BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0370.0018.p (542 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KE42.1 B3KE42_9BACI 60 kDa chaperonin 880 0.0 B1DH66.1 B1DH66_9BACL 60 kDa chaperonin 835 0.0 Q2B307.1 Q2B307_9BACI 60 kDa chaperonin 797 0.0 C3GVK9.1 C3GVK9_BACTU 60 kDa chaperonin 2 795 0.0 C3EF72.1 C3EF72_BACTK 60 kDa chaperonin 2 795 0.0 >B3KE42.1 B3KE42_9BACI 60 kDa chaperonin Length = 542 Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/531 (83%), Positives = 472/531 (88%) Query: 1 MAKEIKFSEDARRAMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE 60 MAK+IKFSEDARR+MLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE Sbjct: 1 MAKDIKFSEDARRSMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE 60 Query: 61 LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGID 120 LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPM+IRKGID Sbjct: 61 LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMIIRKGID 120 Query: 121 KAVKAAVTELQNIAKPIEXXXXXXXXXXXXXXXDEVGKLIAEAMEKVGKDGVITVEESRG 180 KAVKAAVTEL NIAK ++ +EVG+LIAEAM+KVGKDGVITVEESRG Sbjct: 121 KAVKAAVTELANIAKEVKNHQEIAQVASVSAADEEVGQLIAEAMDKVGKDGVITVEESRG 180 Query: 181 FLTELEVVEGMQFDRGYISPYMITDTDKMEAVLENPYILITDKKISSTQETLPLLEKIVQ 240 FLTELEVVEGMQFDRGYISPYMITDTDKMEAVLENPYILITDKK+++TQE LP+LEKIVQ Sbjct: 181 FLTELEVVEGMQFDRGYISPYMITDTDKMEAVLENPYILITDKKVTNTQEILPILEKIVQ 240 Query: 241 QARPLVIIAEDIEGEAQAMLIVNKLRGTFNAVAVKAPGFGDRREAMLQDIAALTGGQVIT 300 Q +PLV+IAEDIEGEAQAMLIVNKLRGTFNAVAVKAPGFGDRR+AMLQDIAALTGGQVIT Sbjct: 241 QGKPLVLIAEDIEGEAQAMLIVNKLRGTFNAVAVKAPGFGDRRKAMLQDIAALTGGQVIT 300 Query: 301 EKLGLDLKSTSVEQLGNARQVRVTKENTTIVDGSGDKADINARVSQIRAQLEETTSEFDK 360 E+LGLDLK+ S++QLG ARQVRVTKENT IVDG+G+K DI+ARV QIR QLEETTS+FDK Sbjct: 301 EELGLDLKTASIDQLGTARQVRVTKENTIIVDGAGNKEDIDARVKQIRNQLEETTSDFDK 360 Query: 361 EKLQERXXXXXXXXXXXXXXXXTETELKERKLRIEDALNATRAAVEEGIVSGGGTXXXXX 420 EKLQER TETELKERKLRIEDALNATRAAVEEG+VSGGGT Sbjct: 361 EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNATRAAVEEGMVSGGGTALVNV 420 Query: 421 XXXXXXXXXTGDEKTGVNIVLRALEEPIRTIAANAGQEGSVIVDRLKKESIGIGYNAATG 480 GDEKTGVNIVLRALEEPIRTIAANAGQEGSVIV+RLKKE IGIGYNAAT Sbjct: 421 YNAVAAVQVEGDEKTGVNIVLRALEEPIRTIAANAGQEGSVIVERLKKEEIGIGYNAATD 480 Query: 481 EWVNMFEAGIVDPAKVTRSALQNAASVAAMFLTTEAVIADKPEPEKPSMPD 531 WVNMFEAGIVDPAKVTRSALQNAASVAAMFLTTEAVIADKPEPEKP+MPD Sbjct: 481 TWVNMFEAGIVDPAKVTRSALQNAASVAAMFLTTEAVIADKPEPEKPAMPD 531 >B1DH66.1 B1DH66_9BACL 60 kDa chaperonin Length = 544 Score = 835 bits (2158), Expect = 0.0, Method: Compositional matrix adjust. Identities = 420/525 (80%), Positives = 457/525 (87%) Query: 1 MAKEIKFSEDARRAMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE 60 MAKEIKFSEDARRAMLRGVD LANAVKVTLGPKGRNVVLEKKFGSPLITNDGV+IAKEIE Sbjct: 1 MAKEIKFSEDARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVSIAKEIE 60 Query: 61 LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGID 120 LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGI+ Sbjct: 61 LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGIE 120 Query: 121 KAVKAAVTELQNIAKPIEXXXXXXXXXXXXXXXDEVGKLIAEAMEKVGKDGVITVEESRG 180 KAVKAA+ EL+ IAKPIE +EVG+LIAEAMEKVG DGVITVEES+G Sbjct: 121 KAVKAAIEELKVIAKPIEGKQSIAQVASISSADEEVGQLIAEAMEKVGNDGVITVEESKG 180 Query: 181 FLTELEVVEGMQFDRGYISPYMITDTDKMEAVLENPYILITDKKISSTQETLPLLEKIVQ 240 F+TELEVVEGMQFDRGY+SPYMITDTDKMEAVL+NPYILITDKKIS+ QE LP+LEK+VQ Sbjct: 181 FVTELEVVEGMQFDRGYVSPYMITDTDKMEAVLDNPYILITDKKISNIQEILPVLEKVVQ 240 Query: 241 QARPLVIIAEDIEGEAQAMLIVNKLRGTFNAVAVKAPGFGDRREAMLQDIAALTGGQVIT 300 + L+IIAEDIEGEAQA L++NKLRGTF V VKAPGFGDRR+AML DIAALTG QV+T Sbjct: 241 SGKQLLIIAEDIEGEAQATLVLNKLRGTFTCVGVKAPGFGDRRKAMLADIAALTGAQVVT 300 Query: 301 EKLGLDLKSTSVEQLGNARQVRVTKENTTIVDGSGDKADINARVSQIRAQLEETTSEFDK 360 E+LGL+LKS SV+QLG+ARQ+R+TKENT IVDGSG+ DI ARV+QIR QLEETTSEFD+ Sbjct: 301 EELGLELKSASVDQLGSARQIRITKENTIIVDGSGNPDDIQARVNQIRVQLEETTSEFDR 360 Query: 361 EKLQERXXXXXXXXXXXXXXXXTETELKERKLRIEDALNATRAAVEEGIVSGGGTXXXXX 420 EKLQER TETELKERKLRIEDALN+TRAAVEEGIVSGGGT Sbjct: 361 EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALINV 420 Query: 421 XXXXXXXXXTGDEKTGVNIVLRALEEPIRTIAANAGQEGSVIVDRLKKESIGIGYNAATG 480 TGDE+TGVNIVLR+LEEP+RTIAANAGQEGSVIV+RLK E +G+GYNAATG Sbjct: 421 YKAVAAVQTTGDEQTGVNIVLRSLEEPLRTIAANAGQEGSVIVERLKNEKVGVGYNAATG 480 Query: 481 EWVNMFEAGIVDPAKVTRSALQNAASVAAMFLTTEAVIADKPEPE 525 EWVNMFEAGIVDPAKVTRSALQNAASVAAMFLTTEAV+ADKPEP+ Sbjct: 481 EWVNMFEAGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPK 525 >Q2B307.1 Q2B307_9BACI 60 kDa chaperonin Length = 543 Score = 797 bits (2059), Expect = 0.0, Method: Compositional matrix adjust. Identities = 402/532 (75%), Positives = 449/532 (84%), Gaps = 1/532 (0%) Query: 1 MAKEIKFSEDARRAMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE 60 MAKEIKFSE+ARRAMLRGVD+LANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE Sbjct: 1 MAKEIKFSEEARRAMLRGVDSLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE 60 Query: 61 LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGID 120 LEDAFENMGA+LV EVA+KTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPM IRKGI+ Sbjct: 61 LEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGIRKGIE 120 Query: 121 KAVKAAVTELQNIAKPIEXXXXXXXXXXXXXXXDEVGKLIAEAMEKVGKDGVITVEESRG 180 KAV AAV EL++I+KPIE +EVG+LIAEAME+VG DGVIT+EES+G Sbjct: 121 KAVTAAVEELKSISKPIEGKESIAQVAAISAADNEVGQLIAEAMERVGNDGVITIEESKG 180 Query: 181 FLTELEVVEGMQFDRGYISPYMITDTDKMEAVLENPYILITDKKISSTQETLPLLEKIVQ 240 F TEL+VVEGMQFDRGY SPYM+TD+DKMEAVLENPYILITDKKI+S QE LP+LE++VQ Sbjct: 181 FTTELDVVEGMQFDRGYASPYMVTDSDKMEAVLENPYILITDKKITSIQEILPVLEQVVQ 240 Query: 241 QARPLVIIAEDIEGEAQAMLIVNKLRGTFNAVAVKAPGFGDRREAMLQDIAALTGGQVIT 300 Q +PL+++AED+EGEA A L+VNKLRGTFNAVAVKAPGFGDRR+AML+DIA LTGG+VIT