDKYFKEAIDLWLGLGVDGIRFDAVKHMPFGW Sbjct: 121 GGTDFSTIEDGIYRNLYDLADINQNNNTIDKYFKEAIDLWLGLGVDGIRFDAVKHMPFGW 180 Query: 250 QKSLASSMYSSSHPVFTFGEWFLGPDETSPDNVKFANNSGMNLLDFAYAQEVREVFKDKS 309 QKSLASSMYSS+HPVFTFGEWFLGPD+TSPDNVKFANNSGMNLLDFAYAQEVREV KDKS Sbjct: 181 QKSLASSMYSSNHPVFTFGEWFLGPDKTSPDNVKFANNSGMNLLDFAYAQEVREVLKDKS 240 Query: 310 ETMTDLNSVLESTASSYNYIHNMVTFIDNHDMDRFQAAGSSTRPTEQALALTLTSRGVPA 369 ETMTDLNSVLESTASSYNYIHNMVTFIDNHDMDRFQAAGSSTRPTEQALALTLTSRGVPA Sbjct: 241 ETMTDLNSVLESTASSYNYIHNMVTFIDNHDMDRFQAAGSSTRPTEQALALTLTSRGVPA 300 Query: 370 IYYGTEQYMTGVGDPYNRAMMTGFNTNTTAYKLIKALAPLRKSNPAIAYGTTTQRWVNND 429 IYYGTEQYMTGVGDP NRAMMTGFNTNTTAYKLIKALAPLRKSNPA+AYGTTTQRWVNND Sbjct: 301 IYYGTEQYMTGVGDPNNRAMMTGFNTNTTAYKLIKALAPLRKSNPALAYGTTTQRWVNND 360 Query: 430 VYIYERKFGNSVALVAINRNTSTPYPITNLLSSLPAGNYTD 470 VYIYERKFGNSVALVAINRNTSTPYPITNLLSSLPAGNYTD Sbjct: 361 VYIYERKFGNSVALVAINRNTSTPYPITNLLSSLPAGNYTD 401 >O52766.1 O52766_PAEMA Alpha-cyclodextrin glucanotransferase EC=2.4.1.19 Length = 714 Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/470 (79%), Positives = 411/470 (87%) Query: 1 MVLGAAVPALADPATSVNNKVNYSTDVIYQIVTDRFVDGNPANNPTGAAFSSDHSNMKLY 60 M LG ++PA A P TSV+NKVN+STDVIYQIVTDRF DG+ NNP G AFS D SN+KLY Sbjct: 17 MALGISLPAWASPDTSVDNKVNFSTDVIYQIVTDRFADGDRTNNPAGDAFSGDRSNLKLY 76 Query: 61 FGGDWKGIINKINDGYLTGMGVTAIWISQPVENITSVVNYSGVNNTSYHGYWPRDFKKTN 120 FGGDW+GII+KINDGYLTGMGVTA+WISQPVENITSV+ YSGVNNTSYHGYW RDFK+TN Sbjct: 77 FGGDWQGIIDKINDGYLTGMGVTALWISQPVENITSVIKYSGVNNTSYHGYWARDFKQTN 136 Query: 121 AAFGSFTDFQNLISTAHANNIKVIIDFAPNHTSPASFTDPSFAENGALYNNGTLLGNYTN 180 AFG F DFQNLI TAHA+NIKV+IDFAPNHTSPA +P FAENGALY+NG+LLG Y+N Sbjct: 137 DAFGDFADFQNLIDTAHAHNIKVVIDFAPNHTSPADRDNPGFAENGALYDNGSLLGAYSN 196 Query: 181 DSNGLFHHKGGTDFSTIEDGIYRNLYDLADINQNNNTIDKYFKEAIDLWLGLGVDGIRFD 240 D+ GLFHH GGTDFSTIEDGIY+NLYDLADIN NNN +D YFK AIDLWLG+GVDGIRFD Sbjct: 197 DTAGLFHHNGGTDFSTIEDGIYKNLYDLADINHNNNAMDAYFKSAIDLWLGMGVDGIRFD 256 Query: 241 AVKHMPFGWQKSLASSMYSSSHPVFTFGEWFLGPDETSPDNVKFANNSGMNLLDFAYAQE 300 AVKHMPFGWQKS SS+Y HPVFTFGEW+LG D+T DN+KFAN SGMNLLDF YAQE Sbjct: 257 AVKHMPFGWQKSFVSSIYGGDHPVFTFGEWYLGADQTDGDNIKFANESGMNLLDFEYAQE 316 Query: 301 VREVFKDKSETMTDLNSVLESTASSYNYIHNMVTFIDNHDMDRFQAAGSSTRPTEQALAL 360 VREVF+DK+ETM DL VL ST S Y+YI+NMVTFIDNHDMDRFQ AGS TR TEQALAL Sbjct: 317 VREVFRDKTETMKDLYEVLASTESQYDYINNMVTFIDNHDMDRFQVAGSGTRATEQALAL 376 Query: 