BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0369.0031.p (669 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KAE1.1 B3KAE1_9BACI Pyruvate flavodoxin/ferredoxin oxidoreduct... 907 0.0 A8VVW1.1 A8VVW1_9BACI Pyruvate:ferredoxin oxidoreductase and rel... 894 0.0 A4IP27.1 A4IP27_GEOTN Pyruvate synthase subunit PorA 880 0.0 B4BMJ6.1 B4BMJ6_9BACI Pyruvate flavodoxin/ferredoxin oxidoreduct... 880 0.0 Q67JA6.1 Q67JA6_SYMTH Pyruvate ferredoxin oxidoreductase alpha-b... 800 0.0 >B3KAE1.1 B3KAE1_9BACI Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein Length = 765 Score = 907 bits (2343), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/669 (65%), Positives = 530/669 (79%), Gaps = 4/669 (0%) Query: 1 MFMLEQMPVQAGTRMPMVMNLICRSISGPLNIHGDHSDLYFALNTGWPILMCRDPQSVYD 60 ++M+EQ+PVQAGTR PMVMNL+ R++SGPL+I GDHSDLY+ LNTGW IL R PQ+VYD Sbjct: 101 LYMIEQLPVQAGTRFPMVMNLVTRAVSGPLDIRGDHSDLYYGLNTGWVILTARSPQAVYD 160 Query: 61 MNLMALKLAEHAKVRLPVMVASDGYFTSHQKRRVQAFAHREDVHKFVGEQPPVGFTDTLD 120 MN+MAL++AEH VRLPV+VA DG+FTSHQKRRV F +RE V FVGEQ P + LD Sbjct: 161 MNIMALRIAEHEDVRLPVIVAYDGFFTSHQKRRVHIFTNRETVQGFVGEQAP-EYPHVLD 219 Query: 121 RNNPVTVGPYMNEPDYINNRYQQSVAMYNAGEVFEEIAQEFAELTGRYYPMIEQYRMEDA 180 NNP+ VG YMN D +NN YQQS A+Y AGEVF+E+A+E+A L+GR Y ++ YRMEDA Sbjct: 220 ENNPIVVGAYMNGDDLMNNHYQQSNAIYRAGEVFKEVAEEYAALSGRSYSPLDLYRMEDA 279 Query: 181 DVAVFLMNSASEIIKDVVDQLRLQGIKAGAISPNMIRPFPQKQIAEALKNVKAITVGDRA 240 +VA+FL+NSA+E KDVVD+LR +GIKAG ISPN++RPFP ++I EAL VKA+ VG+RA Sbjct: 280 EVALFLLNSAAESSKDVVDRLRAKGIKAGIISPNILRPFPAREIREALTGVKALLVGERA 339 Query: 241 DSVGGHGGNMVNEIKAALFTYGNTTTKVISRIYGLGGKDFYAEDGHHFFQLAMDAVAADR 300 DS G HG N+ +E+KAAL V+SRI+GLGGKD+YA+D FF L ++A+ Sbjct: 340 DSYGAHGANLTHEVKAALQEIRGPQPIVLSRIFGLGGKDYYADDAEAFFALTIEAMELGY 399 Query: 301 VDIPFDYYGHNPGTPDKAPKRLLKPMSFESLKTGLITVKQNEETGKLSVRVPPVRSLMKK 360 +PFDYYG PG ++ + ++ PM+ +S K+GLITVK +E T KLSV+VPP+R+L K Sbjct: 400 AKVPFDYYGQTPGAEEQRLQPVIAPMNGDSFKSGLITVKVDEGTSKLSVKVPPMRALAAK 459 Query: 361 