BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0370.0033.p (279 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KE57.1 B3KE57_9BACI Peptidase M22 glycoprotease 231 7e-59 B1DH37.1 B1DH37_9BACL Peptidase M22 glycoprotease 177 1e-42 Q81VE9.1 Q81VE9_BACAN Putative uncharacterized protein 127 1e-27 C3PAU4.1 C3PAU4_BACAA Putative uncharacterized protein 127 1e-27 C3L4Z9.1 C3L4Z9_BACAC Putative uncharacterized protein 127 1e-27 >B3KE57.1 B3KE57_9BACI Peptidase M22 glycoprotease Length = 263 Score = 231 bits (588), Expect = 7e-59, Method: Compositional matrix adjust. Identities = 132/269 (49%), Positives = 165/269 (61%), Gaps = 18/269 (6%) Query: 7 EPRKRFLALDTSTAILGVAITENGRLLHETNASGERNHSVHLLPIIEQALQATGTTPAMI 66 +P++RFLALDTSTA L V++ E +LL E N + +RNHSVHL P+++QAL G + Sbjct: 7 KPQQRFLALDTSTASLAVSVMEQDKLLSEVNTNADRNHSVHLHPVMDQALAEAGIGMDQV 66 Query: 67 GGIAVGLGPGSYTGTRIAVTAAKTLAWAWKVPVAGISTXXXXXXXXXXXXXKQQVEPSGA 126 GIAVG+GPGSYTG RIAVTAAKTLAWA ++PV G+S+ SG Sbjct: 67 DGIAVGVGPGSYTGIRIAVTAAKTLAWANQLPVVGVSSLHALAWGGLK---------SGW 117 Query: 127 GEPAEQEPAGTGPDWIIPLLDARRGQAYTALFAADGE---HAPRRLEPDAIRLMADWVLD 183 E A ++ G W++PLLDARRGQ YTALFAAD + AP R+E D IRLM WV Sbjct: 118 SETAAEK----GVHWVVPLLDARRGQVYTALFAADSKRQAEAPVRMETDGIRLMQSWVEA 173 Query: 184 LTDRLKQAEAEGRKPRAIWFVXXXXXXXXXXXXXXXRETGNVLVVPYELEGRWAGYLGEE 243 + +R+ + E R P IWF+ + + PY LEGRW GYLG Sbjct: 174 IEERISKLPEEER-PVCIWFIGEVELHAEAARGLEPWFGDRLRIHPYSLEGRWMGYLGAA 232 Query: 244 RLQAGN-DDLHSLIPNYTQLSEAEANLRR 271 RL AG D +H+L+PNYTQLSEAEANL R Sbjct: 233 RLLAGEADAVHTLVPNYTQLSEAEANLLR 261 >B1DH37.1 B1DH37_9BACL Peptidase M22 glycoprotease Length = 273 Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 113/283 (39%), Positives = 146/283 (51%), Gaps = 22/283 (7%) Query: 1 MMKLNVEPRKRFLALDTSTAILGVAITENGRLLHETNASGERNHSVHLLPIIEQALQATG 60 M + NV P LA DTSTA AI + GR+L + + ERNHSVH++ I+Q ++ G Sbjct: 1 MTERNVGP---VLAFDTSTAAFAAAILDKGRILGDMQSLAERNHSVHVITHIKQLMEQCG 57 Query: 61 TTPAMIGGIAVGLGPGSYTGTRIAVTAAKTLAWAWKVPVAGISTXXXXXXXXXXXXXKQQ 120 +G IAVG GPGSYTG RIAV AAKTLAW W P+ +S+ Q Sbjct: 58 VASKDVGAIAVGSGPGSYTGMRIAVAAAKTLAWVWDKPLVSVSSLEAIAYGGWHHAAGVQ 117 Query: 121 VEPSGAGEPAEQEPAGTGPDWIIPLLDARRGQAYTALFAADGEHAPRRLEPDAIRLMADW 180 + + A AGTG DWI+P++DARRGQ YT +A D +RLM DW Sbjct: 118 LGAASA------SGAGTGEDWILPIMDARRGQVYTGGYAMSAGGEWSGFAADGVRLMHDW 171 Query: 181 VLDLTDRL--KQAEAEGRKPRAIWFVXXXX-----XXXXXXXXXXXRETGNVLVVPYELE 233 V DR+ + A +G+ R IW + + +V ++ YELE Sbjct: 172 V----DRIAGEAALRQGQVKR-IWVIGDLALHREEAERLQALCGENKSGADVQLLSYELE 226 Query: 234 GRWAGYLGEERLQAGN-DDLHSLIPNYTQLSEAEANLRRSGEG 275 GR +LG RL G D H L PNYTQL+EAE NLR +G Sbjct: 227 GRALAWLGRGRLLKGEIADTHGLTPNYTQLAEAEVNLRAKQQG 269 >Q81VE9.1 Q81VE9_BACAN Putative uncharacterized protein Length = 230 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 122/256 (47%), Gaps = 36/256 (14%) Query: 11 RFLALDTSTAILGVAITENGRLLHETNASGERNHSVHLLPIIEQALQATGTTPAMIGGIA 70 + LA+DTS ++GV++ E G ++ E + +NHSV L+P +EQ L+ G P + I Sbjct: 2 KVLAIDTSNYVMGVSLIEEGNVIGEIITNLTKNHSVRLMPAVEQLLKECGVKPKELTKIV 61 Query: 71 VGLGPGSYTGTRIAVTAAKTLAWAWKVPVAGISTXXXXXXXXXXXXXKQQVEPSGAGEPA 130 V GPGSYTG RI VTAAKTLAW+ ++P+ G+S+ + V +GA Sbjct: 62 