BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0369.0020.p (367 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6LR11.1 A6LR11_CLOB8 NMT1/THI5-like protein 435 e-120 A3DFR7.1 A3DFR7_CLOTH Extracellular solute-binding protein, fami... 256 2e-66 B4BA97.1 B4BA97_CLOTM NMT1/THI5 like domain protein 256 2e-66 Q8GGI9.1 Q8GGI9_LACPL Abc1 241 1e-61 C2FRK3.1 C2FRK3_LACPL Abc1 like protein 240 1e-61 >A6LR11.1 A6LR11_CLOB8 NMT1/THI5-like protein Length = 332 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 207/305 (67%), Positives = 239/305 (78%) Query: 59 NGSKAAPASYKYGKLKIQALSGAVCGAPSYVAYEKGFFAEEGLDVELVSGSMDAMKTGLT 118 N +A + YKYGKLKIQALSGAVCGAP+YVAYEKGFF EEGLDVELVSG++D KTGL Sbjct: 26 NVDQAVNSEYKYGKLKIQALSGAVCGAPAYVAYEKGFFKEEGLDVELVSGTLDENKTGLA 85 Query: 119 TGEFTVTNGDFVWFTSIQQGLDLKVIGGLHHGCIKLVVPPGSSIKTAADLKGKRIGVDEI 178 TGEF VTNGDF WF SIQQG++LKVIGGLH GCIK+V+PP S IKTAADLKGK IGVDEI Sbjct: 86 TGEFVVTNGDFQWFPSIQQGMNLKVIGGLHKGCIKIVLPPNSPIKTAADLKGKNIGVDEI 145 Query: 179 GGVPMAVASVVLTNAGLDPQKDAEWLAYPLDQLQEGVKKGEIDAYAAWDPFGKLAEVNDG 238 GG PM+VA++VL NAG++PQ + W YPLDQL E V KGE+DA+AAWDPFG LA N+G Sbjct: 146 GGTPMSVATIVLANAGINPQTEVTWKPYPLDQLNEAVSKGEVDAFAAWDPFGTLAVENNG 205 Query: 239 YTVLADISTDHNFAGKSCCFLYASGKQIKKDPERVXXXXXXXXXXXXXXXGHPEETAKLE 298 YTVL DISTD F GKSCCFLYAS QIK++P++V HPEETA+LE Sbjct: 206 YTVLTDISTDPLFKGKSCCFLYASENQIKENPDKVKAIARAYQKADAWIKEHPEETAQLE 265 Query: 299 IDKKYVATDDIKLVTDLIKSYHFNYTTDAAREDIRYFVKQFSQTGFLKKDTDPEAFLKSA 358 IDKKY+A+DD+KLVT LIKSY F YTTD A++DI YFVK+ +TGFLK +TDP F Sbjct: 266 IDKKYIASDDVKLVTQLIKSYDFEYTTDTAKDDISYFVKKLDKTGFLKDNTDPAQFANDT 325 Query: 359 YYDVF 363 YYD+ Sbjct: 326 YYDIL 330 >A3DFR7.1 A3DFR7_CLOTH Extracellular solute-binding protein, family 3 Length = 353 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 140/322 (43%), Positives = 186/322 (57%), Gaps = 15/322 (4%) Query: 54 NASGT--NG-SKAAPASYKYGKLKIQALSGAVCGAPSYVAYEKGFFAEEGLDVELVSGSM 110 N GT NG + + A YKYGK+ I G++CGAP Y+AYEKGFF +EG DV L+S Sbjct: 28 NTGGTQDNGKTGTSSAEYKYGKIDIPGKDGSLCGAPIYIAYEKGFFKQEGFDVNLISADT 87 Query: 111 DAMKTGLTTGEFTVTNGDFVWFTSIQQGLDLKVIGGLHHGCIKLVVPPGSSIKTAADLKG 170 + K GL G + NGDF +F SI+ + +KV+ GLH+GCIKL+VP S I+ DL+G Sbjct: 88 ETRKIGLNNGTIPIVNGDFQFFPSIENNVKVKVVDGLHYGCIKLIVPKDSPIQGVQDLRG 147 Query: 171 KRIGVDEIGGVPMAVASVVLTNAGLDP-QKDAEWLAYPL---DQLQEGVKKGEIDAYAAW 226 K+I VDEIGG P VASV L G+ Q+D E P + E ++KGE+D A W Sbjct: 148 KKISVDEIGGTPHQVASVWLEKNGISAKQEDGEVTFLPFSDGNLAVEALRKGEVDVAALW 