PRRLSPGHGACPGCGIFSGLELFFKGIEGDIVALYHTGCAMVTTTGYPYSAHKSTFIHNL 420 P+R + GHGACPGCGIF LELFFKGIEG +V L+HTGCA +TTTGYPY++HK +FIHNL Sbjct: 460 PKRFASGHGACPGCGIFPALELFFKGIEGHVVTLFHTGCAYITTTGYPYNSHKQSFIHNL 519 Query: 421 FQNGAATLSGVVEMFWERKRRGELDGLGLKEDFTFVMVTGDGGMDIGMGPAIGAALRGHK 480 FQNG ATLSG VE F E+KRRGE++ + EDFTFVMVTGDGGMDIGMG AIG ALRGH Sbjct: 520 FQNGPATLSGTVEAFLEKKRRGEIE---VPEDFTFVMVTGDGGMDIGMGSAIGTALRGHN 576 Query: 481 MIIVEYDNEGYMNTGAQQSYSTPLGHRTSTSSIGKTQQGKVTQHKDTAQIMAATNIPYVF 540 +II+EYDNEGYMNTGAQ SYSTPLGH TSTS +GK QQGK HKDT Q+MAA +IPYVF Sbjct: 577 LIILEYDNEGYMNTGAQLSYSTPLGHMTSTSGVGKQQQGKAFHHKDTVQMMAAAHIPYVF 636 Query: 541 TGCEAYPQDLLKKAAKAQWYAQNEGLVYGKILIACPLNWMSEDKDGTDIVSLAVESCFFP 600 TG EA+PQDL+KKAAKAQWYAQN G VYGK+LI CPLNW S DKDG +IV AV S FFP Sbjct: 637 TGTEAFPQDLVKKAAKAQWYAQNVGTVYGKLLITCPLNWKSSDKDGENIVRAAVNSNFFP 696 Query: 601 LYEVEQGTTTITYNPEDKDKRVEVSAWLKTMGKTRHLLKPENEPALRAFESEVQRRWTRL 660 LYEVEQG T ITY+PE K K+V +S WLK MGK+RHLLK EN+ L FE EV+RRW+ L Sbjct: 697 LYEVEQGETNITYDPEAKKKQVPLSDWLKYMGKSRHLLKEENKEMLGEFEKEVERRWSIL 756 Query: 661 KAKHEHPDL 669 KAKHE+P L Sbjct: 757 KAKHENPLL 765 >A8VVW1.1 A8VVW1_9BACI Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit-like protein Length = 763 Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust. Identities = 422/667 (63%), Positives = 526/667 (78%), Gaps = 4/667 (0%) Query: 1 MFMLEQMPVQAGTRMPMVMNLICRSISGPLNIHGDHSDLYFALNTGWPILMCRDPQSVYD 60 ++M+EQ+PVQ+G R PMV+NL+ R++SGPL+I GDHSDLY+ LNTGW IL R PQ+VYD Sbjct: 99 LYMIEQLPVQSGLRFPMVLNLVTRAVSGPLDIRGDHSDLYYGLNTGWVILTARTPQAVYD 158 Query: 61 MNLMALKLAEHAKVRLPVMVASDGYFTSHQKRRVQAFAHREDVHKFVGEQPPVGFTDTLD 120 MN+MALK+AE+++VRLPV+VA DG+FTSHQKRRV F RE V FVGE P G+ ++D Sbjct: 159 MNIMALKIAENSEVRLPVIVAYDGFFTSHQKRRVNMFKERETVQSFVGEAPK-GYPVSID 217 Query: 121 RNNPVTVGPYMNEPDYINNRYQQSVAMYNAGEVFEEIAQEFAELTGRYYPMIEQYRMEDA 180 ++NPVT+G +M+ D NN +QQS A+Y A +V++E+A E+ +++GR Y +++ Y MEDA Sbjct: 218 KDNPVTIGAHMDGNDLTNNHFQQSEALYKAYDVYKEVAAEYEQISGRSYDILDTYGMEDA 277 Query: 181 DVAVFLMNSASEIIKDVVDQLRLQGIKAGAISPNMIRPFPQKQIAEALKNVKAITVGDRA 