Sbjct: 241 QGKPLLLVAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAVLTGGEVIT 300 Query: 301 EKLGLDLKSTSVEQLGNARQVRVTKENTTIVDGSGDKADINARVSQIRAQLEETTSEFDK 360 E+LG DLKS +++ LG A +V V+KENTTIV+GSGD A I RV+QIR QLEETTSEFD+ Sbjct: 301 EELGRDLKSATIDSLGRASKVVVSKENTTIVEGSGDSAQIAGRVNQIRVQLEETTSEFDR 360 Query: 361 EKLQERXXXXXXXXXXXXXXXXTETELKERKLRIEDALNATRAAVEEGIVSGGGTXXXXX 420 EKLQER TETELKERKLRIEDALN+TRAAVEEGIVSGGG Sbjct: 361 EKLQERLAKLAGGVAVVKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGVALLNV 420 Query: 421 XXXXXXXXXTGDEKTGVNIVLRALEEPIRTIAANAGQEGSVIVDRLKKESIGIGYNAATG 480 GDE TG+NIVLRA+EEP+RTIA NAG EGSVIVDRLK+E +G G+NAATG Sbjct: 421 YNKVASLEAEGDEATGINIVLRAMEEPVRTIAHNAGLEGSVIVDRLKREDVGTGFNAATG 480 Query: 481 EWVNMFEAGIVDPAKVTRSALQNAASVAAMFLTTEAVIADKPEPEK-PSMPD 531 EWVNM EAGIVDP KVTRSALQNA SVAAMFLTTEAV+ADKPE P+MPD Sbjct: 481 EWVNMIEAGIVDPTKVTRSALQNAGSVAAMFLTTEAVVADKPEENAGPAMPD 532 >C3GVK9.1 C3GVK9_BACTU 60 kDa chaperonin 2 Length = 544 Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/531 (75%), Positives = 447/531 (84%) Query: 1 MAKEIKFSEDARRAMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE 60 MAK+IKFSE+ARR+MLRGVD LANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE Sbjct: 1 MAKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE 60 Query: 61 LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGID 120 LEDAFENMGA+LV EVA+KTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPM +RKGI+ Sbjct: 61 LEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIE 120 Query: 121 KAVKAAVTELQNIAKPIEXXXXXXXXXXXXXXXDEVGKLIAEAMEKVGKDGVITVEESRG 180 KAV AA+ EL+ I+KPIE +EVG+LIAEAME+VG DGVIT+EES+G Sbjct: 121 KAVTAAIEELKTISKPIEGKSSIAQVAAISAADEEVGQLIAEAMERVGNDGVITLEESKG 180 Query: 181 FLTELEVVEGMQFDRGYISPYMITDTDKMEAVLENPYILITDKKISSTQETLPLLEKIVQ 240 F TEL+VVEGMQFDRGY SPYMITD+DKMEAVL+NPYILITDKKIS+ QE LP+LE++VQ Sbjct: 181 FTTELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQ 240 Query: 241 QARPLVIIAEDIEGEAQAMLIVNKLRGTFNAVAVKAPGFGDRREAMLQDIAALTGGQVIT 300 Q +PL+IIAED+EGEA A L+VNKLRGTFN VAVKAPGFGDRR+AML+DIA LTGG+VIT Sbjct: 241 QGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVIT 300 Query: 301 EKLGLDLKSTSVEQLGNARQVRVTKENTTIVDGSGDKADINARVSQIRAQLEETTSEFDK 360 E+LG DLKS +VE LG A +V VTKENTT+V+G G I AR+ QIRAQLEETTSEFD+ Sbjct: 301 EELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDR 360 Query: 361 EKLQERXXXXXXXXXXXXXXXXTETELKERKLRIEDALNATRAAVEEGIVSGGGTXXXXX 420 EKLQER TETELKERKLRIEDALN+TRAAVEEGIV+GGGT Sbjct: 361 EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNV 420 Query: 421 XXXXXXXXXTGDEKTGVNIVLRALEEPIRTIAANAGQEGSVIVDRLKKESIGIGYNAATG 480 GDE TG+NIVLRALEEP+R IA NAG EGSV+V+RLK E +G+G+NAATG Sbjct: 421 YTKVASIVAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATG 480 Query: 481 EWVNMFEAGIVDPAKVTRSALQNAASVAAMFLTTEAVIADKPEPEKPSMPD 531 EWVNM E+GIVDPAKVTRSALQNAASVAAMFLTTEAV+ADKPEP