BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0370.0023.p
         (171 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1DH52.1 B1DH52_9BACL Molybdenum cofactor biosynthesis protein C      199   6e-50
Q9K8I3.1 MOAC_BACHD Molybdenum cofactor biosynthesis protein C        152   1e-35
Q88WW9.1 MOAC_LACPL Molybdenum cofactor biosynthesis protein C        148   2e-34
C0GEX9.1 C0GEX9_9FIRM Molybdenum cofactor biosynthesis protein C      147   4e-34
C3WBL8.1 C3WBL8_FUSMR Molybdenum cofactor biosynthesis protein C      146   6e-34

>B1DH52.1 B1DH52_9BACL Molybdenum cofactor biosynthesis protein C
          Length = 155

 Score =  199 bits (507), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 94/115 (81%), Positives = 103/115 (89%)

Query: 1   MELTHFNEQGRARMVDVSDKEITKRTAAARSSVEMAPGTLAAIKAGRIGKGDVLAVAQVA 60
           MELTHFNEQGRARMVDVSDKE+T RTA AR+ V+M PGTLA IK G IGKGDVLAV+QVA
Sbjct: 1   MELTHFNEQGRARMVDVSDKEVTARTATARTQVKMNPGTLARIKEGSIGKGDVLAVSQVA 60

Query: 61  GIMAAKKTADWIPMCHPLPLTGIDIRFWDNSEDRLYIEATVKTTGKTGVEMEALT 115
            IMAAKKT+DWIPMCHPLPLTG+++ F DN +D LYIEATVKTTGKTGVEMEALT
Sbjct: 61  AIMAAKKTSDWIPMCHPLPLTGVNVTFGDNGQDELYIEATVKTTGKTGVEMEALT 115


>Q9K8I3.1 MOAC_BACHD Molybdenum cofactor biosynthesis protein C
          Length = 165

 Score =  152 bits (383), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 73/114 (64%), Positives = 91/114 (79%), Gaps = 3/114 (2%)

Query: 2   ELTHFNEQGRARMVDVSDKEITKRTAAARSSVEMAPGTLAAIKAGRIGKGDVLAVAQVAG 61
           + THFNEQGRA+MVD+S+K IT+RTA A+SSVE+       I  G+I KGDVLAVAQ+AG
Sbjct: 3   DFTHFNEQGRAKMVDISEKSITERTAVAKSSVEVNKEIYEKIIGGKIRKGDVLAVAQIAG 62

Query: 62  IMAAKKTADWIPMCHPLPLTGIDIRF-WDNSEDR--LYIEATVKTTGKTGVEME 112
           +MAAK T+ WIPMCHPL LTG+DI F W+ + +   L+IEA+VKTTG+TGVEME
Sbjct: 63  VMAAKNTSQWIPMCHPLSLTGVDISFEWEETRNHYLLHIEASVKTTGRTGVEME 116


>Q88WW9.1 MOAC_LACPL Molybdenum cofactor biosynthesis protein C
          Length = 163

 Score =  148 bits (373), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/113 (61%), Positives = 85/113 (75%)

Query: 2   ELTHFNEQGRARMVDVSDKEITKRTAAARSSVEMAPGTLAAIKAGRIGKGDVLAVAQVAG 61
           +LTHFN+Q RA+MVDV+DK +T R A A   + M P TL  I  G+I KGDVLAVAQVAG
Sbjct: 4   QLTHFNDQNRAKMVDVTDKAVTHRVATATGQITMHPATLQRIHDGQIKKGDVLAVAQVAG 63

Query: 62  IMAAKKTADWIPMCHPLPLTGIDIRFWDNSEDRLYIEATVKTTGKTGVEMEAL 114
           IMAAK+T+  IPMCH +PLTG+DI F DN +D + ++A VKT   TGVE+EAL
Sbjct: 64  IMAAKQTSSLIPMCHLIPLTGVDIHFTDNGQDTITVDALVKTKHVTGVEIEAL 116


>C0GEX9.1 C0GEX9_9FIRM Molybdenum cofactor biosynthesis protein C
          Length = 167

 Score =  147 bits (370), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 76/115 (66%), Positives = 86/115 (74%), Gaps = 1/115 (0%)

Query: 2   ELTHFNEQGRARMVDVSDKEITKRTAAARSSVEMAPGTLAAIKAGRIGKGDVLAVAQVAG 61
           +LTH NEQGRA+MVDVS K  TKR A  R  ++M P TL  I AG I KGDVLAVAQVAG
Sbjct: 3   KLTHINEQGRAKMVDVSAKNSTKRVAVVRGEIKMKPETLERIAAGGIAKGDVLAVAQVAG 62

Query: 62  IMAAKKTADWIPMCHPLPLTGIDIRF-WDNSEDRLYIEATVKTTGKTGVEMEALT 115
           +MAAK TA  IPMCHPL LT +DI+F  D  +  + IEATV TTG+TGVEMEALT
Sbjct: 63  VMAAKDTARLIPMCHPLFLTSVDIKFDLDREQSLVEIEATVGTTGQTGVEMEALT 117


>C3WBL8.1 C3WBL8_FUSMR Molybdenum cofactor biosynthesis protein C
          Length = 154

 Score =  146 bits (369), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 75/115 (65%), Positives = 88/115 (76%), Gaps = 1/115 (0%)

Query: 1   MELTHFNEQGRARMVDVSDKEITKRTAAARSSVEMAPGTLAAIKAGRIGKGDVLAVAQVA 60
           ME THFNE+GRARMVDVS+K  T+R A AR  ++M P T+  I  G++ KGDVL+VAQV 
Sbjct: 1   MEFTHFNEKGRARMVDVSEKNETQRRAIARGYIQMNPETIKMINEGKMKKGDVLSVAQVG 60

Query: 61  GIMAAKKTADWIPMCHPLPLTGIDIRFWDNSEDRLYIEATVKTTGKTGVEMEALT 115
           GI  AKKT D IPMCH + LTG DI F +  EDR++IEA VKTTGKTGVEMEALT
Sbjct: 61  GICGAKKTWDLIPMCHNILLTGADISF-EVEEDRVWIEAVVKTTGKTGVEMEALT 114


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.133    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 935,844,942
Number of extensions: 32816610
Number of successful extensions: 97484
Number of sequences better than 1.0e-05: 1224
Number of HSP's gapped: 96300
Number of HSP's successfully gapped: 1225
Length of query: 171
Length of database: 3,060,696,203
Length adjustment: 126
Effective length of query: 45
Effective length of database: 1,873,648,313
Effective search space: 84314174085
Effective search space used: 84314174085
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)