361 TLTSRGVPAIYYGTEQYMTGVGDPYNRAMMTGFNTNTTAYKLIKALAPLRKSNPAIAYGT 420 TLTSRGVPAIYYGTEQYMTG GDP NRAMMT FNT TTAYK+I+ALAPLRKSNPAIAYGT Sbjct: 377 TLTSRGVPAIYYGTEQYMTGDGDPNNRAMMTSFNTGTTAYKVIQALAPLRKSNPAIAYGT 436 Query: 421 TTQRWVNNDVYIYERKFGNSVALVAINRNTSTPYPITNLLSSLPAGNYTD 470 TT+RWVNNDV I ERKFG+S ALVAINRN+S YPI+ LLSSLPAG Y+D Sbjct: 437 TTERWVNNDVLIIERKFGSSAALVAINRNSSAAYPISGLLSSLPAGTYSD 486 >P04830.2 CDGT1_PAEMA Cyclomaltodextrin glucanotransferase EC=2.4.1.19 Length = 714 Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust. Identities = 373/470 (79%), Positives = 410/470 (87%) Query: 1 MVLGAAVPALADPATSVNNKVNYSTDVIYQIVTDRFVDGNPANNPTGAAFSSDHSNMKLY 60 M LG ++PA A P TSV+NKVN+STDVIYQIVTDRF DG+ NNP G AFS D SN+KLY Sbjct: 17 MALGISLPAWASPDTSVDNKVNFSTDVIYQIVTDRFADGDRTNNPAGDAFSGDRSNLKLY 76 Query: 61 FGGDWKGIINKINDGYLTGMGVTAIWISQPVENITSVVNYSGVNNTSYHGYWPRDFKKTN 120 FGGDW+GII+KINDGYLTGMGVTA+WISQPVENITSV+ YSGVNNTSYHGYW RDFK+TN Sbjct: 77 FGGDWQGIIDKINDGYLTGMGVTALWISQPVENITSVIKYSGVNNTSYHGYWARDFKQTN 136 Query: 121 AAFGSFTDFQNLISTAHANNIKVIIDFAPNHTSPASFTDPSFAENGALYNNGTLLGNYTN 180 AFG F DFQNLI TAHA+NIKV+IDFAPNHTSPA +P FAENG +Y+NG+LLG Y+N Sbjct: 137 DAFGDFADFQNLIDTAHAHNIKVVIDFAPNHTSPADRDNPGFAENGGMYDNGSLLGAYSN 196 Query: 181 DSNGLFHHKGGTDFSTIEDGIYRNLYDLADINQNNNTIDKYFKEAIDLWLGLGVDGIRFD 240 D+ GLFHH GGTDFSTIEDGIY+NLYDLADIN NNN +D YFK AIDLWLG+GVDGIRFD Sbjct: 197 DTAGLFHHNGGTDFSTIEDGIYKNLYDLADINHNNNAMDAYFKSAIDLWLGMGVDGIRFD 256 Query: 241 AVKHMPFGWQKSLASSMYSSSHPVFTFGEWFLGPDETSPDNVKFANNSGMNLLDFAYAQE 300 AVKHMPFGWQKS SS+Y HPVFTFGEW+LG D+T DN+KFAN SGMNLLDF YAQE Sbjct: 257 AVKHMPFGWQKSFVSSIYGGDHPVFTFGEWYLGADQTDGDNIKFANESGMNLLDFEYAQE 316 Query: 301 VREVFKDKSETMTDLNSVLESTASSYNYIHNMVTFIDNHDMDRFQAAGSSTRPTEQALAL 360 VREVF+DK+ETM DL VL ST S Y+YI+NMVTFIDNHDMDRFQ AGS TR TEQALAL Sbjct: 317 VREVFRDKTETMKDLYEVLASTESQYDYINNMVTFIDNHDMDRFQVAGSGTRATEQALAL 376 Query: 361 TLTSRGVPAIYYGTEQYMTGVGDPYNRAMMTGFNTNTTAYKLIKALAPLRKSNPAIAYGT 420 TLTSRGVPAIYYGTEQYMTG GDP NRAMMT FNT TTAYK+I+ALAPLRKSNPAIAYGT Sbjct: 377 TLTSRGVPAIYYGTEQYMTGDGDPNNRAMMTSFNTGTTAYKVIQALAPLRKSNPAIAYGT 436 Query: 421 TTQRWVNNDVYIYERKFGNSVALVAINRNTSTPYPITNLLSSLPAGNYTD 470 TT+RWVNNDV I ERKFG+S ALVAINRN+S YPI+ LLSSLPAG Y+D Sbjct: 437 TTERWVNNDVLIIERKFGSSAALVAINRNSSAAYPISGLLSSLPAGTYSD 486 >P26827.2 CDGT_THETU Cyclomaltodextrin glucanotransferase EC=2.4.1.19 Length = 710 Score = 705 bits (1819), Expect = 0.0, Method: Compositional matrix adjust. Identities = 344/471 (73%), Positives = 395/471 (83%), Gaps = 3/471 (0%) Query: 1 MVLGAAVPALADPATSVNNKVNYSTDVIYQIVTDRFVDGNPANNPTGAAFSSDHSNMKLY 60 +V G P A T+V+N VNYSTDVIYQIVTDRFVDGN +NNPTG + H+++K Y Sbjct: 17 LVFGLTAPIQAASDTAVSNVVNYSTDVIYQIVTDRFVDGNTSNNPTGDLYDPTHTSLKKY 76 Query: 61 FGGDWKGIINKINDGYLTGMGVTAIWISQPVENITSVVNYSGVN-NTSYHGYWPRDFKKT 119 FGGDW+GIINKINDGYLTGMGVTAIWISQPVENI +V+ S +TSYHGYW RDFK+T Sbjct: 77 FGGDWQGIINKINDGYLTGMGVTAIWISQPVENIYAVLPDSTFGGSTSYHGYWARDFKRT 136 Query: 120 NAAFGSFTDFQNLISTAHANNIKVIIDFAPNHTSPASFTDPSFAENGALYNNGTLLGNYT 179 N FGSFTDFQNLI+TAHA+NIKVIIDFAPNHTSPAS TDP++AENG LY+NGTLLG YT Sbjct: 137 NPYFGSFTDFQNLINTAHAHNIKVIIDFAPNHTSPASETDPTYAENGRLYDNGTLLGGYT 196 Query: 180 NDSNGLFHHKGGTDFSTIEDGIYRNLYDLADINQNNNTIDKYFKEAIDLWLGLGVDGIRF 239 ND+NG FHH GGTDFS+ EDGIYRNL+DLAD+NQ N+TID Y K AI +WL +G+DGIR Sbjct: 197 NDTNGYFHHYGGTDFSSYEDGIYRNLFDLADLNQQNSTIDSYLKSAIKVWLDMGIDGIRL 256 Query: 240 DAVKHMPFGWQKSLASSMYSSSHPVFTFGEWFLGPDETSPDNVKFANNSGMNLLDFAYAQ 299 DAVKHMPFGWQK+ S+ S PVFTFGEWFLG +E +N FAN SGM+LLDF ++Q Sbjct: 257 DAVKHMPFGWQKNFMDSIL-SYRPVFTFGEWFLGTNEIDVNNTYFANESGMSLLDFRFSQ 315 Query: 300 EVREVFKDKSETMTDLNSVLESTASSYNYIHNMVTFIDNHDMDRFQAAGSSTRPTEQALA 359 +VR+VF+D ++TM L+S+++STAS YN+I++MVTFIDNHDMDRF G STRP EQALA Sbjct: 316 KVRQVFRDNTDTMYGLDSMIQSTASDYNFINDMVTFIDNHDMDRFYNGG-STRPVEQALA 374 Query: 360 LTLTSRGVPAIYYGTEQYMTGVGDPYNRAMMTGFNTNTTAYKLIKALAPLRKSNPAIAYG 419 TLTSRGVPAIYYGTEQYMTG GDPYNRAMMT FNT+TTAY +IK LAPLRKSNPAIAYG Sbjct: 375 FTLTSRGVPAIYYGTEQYMTGNGDPYNRAMMTSFNTSTTAYNVIKKLAPLRKSNPAIAYG 434 Query: 420 TTTQRWVNNDVYIYERKFGNSVALVAINRNTSTPYPITNLLSSLPAGNYTD 470 TT QRW+NNDVYIYERKFGN+VALVAINRN ST Y IT L ++LPAG YTD Sbjct: 435 TTQQRWINNDVYIYERKFGNNVALVAINRNLSTSYNITGLYTALPAGTYTD 485 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.132 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,250,124,839 Number of extensions: 143268511 Number of successful extensions: 404064 Number of sequences better than 1.0e-05: 2725 Number of HSP's gapped: 400713 Number of HSP's successfully gapped: 2898 Length of query: 529 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 388 Effective length of database: 1,732,333,088 Effective search space: 672145238144 Effective search space used: 672145238144 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 134 (56.2 bits)