BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0370.0022.p (161 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KE49.1 B3KE49_9BACI Molybdenum cofactor synthesis domain protein 266 5e-70 B1DH53.1 B1DH53_9BACL Molybdenum cofactor synthesis domain protein 214 2e-54 Q2RGL5.1 Q2RGL5_MOOTA Molybdopterin adenylyltransferase 156 6e-37 C0GH94.1 C0GH94_9FIRM Molybdenum cofactor synthesis domain protein 146 5e-34 B1I5T6.1 B1I5T6_DESAP Molybdenum cofactor synthesis domain 144 2e-33 >B3KE49.1 B3KE49_9BACI Molybdenum cofactor synthesis domain protein Length = 163 Score = 266 bits (680), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 127/161 (78%), Positives = 141/161 (87%) Query: 1 MAWKTAILTASDKGARGEREDTSAQVXXXXXXXXXXXXXXXXXIVPDEQDEIIAALIELT 60 M WKTAILTASDKG+RGEREDTSAQV IVPDEQDEIIAALIELT Sbjct: 1 MVWKTAILTASDKGSRGEREDTSAQVIRELVEEELSGEIIEYRIVPDEQDEIIAALIELT 60 Query: 61 DYFQADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRSTVMQKNRAVMLFRGICG 120 DY+Q DLVLTTGGT+LA+RDVTPEAT+RVIEREVPG++EAMR+TVMQKNR+ MLFRG+CG Sbjct: 61 DYYQVDLVLTTGGTELAVRDVTPEATKRVIEREVPGIAEAMRATVMQKNRSAMLFRGVCG 120 Query: 121 IRGRTLIVNLPGTPKGVHENLAAIMDQLPEALLMVTGQYRQ 161 +RGRTLIVNLPG+PKGVHENLAA+MDQLPEALLMVTGQYR+ Sbjct: 121 VRGRTLIVNLPGSPKGVHENLAAVMDQLPEALLMVTGQYRE 161 >B1DH53.1 B1DH53_9BACL Molybdenum cofactor synthesis domain protein Length = 163 Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 106/159 (66%), Positives = 124/159 (77%) Query: 1 MAWKTAILTASDKGARGEREDTSAQVXXXXXXXXXXXXXXXXXIVPDEQDEIIAALIELT 60 M WK AILTASDKG+RGEREDTSAQV IVPDEQDEI+AA+IE+T Sbjct: 1 MRWKVAILTASDKGSRGEREDTSAQVIRELVEEELGGEIVDYRIVPDEQDEIMAAIIEMT 60 Query: 61 DYFQADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRSTVMQKNRAVMLFRGICG 120 +Y+QADLVLTTGGT LA RDVTPEAT +V++R VPG+SEAMR +QK R ML RG+CG Sbjct: 61 EYYQADLVLTTGGTGLAQRDVTPEATLKVVDRLVPGISEAMRMGALQKTRRAMLSRGVCG 120 Query: 121 IRGRTLIVNLPGTPKGVHENLAAIMDQLPEALLMVTGQY 159 IRG+ LI+NLPG+PKGVHE+L AIMDQLP AL +VTG + Sbjct: 121 IRGQALIINLPGSPKGVHESLMAIMDQLPHALEIVTGTH 159 >Q2RGL5.1 Q2RGL5_MOOTA Molybdopterin adenylyltransferase Length = 162 Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 85/155 (54%), Positives = 103/155 (66%), Gaps = 2/155 (1%) Query: 4 KTAILTASDKGARGEREDTSAQVXXXXXXXXXXXXXXXXXIVPDEQDEIIAALIELTDYF 63 + AILTASDKG+RGERED SA + +VPDE+ + A L E D Sbjct: 3 RVAILTASDKGSRGEREDKSATIIREMVADLGEVVAYA--VVPDERQLLAAKLREFCDEV 60 Query: 64 QADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRSTVMQKNRAVMLFRGICGIRG 123 ADLVLTTGGT + RDVTPEATR VI+REVPGL EAMR+ ++ ML R I GIRG Sbjct: 61 GADLVLTTGGTGFSPRDVTPEATRDVIDREVPGLPEAMRAAGLKVTPQAMLSRAIAGIRG 120 Query: 124 RTLIVNLPGTPKGVHENLAAIMDQLPEALLMVTGQ 158 ++LIVNLPG+PKGV ENLAAI+ LP L ++ G+ Sbjct: 121 KSLIVNLPGSPKGVRENLAAILPALPHGLAILKGE 155 >C0GH94.1 C0GH94_9FIRM Molybdenum cofactor synthesis domain protein Length = 170 Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust. Identities = 74/156 (47%), Positives = 103/156 (66%), Gaps = 1/156 (0%) Query: 3 WKTAILTASDKGARGEREDTSAQVXXXXXXXXXXXXXXXXXIVPDEQDEIIAALIELTDY 62 + A+LTASDKG+RGERED S +V +VPD+ + + L+E TD Sbjct: 4 FSVAVLTASDKGSRGEREDESGRVIHEMIAEAGGEVVAYD-VVPDDYNTLKDKLVEYTDE 62 Query: 63 FQADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRSTVMQKNRAVMLFRGICGIR 122 + +LVLTTGGT L+ RD TPEAT VIE++VPG++EAMR+ +QK ML R +CG+R Sbjct: 63 HKVNLVLTTGGTGLSPRDNTPEATLSVIEKQVPGIAEAMRAFGLQKTPHAMLSRAVCGLR 122 Query: 123 GRTLIVNLPGTPKGVHENLAAIMDQLPEALLMVTGQ 158 RTLIVNLPG+P+ V ENL ++ +P A+ ++ G+ Sbjct: 123 RRTLIVNLPGSPRAVRENLGVVLPAIPHAVHVLCGE 158 >B1I5T6.1 B1I5T6_DESAP Molybdenum cofactor synthesis domain Length = 162 Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust. Identities = 82/158 (51%), Positives = 105/158 (66%), Gaps = 2/158 (1%) Query: 3 WKTAILTASDKGARGEREDTSAQVXXXXXXXXXXXXXXXXXIVPDEQDEIIAALIELTDY 62 ++ A++TASDKG+RGERED S +V IVPD+ + II L+EL D Sbjct: 2 FRVAVVTASDKGSRGEREDESGRVIEDMIVTLGWELVDTR-IVPDDIEVIIETLVELCDD 60 Query: 63 FQADLVLTTGGTDLAIRDVTPEATRRVIEREVPGLSEAMRSTVMQKNRAVMLFRGICGIR 122 +ADLVLTTGGT A+RD TPEAT V+ER+VPGL+EAMR+ +K +L RG+ GIR Sbjct: 61 -RADLVLTTGGTGFALRDNTPEATLAVVERQVPGLAEAMRAETSKKTPRAILSRGVAGIR 119 Query: 123 GRTLIVNLPGTPKGVHENLAAIMDQLPEALLMVTGQYR 160 RTLIVNLPG+PK V E L I+ LP L ++TG+ R Sbjct: 120 KRTLIVNLPGSPKAVRECLEVILPALPHGLEILTGRAR 157 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.134 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 796,332,867 Number of extensions: 25267480 Number of successful extensions: 68696 Number of sequences better than 1.0e-05: 1031 Number of HSP's gapped: 68498 Number of HSP's successfully gapped: 1031 Length of query: 161 Length of database: 3,060,696,203 Length adjustment: 121 Effective length of query: 40 Effective length of database: 1,920,753,388 Effective search space: 76830135520 Effective search space used: 76830135520 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 126 (53.1 bits)