240 +VA+FL+NSA+E KDVVD+LR +G+KAG +SPN+IRPFP I E KNVK + +G+RA Sbjct: 278 EVALFLLNSAAETAKDVVDKLRAKGVKAGVVSPNIIRPFPADDIREVFKNVKTVLIGERA 337 Query: 241 DSVGGHGGNMVNEIKAALFTYGNTTTKVISRIYGLGGKDFYAEDGHHFFQLAMDAVAADR 300 DS GG+G N+ +E+K+AL + TKVISR++G+GGKDFY++D FFQ+A+DA Sbjct: 338 DSYGGNGANLSHELKSALQEDLDNQTKVISRVFGMGGKDFYSDDAEAFFQMAIDATEDPS 397 Query: 301 VDIPFDYYGHNPGTPDKAPKRLLKPMSFESLKTGLITVKQNEETGKLSVRVPPVRSLMKK 360 FDYYGH PG + + +++PM+ ES +GLI VKQ+EET KL VR+PP+R L K Sbjct: 398 TVKNFDYYGHTPGNKELELQPVIEPMTVESYNSGLINVKQDEETNKLKVRIPPLRQLTSK 457 Query: 361 PRRLSPGHGACPGCGIFSGLELFFKGIEGDIVALYHTGCAMVTTTGYPYSAHKSTFIHNL 420 P+R + GHGACPGCGIF GLELFFKGIEGD V L+HTGC V T+ YP+S+HK T IHNL Sbjct: 458 PKRFASGHGACPGCGIFPGLELFFKGIEGDAVILFHTGCGYVVTSAYPHSSHKQTMIHNL 517 Query: 421 FQNGAATLSGVVEMFWERKRRGELDGLGLKEDFTFVMVTGDGGMDIGMGPAIGAALRGHK 480 FQ+G ATLSG VE F+E K RGE+D + +DFTFVM+TGDGGMDIGMG AIG ALR HK Sbjct: 518 FQSGPATLSGTVEAFFEMKERGEVD---IDDDFTFVMITGDGGMDIGMGSAIGTALRNHK 574 Query: 481 MIIVEYDNEGYMNTGAQQSYSTPLGHRTSTSSIGKTQQGKVTQHKDTAQIMAATNIPYVF 540 MII+EYDNEGYMNTG+Q SYSTP+GH TST+ +GK QQGK HKDTAQIMA+TNIPYVF Sbjct: 575 MIILEYDNEGYMNTGSQMSYSTPIGHMTSTTGVGKKQQGKAFHHKDTAQIMASTNIPYVF 634 Query: 541 TGCEAYPQDLLKKAAKAQWYAQNEGLVYGKILIACPLNWMSEDKDGTDIVSLAVESCFFP 600 TG EAYPQDL+KKAAKAQWYAQNEGLVYGKILI CPLNW S D+DG I+ AVESCFFP Sbjct: 635 TGTEAYPQDLIKKAAKAQWYAQNEGLVYGKILITCPLNWKSNDRDGEKIMKAAVESCFFP 694 Query: 601 LYEVEQGTTTITYNPEDKDKRVEVSAWLKTMGKTRHLLKPENEPALRAFESEVQRRWTRL 660 LYE+EQG T ITY+PE K+KRVE+S WL MGKT+HLLK EN+ F +EV RRW +L Sbjct: 695 LYEIEQGETNITYDPEAKNKRVELSEWLGYMGKTKHLLKEENKAIYDDFVNEVDRRWNKL 754 Query: 661 KAKHEHP 667 K KHE P Sbjct: 755 KVKHETP 761 >A4IP27.1 A4IP27_GEOTN Pyruvate synthase subunit PorA Length = 755 Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/669 (63%), Positives = 534/669 (79%), Gaps = 4/669 (0%) Query: 1 MFMLEQMPVQAGTRMPMVMNLICRSISGPLNIHGDHSDLYFALNTGWPILMCRDPQSVYD 60 M+MLEQ+PVQ+GTR PMV+NL+ RS+SGPL+IHGDHSDLYF LNTGW +L+ R PQ+VYD