VAAGPGSYTGVRIGVTAAKTLAWSLQIPIVGVSSL-------------EVVAANGANFNG 108 Query: 131 EQEPAGTGPDWIIPLLDARRGQAYTALFAADGEHAPRRLEPDAIRLMADWVLDLTDRLKQ 190 I PL D RRGQ YT L+ +GE +E D I L+ DW+ L D+ K Sbjct: 109 ----------LISPLFDGRRGQIYTGLYTYEGEDL-TSIEEDRIILIVDWLQMLKDKGKP 157 Query: 191 AEAEGRKPRAIWFVXXXXXXXXXXXXXXXRETGNVLVVPYELEGRWAGYLGEERLQAGND 250 G + + P EL +LG LQ Sbjct: 158 VLFIGNDVKLHKETIIEHLGDQAVFAPVTKNNPR----PSEL-----AFLG---LQKEEQ 205 Query: 251 DLHSLIPNYTQLSEAE 266 D+HS +P+Y +L+EAE Sbjct: 206 DVHSFVPSYLRLAEAE 221 >C3PAU4.1 C3PAU4_BACAA Putative uncharacterized protein Length = 230 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 122/256 (47%), Gaps = 36/256 (14%) Query: 11 RFLALDTSTAILGVAITENGRLLHETNASGERNHSVHLLPIIEQALQATGTTPAMIGGIA 70 + LA+DTS ++GV++ E G ++ E + +NHSV L+P +EQ L+ G P + I Sbjct: 2 KVLAIDTSNYVMGVSLIEEGNVIGEIITNLTKNHSVRLMPAVEQLLKECGVKPKELTKIV 61 Query: 71 VGLGPGSYTGTRIAVTAAKTLAWAWKVPVAGISTXXXXXXXXXXXXXKQQVEPSGAGEPA 130 V GPGSYTG RI VTAAKTLAW+ ++P+ G+S+ + V +GA Sbjct: 62 VAAGPGSYTGVRIGVTAAKTLAWSLQIPIVGVSSL-------------EVVAANGANFNG 108 Query: 131 EQEPAGTGPDWIIPLLDARRGQAYTALFAADGEHAPRRLEPDAIRLMADWVLDLTDRLKQ 190 I PL D RRGQ YT L+ +GE +E D I L+ DW+ L D+ K Sbjct: 109 ----------LISPLFDGRRGQIYTGLYTYEGEDL-TSIEEDRIILIVDWLQMLKDKGKP 157 Query: 191 AEAEGRKPRAIWFVXXXXXXXXXXXXXXXRETGNVLVVPYELEGRWAGYLGEERLQAGND 250 G + + P EL +LG LQ Sbjct: 158 VLFIGNDVKLHKETIIEHLGDQAVFAPVTKNNPR----PSEL-----AFLG---LQKEEQ 205 Query: 251 DLHSLIPNYTQLSEAE 266 D+HS +P+Y +L+EAE Sbjct: 206 DVHSFVPSYLRLAEAE 221 >C3L4Z9.1 C3L4Z9_BACAC Putative uncharacterized protein Length = 230 Score = 127 bits (318), Expect = 1e-27, Method: Compositional matrix adjust. Identities = 86/256 (33%), Positives = 122/256 (47%), Gaps = 36/256 (14%) Query: 11 RFLALDTSTAILGVAITENGRLLHETNASGERNHSVHLLPIIEQALQATGTTPAMIGGIA 70 + LA+DTS ++GV++ E G ++ E + +NHSV L+P +EQ L+ G P + I Sbjct: 2 KVLAIDTSNYVMGVSLIEEGNVIGEIITNLTKNHSVRLMPAVEQLLKECGVKPKELTKIV 61 Query: 71 VGLGPGSYTGTRIAVTAAKTLAWAWKVPVAGISTXXXXXXXXXXXXXKQQVEPSGAGEPA 130 V GPGSYTG RI VTAAKTLAW+ ++P+ G+S+ + V +GA Sbjct: 62 VAAGPGSYTGVRIGVTAAKTLAWSLQIPIVGVSSL-------------EVVAANGANFNG 108 Query: 131 EQEPAGTGPDWIIPLLDARRGQAYTALFAADGEHAPRRLEPDAIRLMADWVLDLTDRLKQ 190 I PL D RRGQ YT L+ +GE +E D I L+ DW+ L D+ K Sbjct: 109 ----------LISPLFDGRRGQIYTGLYTYEGEDL-TSIEEDRIILIVDWLQMLKDKGKP 157 Query: 191 AEAEGRKPRAIWFVXXXXXXXXXXXXXXXRETGNVLVVPYELEGRWAGYLGEERLQAGND 250 G + + P EL +LG LQ Sbjct: 158 VLFIGNDVKLHKETIIEHLGDQAVFAPVTKNNPR----PSEL-----AFLG---LQKEEQ 205 Query: 251 DLHSLIPNYTQLSEAE 266 D+HS +P+Y +L+EAE Sbjct: 206 DVHSFVPSYLRLAEAE 221 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.133 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,641,379,777 Number of extensions: 66086542 Number of successful extensions: 127593 Number of sequences better than 1.0e-05: 979 Number of HSP's gapped: 127243 Number of HSP's successfully gapped: 979 Length of query: 279 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 145 Effective length of database: 1,798,280,193 Effective search space: 260750627985 Effective search space used: 260750627985 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 130 (54.7 bits)