207 Query: 227 DPFGKLAEVNDGYTVLADISTDHNFAGKSCCFLYASGKQIKKDPERVXXXXXXXXXXXXX 286 DPFG + E Y V+ DIS D FAGK CCFLYAS K + + PE+V Sbjct: 208 DPFGSVQEKTGNYRVILDISKDEPFAGKYCCFLYASEKLLDEKPEQVAALLRAYRAAQNW 267 Query: 287 XXGHPEETAKLEIDKKYVATDDIKLVTDLIKSYHF------NYTTDAAREDIRYFVKQFS 340 +PEE + I+ KY +D +L LIKSY + R+++ YF +Q + Sbjct: 268 ISENPEEAVDIIINGKYAQIEDRELAIKLIKSYQYPSYAEREKNKTQVRDNVYYFAEQLN 327 Query: 341 QTGFLKKDTDPEAFLKSAYYDV 362 Q G+LK TDP+ F K+AY +V Sbjct: 328 QIGYLK--TDPDTFTKNAYVEV 347 >B4BA97.1 B4BA97_CLOTM NMT1/THI5 like domain protein Length = 353 Score = 256 bits (655), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 140/322 (43%), Positives = 186/322 (57%), Gaps = 15/322 (4%) Query: 54 NASGT--NG-SKAAPASYKYGKLKIQALSGAVCGAPSYVAYEKGFFAEEGLDVELVSGSM 110 N GT NG + + A YKYGK+ I G++CGAP Y+AYEKGFF +EG DV L+S Sbjct: 28 NTGGTQDNGKTGTSSAEYKYGKIDIPGKDGSLCGAPIYIAYEKGFFKQEGFDVNLISADT 87 Query: 111 DAMKTGLTTGEFTVTNGDFVWFTSIQQGLDLKVIGGLHHGCIKLVVPPGSSIKTAADLKG 170 + K GL G + NGDF +F SI+ + +KV+ GLH+GCIKL+VP S I+ DL+G Sbjct: 88 ETRKIGLNNGTIPIVNGDFQFFPSIENNVKVKVVDGLHYGCIKLIVPKDSPIQGVQDLRG 147 Query: 171 KRIGVDEIGGVPMAVASVVLTNAGLDP-QKDAEWLAYPL---DQLQEGVKKGEIDAYAAW 226 K+I VDEIGG P VASV L G+ Q+D E P + E ++KGE+D A W Sbjct: 148 KKISVDEIGGTPHQVASVWLEKNGISAKQEDGEVTFLPFSDGNLAVEALRKGEVDVAALW 207 Query: 227 DPFGKLAEVNDGYTVLADISTDHNFAGKSCCFLYASGKQIKKDPERVXXXXXXXXXXXXX 286 DPFG + E Y V+ DIS D FAGK CCFLYAS K + + PE+V Sbjct: 208 DPFGSVQEKTGNYRVILDISKDEPFAGKYCCFLYASEKLLDEKPEQVAALLRAYRAAQNW 267 Query: 287 XXGHPEETAKLEIDKKYVATDDIKLVTDLIKSYHF------NYTTDAAREDIRYFVKQFS 340 +PEE + I+ KY +D +L LIKSY + R+++ YF +Q + Sbjct: 268 ISENPEEAVDIIINGKYAQIEDRELAIKLIKSYQYPSYAEREKNKTQVRDNVYYFAEQLN 327 Query: 341 QTGFLKKDTDPEAFLKSAYYDV 362 Q G+LK TDP+ F K+AY +V Sbjct: 328 QIGYLK--TDPDTFTKNAYVEV 347 >Q8GGI9.1 Q8GGI9_LACPL Abc1 Length = 350 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 117/311 (37%), Positives = 179/311 (57%), Gaps = 20/311 (6%) Query: 67 SYKYGKLKIQALSGAVCGAPSYVAYEKGFFAEEGLDVELVSGSMDA--MKTGLTTGEFTV 124 +YKYG++ I A G++C AP+Y+AYEKGFF + G+ +LV+ D ++ G +G++ Sbjct: 36 TYKYGEVTIPAKDGSICNAPNYIAYEKGFFKKNGIKAKLVANPRDISDLEAGFASGKYDA 95 Query: 125 TNGDFVWFTSIQQGLDLKVIGGLHHGCIKLVVPPGSSIKTAADLKGKRIGVDEIGGVPMA 184 NGDF + +IQ G +K +GG+H GCIKL+VP SSIK+ DLKGK IG+ G P Sbjct: 96 QNGDFQYLPAIQNGAQIKAVGGIHQGCIKLLVPKNSSIKSVKDLKGKTIGIPAQGSTPQY 155 Query: 185 VASVVLTNAGLDPQKDAEWLAYPLDQLQEGVKKGEIDAYAAWDPFGKLAEVNDGYTVLAD 