Sbjct: 91 MYMLEQLPVQSGTRFPMVLNLVTRSVSGPLDIHGDHSDLYFTLNTGWVVLLARTPQAVYD 150 Query: 61 MNLMALKLAEHAKVRLPVMVASDGYFTSHQKRRVQAFAHREDVHKFVGEQPPVGFTDTLD 120 MN+MAL++AEH VRLPV++A DG+FTSHQKR+V F RE V F+G + GF D Sbjct: 151 MNVMALRIAEHEDVRLPVIIAYDGFFTSHQKRKVHYFRDRETVQAFIGPRKE-GFPTAAD 209 Query: 121 RNNPVTVGPYMNEPDYINNRYQQSVAMYNAGEVFEEIAQEFAELTGRYYPMIEQYRMEDA 180 PVT+G +M D INN YQQSVA+Y AG+VF ++A E+ + +GR Y ++ YRMEDA Sbjct: 210 PKRPVTIGAHMGGDDLINNHYQQSVALYRAGDVFRQVAAEYEKWSGRRYEPLDLYRMEDA 269 Query: 181 DVAVFLMNSASEIIKDVVDQLRLQGIKAGAISPNMIRPFPQKQIAEALKNVKAITVGDRA 240 +VA+FL+NSA+E KDV D+LR QGIKAG ISPN+IRPFP ++I +ALK+VKA+ +G+RA Sbjct: 270 EVALFLLNSAAETAKDVADRLRKQGIKAGVISPNIIRPFPAEEIRQALKHVKALLIGERA 329 Query: 241 DSVGGHGGNMVNEIKAALFTYGNTTTKVISRIYGLGGKDFYAEDGHHFFQLAMDAVAADR 300 DS G HG NM +E+KAAL + T V+SR+YGLGGKDFYAED F++A+DA+ + Sbjct: 330 DSYGAHGANMTHEVKAALQEDRDNQTIVLSRVYGLGGKDFYAEDAEALFRMAIDAMEKGK 389 Query: 301 VDIPFDYYGHNPGTPDKAPKRLLKPMSFESLKTGLITVKQNEETGKLSVRVPPVRSLMKK 360 + FDY+GH PG ++ PKRLL+P+ ++ ++GLI V +++T +L+V++PP+R+L K Sbjct: 390 AEKTFDYFGHVPGRLEQQPKRLLEPIHGDAFRSGLIHVTVDDKTKRLNVKIPPLRALTAK 449 Query: 361 PRRLSPGHGACPGCGIFSGLELFFKGIEGDIVALYHTGCAMVTTTGYPYSAHKSTFIHNL 420 P+RL+PGHGACPGCGIF GLELFFKGIEGDIV L+ TGCA V + YPYS+HK T +HNL Sbjct: 450 PKRLAPGHGACPGCGIFPGLELFFKGIEGDIVVLFQTGCAYVVSAAYPYSSHKQTMVHNL 509 Query: 421 FQNGAATLSGVVEMFWERKRRGELDGLGLKEDFTFVMVTGDGGMDIGMGPAIGAALRGHK 480 FQNGAATLSG+VE F+E KRRGEL+ + +D TFVMVTGDGGMDIGMG AIG ALR HK Sbjct: 510 FQNGAATLSGMVEAFFELKRRGELN---VSDDVTFVMVTGDGGMDIGMGSAIGTALRNHK 566 Query: 481 MIIVEYDNEGYMNTGAQQSYSTPLGHRTSTSSIGKTQQGKVTQHKDTAQIMAATNIPYVF 540 +II+EYDNEGYMNTGAQ SYSTP+GH T+T+ +GK Q+GK HKDT QIMAATNIPYVF Sbjct: 567 LIIIEYDNEGYMNTGAQMSYSTPMGHMTTTTGVGKGQRGKSFHHKDTPQIMAATNIPYVF 626 Query: 541 TGCEAYPQDLLKKAAKAQWYAQNEGLVYGKILIACPLNWMSEDKDGTDIVSLAVESCFFP 600 TG EA+PQDL+KKAAKAQWYAQ+EG VYGK+LI CPLNW SE++ G I+ AV SCFFP Sbjct: 627 TGTEAFPQDLVKKAAKAQWYAQHEGTVYGKLLITCPLNWKSEERYGETILQAAVNSCFFP 686 Query: 601 