BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0370.0039.p
         (268 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K624.1 B3K624_9BACI Putative uncharacterized protein                 64   2e-08

>B3K624.1 B3K624_9BACI Putative uncharacterized protein
          Length = 260

 Score = 63.5 bits (153), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 21/205 (10%)

Query: 35  RSKSTAPVVQIVKTDPSIQQLLDKEYAVKLQTGEIRVGYINHAKSNPDDTLDFSYMPYRF 94
           ++ S  P  +IV  D  I+ L+++     L+ G++   Y    + N  D + F+   + F
Sbjct: 35  KTMSAKPEKRIVSYDDQIKDLVNR-----LKPGQMIAYYAADQEYNRADQIFFTSKGFAF 89

Query: 95  ADISEAAQKQLALTGKTLEEPGDLPEGFVFQEALLEPYIPFFLGPDYKKLKNQLKAEAVA 154
              ++   K  A+    L +P  LP+G+ F+ A++    P      YKKL  +LK +A A
Sbjct: 90  TKYTDYLAKSKAMKAPALTKPAALPKGYTFKNAVVYLKSPERTSSLYKKLDQELKGKA-A 148

Query: 155 SGKKVIFKKY--KWTSGSAMLTYTKGAERIRFHYGPAAVLPE---GATYAILPGDEP--- 206
            G+K ++        + +A+L Y KG  +++     + ++PE   G T   +P D+P   
Sbjct: 149 KGEKFVYSDIIKANEASAAILNYEKG--KVKLQVVASDIVPEQPIGGT--PVPQDKPNES 204

Query: 207 -EDLIINGREAVYTK--FGPHHGDF 228
            E ++ING E VYT    G  H D+
Sbjct: 205 KETIVINGVECVYTADLKGRDHLDW 229


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.315    0.133    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,526,184,639
Number of extensions: 65278610
Number of successful extensions: 107698
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 107699
Number of HSP's successfully gapped: 2
Length of query: 268
Length of database: 3,060,696,203
Length adjustment: 133
Effective length of query: 135
Effective length of database: 1,807,701,208
Effective search space: 244039663080
Effective search space used: 244039663080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 130 (54.7 bits)