244 V S+ L +AG+DP+ W Y D L + +KG++DA DP+ A+ G+ + D Sbjct: 156 VTSIALQHAGIDPKTGVTWRVYSTDLLAKAAEKGQVDAIGTVDPYAYQAQKESGFKTIID 215 Query: 245 ISTDHNFAGK------------SCCFLYASGKQIKKDPERVXXXXXXXXXXXXXXXGHPE 292 ++N +G +CC+LY S K +K++P + HPE Sbjct: 216 ---NNNNSGNAKMAAMGMKSKGACCYLYVSSKLVKENPAKAKAIVRSYKQAAAWINNHPE 272 Query: 293 ETAKLEIDKKYVATD---DIKLVTDLIKSYHFNYTTDAAREDIRYFVKQFSQTGFLKKDT 349 ETAK+E++K YV+ ++K VT ++K HF +ED+ Y++KQ Q G+LKK+T Sbjct: 273 ETAKIELNKGYVSKTKFINVKNVTQILKDEHFELNLKTGKEDLSYYIKQLKQAGYLKKNT 332 Query: 350 DPEAFLKSAYY 360 + + LK AY+ Sbjct: 333 NNKQLLKQAYW 343 >C2FRK3.1 C2FRK3_LACPL Abc1 like protein Length = 350 Score = 240 bits (613), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 117/311 (37%), Positives = 179/311 (57%), Gaps = 20/311 (6%) Query: 67 SYKYGKLKIQALSGAVCGAPSYVAYEKGFFAEEGLDVELVSGSMDA--MKTGLTTGEFTV 124 +YKYG++ I A G++C AP+Y+AYEKGFF + G+ +LV+ D ++ G +G++ Sbjct: 36 TYKYGEVTIPAKDGSICNAPNYIAYEKGFFKKNGIKAKLVANPRDISDLEAGFASGKYDA 95 Query: 125 TNGDFVWFTSIQQGLDLKVIGGLHHGCIKLVVPPGSSIKTAADLKGKRIGVDEIGGVPMA 184 NGDF + +IQ G +K +GG+H GCIKL+VP SSIK+ DLKGK IG+ G P Sbjct: 96 QNGDFQYLPAIQNGAQIKAVGGIHQGCIKLLVPKNSSIKSVKDLKGKTIGIPAQGSTPQY 155 Query: 185 VASVVLTNAGLDPQKDAEWLAYPLDQLQEGVKKGEIDAYAAWDPFGKLAEVNDGYTVLAD 244 V S+ L +AG+DP+ W Y D L + +KG++DA DP+ A+ G+ + D Sbjct: 156 VTSIALQHAGIDPKTGVTWKVYSTDLLAKAAEKGQVDAIGTVDPYAYQAQKESGFKTIID 215 Query: 245 ISTDHNFAGK------------SCCFLYASGKQIKKDPERVXXXXXXXXXXXXXXXGHPE 292 ++N +G +CC+LY S K +K++P + HPE Sbjct: 216 ---NNNNSGNAKMAAMGMKSKGACCYLYVSSKLVKENPAKAKAIVRSYKQAAAWINNHPE 272 Query: 293 ETAKLEIDKKYVATD---DIKLVTDLIKSYHFNYTTDAAREDIRYFVKQFSQTGFLKKDT 349 ETAK+E++K YV+ ++K VT ++K HF +ED+ Y++KQ Q G+LKK+T Sbjct: 273 ETAKIELNKGYVSKTKFINVKNVTQILKDEHFELNLKTGKEDLSYYIKQLKQAGYLKKNT 332 Query: 350 DPEAFLKSAYY 360 + + LK AY+ Sbjct: 333 NNKQLLKQAYW 343 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.133 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,012,341,412 Number of extensions: 82823055 Number of successful extensions: 186721 Number of sequences better than 1.0e-05: 267 Number of HSP's gapped: 187286 Number of HSP's successfully gapped: 267 Length of query: 367 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 230 Effective length of database: 1,770,017,148 Effective search space: 407103944040 Effective search space used: 407103944040 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 132 (55.5 bits)