LYEVEQGTTTITYNPEDKDKRVEVSAWLKTMGKTRHLLKPENEPALRAFESEVQRRWTRL 660 LYEVE+G TTITY+PE K +R+ +S WLK MGKT+HLL+ EN+ LR E EV+RRWT L Sbjct: 687 LYEVERGKTTITYDPEAKGRRIPLSEWLKYMGKTKHLLREENKDLLRELEEEVERRWTIL 746 Query: 661 KAKHEHPDL 669 KAKHEHP L Sbjct: 747 KAKHEHPYL 755 >B4BMJ6.1 B4BMJ6_9BACI Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein Length = 764 Score = 880 bits (2274), Expect = 0.0, Method: Compositional matrix adjust. Identities = 428/669 (63%), Positives = 534/669 (79%), Gaps = 4/669 (0%) Query: 1 MFMLEQMPVQAGTRMPMVMNLICRSISGPLNIHGDHSDLYFALNTGWPILMCRDPQSVYD 60 M+MLEQ+PVQ+GTR PMV+NL+ RS+SGPL+IHGDHSDLYF LNTGW +L+ R PQ+VYD Sbjct: 100 MYMLEQLPVQSGTRFPMVLNLVTRSVSGPLDIHGDHSDLYFTLNTGWVVLLARTPQAVYD 159 Query: 61 MNLMALKLAEHAKVRLPVMVASDGYFTSHQKRRVQAFAHREDVHKFVGEQPPVGFTDTLD 120 MN+MAL++AEH VRLPV++A DG+FTSHQKR+V F RE V F+G + GF D Sbjct: 160 MNVMALRIAEHEDVRLPVIIAYDGFFTSHQKRKVHYFRDRETVQAFIGPRKE-GFPTAAD 218 Query: 121 RNNPVTVGPYMNEPDYINNRYQQSVAMYNAGEVFEEIAQEFAELTGRYYPMIEQYRMEDA 180 PVT+G +M D INN YQQSVA+Y AG+VF ++A E+ + +GR Y ++ YRMEDA Sbjct: 219 PKRPVTIGAHMGGDDLINNHYQQSVALYRAGDVFRQVAAEYEKWSGRRYEPLDLYRMEDA 278 Query: 181 DVAVFLMNSASEIIKDVVDQLRLQGIKAGAISPNMIRPFPQKQIAEALKNVKAITVGDRA 240 +VA+FL+NSA+E KDV D+LR QGIKAG ISPN+IRPFP ++I +ALK+VKA+ +G+RA Sbjct: 279 EVALFLLNSAAETAKDVADRLRKQGIKAGVISPNIIRPFPAEEIRQALKHVKALLIGERA 338 Query: 241 DSVGGHGGNMVNEIKAALFTYGNTTTKVISRIYGLGGKDFYAEDGHHFFQLAMDAVAADR 300 DS G HG NM +E+KAAL + T V+SR+YGLGGKDFYAED F++A+DA+ + Sbjct: 339 DSYGAHGANMTHEVKAALQEDRDNQTIVLSRVYGLGGKDFYAEDAEALFRMAIDAMEKGK 398 Query: 301 VDIPFDYYGHNPGTPDKAPKRLLKPMSFESLKTGLITVKQNEETGKLSVRVPPVRSLMKK 360 + FDY+GH PG ++ PKRLL+P+ ++ ++GLI V +++T +L+V++PP+R+L K Sbjct: 399 AEKTFDYFGHVPGRLEQQPKRLLEPIHGDAFRSGLIHVTVDDKTKRLNVKIPPLRALTAK 458 Query: 361 PRRLSPGHGACPGCGIFSGLELFFKGIEGDIVALYHTGCAMVTTTGYPYSAHKSTFIHNL 420 P+RL+PGHGACPGCGIF GLELFFKGIEGDIV L+ TGCA V + YPYS+HK T +HNL Sbjct: 459 PKRLAPGHGACPGCGIFPGLELFFKGIEGDIVVLFQTGCAYVVSAAYPYSSHKQTMVHNL 518 Query: 421 FQNGAATLSGVVEMFWERKRRGELDGLGLKEDFTFVMVTGDGGMDIGMGPAIGAALRGHK 