BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0370.0045.p
         (412 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KE71.1 B3KE71_9BACI Peptidase M23B                                  221   1e-55
B0G8A1.1 B0G8A1_9FIRM Putative uncharacterized protein                148   9e-34
A1HSZ9.1 A1HSZ9_9FIRM Peptidase M23B                                  147   2e-33
B0NKL1.1 B0NKL1_EUBSP Putative uncharacterized protein                138   9e-31
A6BKP7.1 A6BKP7_9FIRM Putative uncharacterized protein                137   2e-30

>B3KE71.1 B3KE71_9BACI Peptidase M23B
          Length = 323

 Score =  221 bits (562), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 107/196 (54%), Positives = 140/196 (71%), Gaps = 14/196 (7%)

Query: 216 VGGEYIAVYQNDPLALVRETKDDYEEIRSMLDEMMSSITSTITEAKKANTAKADLQAKQA 275
           VGGE+IAV++N+ L L RET+DD+E ++ ++  M   I  T+ +A          Q  Q 
Sbjct: 142 VGGEFIAVHENEMLNLARETQDDFENMQQLISRMEQHIPRTLDQA----------QETQE 191

Query: 276 RAEKARLAPAVLWPTQSKVITSSFGYRSDPFKGVAAYHSGIDIAGSIGDPIYAAMDGVVT 335
           R E     P+ LWPT SK +TS+FGYRSDPF G +AYH+GIDIAG  GDPIYAA  G VT
Sbjct: 192 RREGT---PS-LWPTTSKRLTSNFGYRSDPFTGRSAYHAGIDIAGKTGDPIYAAGAGEVT 247

Query: 336 AAEQMGARGKYIILQHDNGLETWYMHLNTMLVAPGTKVSKGQKIALLGNTGRSTGPHLHF 395
           AAE+ GARG YI+++H NGLETWYMHL+++ V+ G  V +G+ I  LG++GRSTGPHLHF
Sbjct: 248 AAERSGARGLYIVIRHPNGLETWYMHLDSLDVSAGDHVEQGETIGKLGSSGRSTGPHLHF 307

Query: 396 QVVKQNKPVNPLGYVQ 411
           QVVK N+ ++PL Y+Q
Sbjct: 308 QVVKNNQTIDPLPYLQ 323


>B0G8A1.1 B0G8A1_9FIRM Putative uncharacterized protein
          Length = 377

 Score =  148 bits (374), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 65/116 (56%), Positives = 79/116 (68%)

Query: 295 ITSSFGYRSDPFKGVAAYHSGIDIAGSIGDPIYAAMDGVVTAAEQMGARGKYIILQHDNG 354
           I+S+FGYR+ P  G +  H G+D A S G PIYAA  G VT+A   G  G  II+ H NG
Sbjct: 262 ISSTFGYRNAPLAGASTNHKGVDFAASTGTPIYAAAAGTVTSAGYSGKAGNLIIINHGNG 321

Query: 355 LETWYMHLNTMLVAPGTKVSKGQKIALLGNTGRSTGPHLHFQVVKQNKPVNPLGYV 410
           L T+YMH NT+ V+ G KVSKGQ I  +G TG STGPHLHFQV+   KPVNP+ Y+
Sbjct: 322 LLTYYMHCNTIFVSAGQKVSKGQNIGQVGTTGNSTGPHLHFQVMNNGKPVNPMNYL 377


>A1HSZ9.1 A1HSZ9_9FIRM Peptidase M23B
          Length = 373

 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 71/141 (50%), Positives = 91/141 (64%), Gaps = 1/141 (0%)

Query: 270 LQAKQARAEKARLAPAVLWPTQSKVITSSFGYRSDPFKGVAAYHSGIDIAGSIGDPIYAA 329
           L++KQ     A    A+LWP  S  ITS FG+R+ P  G A +HSGIDI    GDP+ AA
Sbjct: 233 LRSKQTGGRAAESTGAMLWPA-SGPITSPFGWRTHPIFGTARFHSGIDIGADYGDPVAAA 291

Query: 330 MDGVVTAAEQMGARGKYIILQHDNGLETWYMHLNTMLVAPGTKVSKGQKIALLGNTGRST 389
             GVV  A+ MG  GK +I+ H  G+ T Y H + +LV+ G +V KGQ IA +G+TG ST
Sbjct: 292 DGGVVVYADWMGGYGKTVIIDHGGGISTLYAHNSELLVSEGQRVRKGQPIARVGSTGYST 351

Query: 390 GPHLHFQVVKQNKPVNPLGYV 410
           GPHLHF+V +   PVNPLGY+
Sbjct: 352 GPHLHFEVRQNGSPVNPLGYL 372


>B0NKL1.1 B0NKL1_EUBSP Putative uncharacterized protein
          Length = 369

 Score =  138 bits (348), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 63/116 (54%), Positives = 73/116 (62%)

Query: 295 ITSSFGYRSDPFKGVAAYHSGIDIAGSIGDPIYAAMDGVVTAAEQMGARGKYIILQHDNG 354
           I+S FGYR  P  G +  H GID A  IG PIYAA  G V +A   G  GK I++ H NG
Sbjct: 254 ISSPFGYREQPLAGASTNHKGIDYAAGIGTPIYAAAAGTVVSAGYSGNAGKMIVINHGNG 313

Query: 355 LETWYMHLNTMLVAPGTKVSKGQKIALLGNTGRSTGPHLHFQVVKQNKPVNPLGYV 410
           L T+YMH N + V+ G  VSKGQ IA +G TG STGPHLHFQV     PVNP  Y+
Sbjct: 314 LTTYYMHCNDLYVSAGQSVSKGQNIAAVGTTGNSTGPHLHFQVNLNGTPVNPANYL 369


>A6BKP7.1 A6BKP7_9FIRM Putative uncharacterized protein
          Length = 388

 Score =  137 bits (344), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 60/122 (49%), Positives = 76/122 (62%)

Query: 289 PTQSKVITSSFGYRSDPFKGVAAYHSGIDIAGSIGDPIYAAMDGVVTAAEQMGARGKYII 348
           P     I+S FGYR+ P  G +  H GID A + G PIYAA  G V +A   G  G  ++
Sbjct: 267 PCPGGYISSGFGYRTQPIAGASTNHKGIDFAAATGTPIYAAAAGTVISAGYAGNAGNLLV 326

Query: 349 LQHDNGLETWYMHLNTMLVAPGTKVSKGQKIALLGNTGRSTGPHLHFQVVKQNKPVNPLG 408
           + H NGL T+YMH N + V+ G KVS+GQ +A +G TG STGPHLHFQV+    PVNP  
Sbjct: 327 ISHGNGLLTYYMHCNAIYVSAGQKVSRGQNVAAVGTTGNSTGPHLHFQVMLNGTPVNPAN 386

Query: 409 YV 410
           Y+
Sbjct: 387 YL 388


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.315    0.130    0.363 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,636,517,049
Number of extensions: 55069811
Number of successful extensions: 237618
Number of sequences better than 1.0e-05: 4576
Number of HSP's gapped: 234962
Number of HSP's successfully gapped: 4576
Length of query: 412
Length of database: 3,060,696,203
Length adjustment: 138
Effective length of query: 274
Effective length of database: 1,760,596,133
Effective search space: 482403340442
Effective search space used: 482403340442
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 132 (55.5 bits)