P+MPD Sbjct: 481 EWVNMLESGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPD 531 >C3EF72.1 C3EF72_BACTK 60 kDa chaperonin 2 Length = 544 Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust. Identities = 399/531 (75%), Positives = 447/531 (84%) Query: 1 MAKEIKFSEDARRAMLRGVDALANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE 60 MAK+IKFSE+ARR+MLRGVD LANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE Sbjct: 1 MAKDIKFSEEARRSMLRGVDTLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIE 60 Query: 61 LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGID 120 LEDAFENMGA+LV EVA+KTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPM +RKGI+ Sbjct: 61 LEDAFENMGAKLVAEVASKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMGLRKGIE 120 Query: 121 KAVKAAVTELQNIAKPIEXXXXXXXXXXXXXXXDEVGKLIAEAMEKVGKDGVITVEESRG 180 KAV AA+ EL+ I+KPIE +EVG+LIAEAME+VG DGVIT+EES+G Sbjct: 121 KAVTAAIEELKTISKPIEGKSSIAQVAAISAADEEVGQLIAEAMERVGNDGVITLEESKG 180 Query: 181 FLTELEVVEGMQFDRGYISPYMITDTDKMEAVLENPYILITDKKISSTQETLPLLEKIVQ 240 F TEL+VVEGMQFDRGY SPYMITD+DKMEAVL+NPYILITDKKIS+ QE LP+LE++VQ Sbjct: 181 FTTELDVVEGMQFDRGYASPYMITDSDKMEAVLDNPYILITDKKISNIQEILPVLEQVVQ 240 Query: 241 QARPLVIIAEDIEGEAQAMLIVNKLRGTFNAVAVKAPGFGDRREAMLQDIAALTGGQVIT 300 Q +PL+IIAED+EGEA A L+VNKLRGTFN VAVKAPGFGDRR+AML+DIA LTGG+VIT Sbjct: 241 QGKPLLIIAEDVEGEALATLVVNKLRGTFNVVAVKAPGFGDRRKAMLEDIAILTGGEVIT 300 Query: 301 EKLGLDLKSTSVEQLGNARQVRVTKENTTIVDGSGDKADINARVSQIRAQLEETTSEFDK 360 E+LG DLKS +VE LG A +V VTKENTT+V+G G I AR+ QIRAQLEETTSEFD+ Sbjct: 301 EELGRDLKSATVESLGRAGKVVVTKENTTVVEGVGSTEQIEARIGQIRAQLEETTSEFDR 360 Query: 361 EKLQERXXXXXXXXXXXXXXXXTETELKERKLRIEDALNATRAAVEEGIVSGGGTXXXXX 420 EKLQER TETELKERKLRIEDALN+TRAAVEEGIV+GGGT Sbjct: 361 EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVAGGGTSLMNV 420 Query: 421 XXXXXXXXXTGDEKTGVNIVLRALEEPIRTIAANAGQEGSVIVDRLKKESIGIGYNAATG 480 GDE TG+NIVLRALEEP+R IA NAG EGSV+V+RLK E +G+G+NAATG Sbjct: 421 YTKVASIVAEGDEATGINIVLRALEEPVRQIAINAGLEGSVVVERLKGEKVGVGFNAATG 480 Query: 481 EWVNMFEAGIVDPAKVTRSALQNAASVAAMFLTTEAVIADKPEPEKPSMPD 531 EWVNM E+GIVDPAKVTRSALQNAASVAAMFLTTEAV+ADKPEP P+MPD Sbjct: 481 EWVNMLESGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPNAPAMPD 531 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.312 0.130 0.342 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,540,896,882 Number of extensions: 94548046 Number of successful extensions: 255086 Number of sequences better than 1.0e-05: 11544 Number of HSP's gapped: 238844 Number of HSP's successfully gapped: 11622 Length of query: 542 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 401 Effective length of database: 1,732,333,088 Effective search space: 694665568288 Effective search space used: 694665568288 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits) S2: 134 (56.2 bits)