480 FQNGAATLSG+VE F+E KRRGEL+ + +D TFVMVTGDGGMDIGMG AIG ALR HK Sbjct: 519 FQNGAATLSGMVEAFFELKRRGELN---VSDDVTFVMVTGDGGMDIGMGSAIGTALRNHK 575 Query: 481 MIIVEYDNEGYMNTGAQQSYSTPLGHRTSTSSIGKTQQGKVTQHKDTAQIMAATNIPYVF 540 +II+EYDNEGYMNTGAQ SYSTP+GH T+T+ +GK Q+GK HKDT QIMAATNIPYVF Sbjct: 576 LIIIEYDNEGYMNTGAQMSYSTPMGHMTTTTGVGKGQRGKSFHHKDTPQIMAATNIPYVF 635 Query: 541 TGCEAYPQDLLKKAAKAQWYAQNEGLVYGKILIACPLNWMSEDKDGTDIVSLAVESCFFP 600 TG EA+PQDL+KKAAKAQWYAQ+EG VYGK+LI CPLNW SE++ G I+ AV SCFFP Sbjct: 636 TGTEAFPQDLVKKAAKAQWYAQHEGTVYGKLLITCPLNWKSEERYGETILQAAVNSCFFP 695 Query: 601 LYEVEQGTTTITYNPEDKDKRVEVSAWLKTMGKTRHLLKPENEPALRAFESEVQRRWTRL 660 LYEVE+G TTITY+PE K +R+ +S WLK MGKT+HLL+ EN+ LR E EV+RRWT L Sbjct: 696 LYEVERGKTTITYDPEAKGRRIPLSEWLKYMGKTKHLLREENKDLLRELEEEVERRWTIL 755 Query: 661 KAKHEHPDL 669 KAKHEHP L Sbjct: 756 KAKHEHPYL 764 >Q67JA6.1 Q67JA6_SYMTH Pyruvate ferredoxin oxidoreductase alpha-beta subunit Length = 755 Score = 800 bits (2067), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/669 (59%), Positives = 499/669 (74%), Gaps = 8/669 (1%) Query: 1 MFMLEQMPVQAGTRMPMVMNLICRSISGPLNIHGDHSDLYFALNTGWPILMCRDPQSVYD 60 ++ LEQMPVQ+GTRMPMVM+L+ RS+SGPL+I GDHSDLYFALNTGW IL +PQ VYD Sbjct: 95 LYALEQMPVQSGTRMPMVMDLVTRSVSGPLDIRGDHSDLYFALNTGWIILYANNPQEVYD 154 Query: 61 MNLMALKLAEHAKVRLPVMVASDGYFTSHQKRRVQAFAHREDVHKFVGEQPPVGFTDTLD 120 ++ +A+++ EH VRLPV+V DG+FTSHQKRRV F + + +FVG QP GF LD Sbjct: 155 LHPIAVRVGEHPDVRLPVIVGFDGFFTSHQKRRVSYFEDPKVLQEFVGPQPE-GFPHALD 213 Query: 121 RNNPVTVGPYMNEPDYINNRYQQSVAMYNAGEVFEEIAQEFAELTGRYYPMIEQYRMEDA 180 NP T GPYMN+PD INN+YQ +AM A V EI E+ ++GR M+E YRMEDA Sbjct: 214 PRNPQTFGPYMNDPDLINNKYQLHLAMEAARRVIPEIFAEWERISGRRLEMVEAYRMEDA 273 Query: 181 DVAVFLMNSASEIIKDVVDQLRLQGIKAGAISPNMIRPFPQKQIAEALKNVKAITVGDRA 240 DVA+ L+ SA++ K V D+LR QG++AG ++ +++RPFP +I + L+ V A+ +G+RA Sbjct: 274 DVALVLLGSAADTGKQVADKLREQGVRAGVVTLHVLRPFPAAEIRQVLRGVSAVVIGERA 333 Query: 241 DSVGGHGGNMVNEIKAALFTYGNTTTKVISRIYGLGGKDFYAEDGHHFFQLAMDAVAADR 300 DS G GGN+ +EIK+AL + T V +RIYGLGGKDFY D F++LA++ R Sbjct: 334 DSYGSGGGNLSHEIKSALKDDPDNRTLVATRIYGLGGKDFYPADAEAFYELALEMARTGR 393 Query: 301 VDIPFDYYGHNPGTPDKAPKRLLKPMSFESLKTGLITVKQNEETGKLSVRVPPVRSLMKK 360 V++PFDY+G T + P +++P++ E ++ VK +L V VPP R +M Sbjct: 394 VEVPFDYHGTTAAT-ETQPLEVVRPLTREEQQS---PVKVEVVGDELKVTVPPPRQMMGM 449 Query: 361 PRRLSPGHGACPGCGIFSGLELFFKGIEGDIVALYHTGCAMVTTTGYPYSAHKSTFIHNL 420 P+R++PGHGACPGCGIF L+ FF+ + GD+V L+ TGCAMV TTGYPYSAH+ T+IHNL Sbjct: 450 PKRITPGHGACPGCGIFPALDNFFRALSGDVVVLFQTGCAMVVTTGYPYSAHRVTYIHNL 509 Query: 421 FQNGAATLSGVVEMFWERKRRGELDGLGLKEDFTFVMVTGDGGMDIGMGPAIGAALRGHK 480 FQNGAATLSGVVEMF+E+KRRGE+D ED TFVMVTGDGGMDIGMGPAIGAALR H+ Sbjct: 510 FQNGAATLSGVVEMFYEKKRRGEIDA---GEDITFVMVTGDGGMDIGMGPAIGAALRNHR 566 Query: 481 MIIVEYDNEGYMNTGAQQSYSTPLGHRTSTSSIGKTQQGKVTQHKDTAQIMAATNIPYVF 540 MII+EYDNEGYMNTG+Q SYSTP+GH+T+TS++G+ GK HKDT QIMAA +IPYVF Sbjct: 567 MIILEYDNEGYMNTGSQLSYSTPIGHKTATSNVGRLGGGKTFHHKDTPQIMAACHIPYVF 626 Query: 541 TGCEAYPQDLLKKAAKAQWYAQNEGLVYGKILIACPLNWMSEDKDGTDIVSLAVESCFFP 600 T E+ PQDL KKAAKAQWYA+N GL YGK+LIACPLNW+SED+ G+ IV AV+ FFP Sbjct: 627 TAVESQPQDLWKKAAKAQWYAKNVGLAYGKLLIACPLNWLSEDRMGSKIVQAAVDCNFFP 686 Query: 601 LYEVEQGTTTITYNPEDKDKRVEVSAWLKTMGKTRHLLKPENEPALRAFESEVQRRWTRL 660 LYEVE+G T +TY+PE K K++ V WLK MGKTRHLLKPE L F+ EV RR+ R+ Sbjct: 687 LYEVERGKTRLTYDPEAKGKKIPVEEWLKMMGKTRHLLKPEFAEVLEEFKQEVDRRFRRI 746 Query: 661 KAKHEHPDL 669 KA EHPDL Sbjct: 747 KAMSEHPDL 755 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.136 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,151,824,771 Number of extensions: 180782110 Number of successful extensions: 410528 Number of sequences better than 1.0e-05: 1118 Number of HSP's gapped: 408211 Number of HSP's successfully gapped: 1119 Length of query: 669 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 526 Effective length of database: 1,713,491,058 Effective search space: 901296296508 Effective search space used: 901296296508 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)