BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0369.0019.p (490 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6LR13.1 A6LR13_CLOB8 ABC transporter related 355 8e-96 B9E385.1 B9E385_CLOK1 Putative uncharacterized protein 352 6e-95 A5MZ90.1 A5MZ90_CLOK5 Predicted ABC transporter, ATP-binding pro... 352 6e-95 B9XK91.1 B9XK91_9BACT ABC transporter related-protein 305 5e-81 A3DFR9.1 A3DFR9_CLOTH ABC transporter related protein 296 4e-78 >A6LR13.1 A6LR13_CLOB8 ABC transporter related Length = 266 Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 160/257 (62%), Positives = 203/257 (78%) Query: 234 GAVEIRGVSRIYEEASGQKFIALKEIDLELAPGSFVSFIGPSGCGKTTLMRLIAGLDDCT 293 G++ ++ V R Y +A+G + ALK I+L + G F+SFIGPSGCGKTTLMRLIAGLD+ Sbjct: 10 GSITVKNVFRTYIDANGNEVEALKNINLNIESGEFISFIGPSGCGKTTLMRLIAGLDEAQ 69 Query: 294 TGEITLDGARIQGTHYERGYVFQQANLFPWMNIRQNIAAGLKARRVYQQNRKKPDEYLEL 353 GE+ LDG +I GT YERGYVFQQANLFPW NI N++AGL+AR++Y++++++ Y+E+ Sbjct: 70 EGELFLDGEKINGTSYERGYVFQQANLFPWQNIEDNVSAGLRARKIYKEHKEEVSHYIEI 129 Query: 354 VGLSGFGNAYPHQVSGGMAQRASLARALINEPKVLMLDEPLGALDAFTRMNLQDELLRLW 413 GL GF +YPHQ+SGGMAQRASL RALIN PKVL+LDEPLGALD+FTR LQD+LL LW Sbjct: 130 AGLKGFEKSYPHQISGGMAQRASLVRALINSPKVLLLDEPLGALDSFTRFALQDKLLELW 189 Query: 414 RLRGTTMILVTHDVDEAVYLSGRIVVMSSRPGQIKEIVEVGMAHPRDRNSQEFIHLRSRI 473 + R TMILVTHDVDEAVYLS RIV+MS RPG+I+E+++V + PR+R S +F+ LR RI Sbjct: 190 KERENTMILVTHDVDEAVYLSNRIVIMSPRPGKIEEVIDVNLRRPRNRTSDDFLKLRKRI 249 Query: 474 LETLHFAGSSKSLEYYL 490 LE L+ K LEYYL Sbjct: 250 LEKLNLVSKPKDLEYYL 266 >B9E385.1 B9E385_CLOK1 Putative uncharacterized protein Length = 266 Score = 352 bits (903), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 164/268 (61%), Positives = 210/268 (78%), Gaps = 3/268 (1%) Query: 215 MAKGAGEMSEAQAQAKVGRGAVEIRGVSRIYEEASGQKFIALKEIDLELAPGSFVSFIGP 274 MAKGA +M+ + A A+EI+ V R Y +A+G AL+ ++L + G F+SF+G Sbjct: 1 MAKGAVKMTRSIA---FNNAAIEIKNVDRTYIDANGNLVEALRNVNLSIRAGEFISFVGS 57 Query: 275 SGCGKTTLMRLIAGLDDCTTGEITLDGARIQGTHYERGYVFQQANLFPWMNIRQNIAAGL 334 SGCGKTTLMRLIAGLD +GE+ LD +I+ T++ERGYVFQQANLFPW I NIAAGL Sbjct: 58 SGCGKTTLMRLIAGLDKPQSGELFLDDKKIESTNFERGYVFQQANLFPWETIEDNIAAGL 117 Query: 335 KARRVYQQNRKKPDEYLELVGLSGFGNAYPHQVSGGMAQRASLARALINEPKVLMLDEPL 394 KAR++Y++++ + EY++L GL GF +YPHQVSGGMAQRASLARALIN PKVL+LDEPL Sbjct: 118 KARKIYREHKSEVGEYIKLTGLQGFEKSYPHQVSGGMAQRASLARALINNPKVLLLDEPL 177 Query: 395 GALDAFTRMNLQDELLRLWRLRGTTMILVTHDVDEAVYLSGRIVVMSSRPGQIKEIVEVG 454 GALDAFTRM+LQD+L+ LW+ RGTTM+LVTHDVDEA+YLS RIV+M+ RPG+I+++VEV Sbjct: 178 GALDAFTRMDLQDKLIELWQKRGTTMVLVTHDVDEAIYLSDRIVIMTPRPGKIEDVVEVK 237 Query: 455 MAHPRDRNSQEFIHLRSRILETLHFAGS 482 + PR+RN EFI +R +ILE LH A Sbjct: 238 INRPRNRNESEFIEIRKQILEKLHLANK 265 >A5MZ90.1 A5MZ90_CLOK5 Predicted ABC transporter, ATP-binding protein Length = 266 Score = 352 bits (903), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 164/268 (61%), Positives = 210/268 (78%), Gaps = 3/268 (1%) Query: 215 MAKGAGEMSEAQAQAKVGRGAVEIRGVSRIYEEASGQKFIALKEIDLELAPGSFVSFIGP 274 MAKGA +M+ + A A+EI+ V R Y +A+G AL+ ++L + G F+SF+G Sbjct: 1 MAKGAVKMTRSIA---FNNAAIEIKNVDRTYIDANGNLVEALRNVNLSIRAGEFISFVGS 57 Query: 275 SGCGKTTLMRLIAGLDDCTTGEITLDGARIQGTHYERGYVFQQANLFPWMNIRQNIAAGL 334 SGCGKTTLMRLIAGLD +GE+ LD +I+ T++ERGYVFQQANLFPW I NIAAGL Sbjct: 58 SGCGKTTLMRLIAGLDKPQSGELFLDDKKIESTNFERGYVFQQANLFPWETIEDNIAAGL 117 Query: 335 KARRVYQQNRKKPDEYLELVGLSGFGNAYPHQVSGGMAQRASLARALINEPKVLMLDEPL 394 KAR++Y++++ + EY++L GL GF +YPHQVSGGMAQRASLARALIN PKVL+LDEPL Sbjct: 118 KARKIYREHKSEVGEYIKLTGLQGFEKSYPHQVSGGMAQRASLARALINNPKVLLLDEPL 177 Query: 395 GALDAFTRMNLQDELLRLWRLRGTTMILVTHDVDEAVYLSGRIVVMSSRPGQIKEIVEVG 454 GALDAFTRM+LQD+L+ LW+ RGTTM+LVTHDVDEA+YLS RIV+M+ RPG+I+++VEV Sbjct: 178 GALDAFTRMDLQDKLIELWQKRGTTMVLVTHDVDEAIYLSDRIVIMTPRPGKIEDVVEVK 237 Query: 455 MAHPRDRNSQEFIHLRSRILETLHFAGS 482 + PR+RN EFI +R +ILE LH A Sbjct: 238 INRPRNRNESEFIEIRKQILEKLHLANK 265 >B9XK91.1 B9XK91_9BACT ABC transporter related-protein Length = 266 Score = 305 bits (782), Expect = 5e-81, Method: Compositional matrix adjust. Identities = 142/253 (56%), Positives = 184/253 (72%), Gaps = 2/253 (0%) Query: 234 GAVEIRGVSRIYEEASGQKF--IALKEIDLELAPGSFVSFIGPSGCGKTTLMRLIAGLDD 291 ++ G+S+ Y ++ +AL + L + G VS IGPSGCGK+TL+RL AGLD Sbjct: 11 ASLRFTGISKDYPTPDNEELRTLALDNVSLSVGAGELVSLIGPSGCGKSTLLRLTAGLDQ 70 Query: 292 CTTGEITLDGARIQGTHYERGYVFQQANLFPWMNIRQNIAAGLKARRVYQQNRKKPDEYL 351 +GE+ + +I G ERG VFQ NLFPW+ +R+NI +GL AR ++ R + DE++ Sbjct: 71 SNSGELWVGNEKIIGPSAERGLVFQDPNLFPWLTVRKNIESGLVARGKLKEKRHEVDEFM 130 Query: 352 ELVGLSGFGNAYPHQVSGGMAQRASLARALINEPKVLMLDEPLGALDAFTRMNLQDELLR 411 LVGL F NAYPH +SGGMAQR +LARALIN PKVL+LDEPLGALDAFTRM +QDE+LR Sbjct: 131 RLVGLETFANAYPHHLSGGMAQRVALARALINHPKVLLLDEPLGALDAFTRMRMQDEVLR 190 Query: 412 LWRLRGTTMILVTHDVDEAVYLSGRIVVMSSRPGQIKEIVEVGMAHPRDRNSQEFIHLRS 471 LW+ RGTTM+LVTHD+DEA+Y+S RIV+M+ RPG+I+ + V + PR RNS EF++LR Sbjct: 191 LWQARGTTMVLVTHDIDEAIYMSDRIVIMTPRPGRIERTISVNLQRPRQRNSSEFLNLRG 250 Query: 472 RILETLHFAGSSK 484 ILE LHFAGS K Sbjct: 251 EILEMLHFAGSPK 263 >A3DFR9.1 A3DFR9_CLOTH ABC transporter related protein Length = 267 Score = 296 bits (757), Expect = 4e-78, Method: Compositional matrix adjust. Identities = 140/253 (55%), Positives = 181/253 (71%) Query: 236 VEIRGVSRIYEEASGQKFIALKEIDLELAPGSFVSFIGPSGCGKTTLMRLIAGLDDCTTG 295 + I V+ Y + +G L++I+L + G F+S IG SGCGKTTL+RLIAGLD TG Sbjct: 13 LHIENVNYTYYDDAGNHVEVLRDINLSVRRGEFLSIIGSSGCGKTTLLRLIAGLDKPETG 72 Query: 296 EITLDGARIQGTHYERGYVFQQANLFPWMNIRQNIAAGLKARRVYQQNRKKPDEYLELVG 355 + L+G +I G ERGYVFQ LF W+ + +NIA GLKAR VY++N+ + Y++L+G Sbjct: 73 TLILNGEQISGPDPERGYVFQHGGLFQWLTVEKNIATGLKARHVYRENKHRIAHYIDLIG 132 Query: 356 LSGFGNAYPHQVSGGMAQRASLARALINEPKVLMLDEPLGALDAFTRMNLQDELLRLWRL 415 L GF YPHQ+SGGMAQR ++ARALIN PKVL+LDEP+ ALD+FTR ++QD+LL L + Sbjct: 133 LKGFEKCYPHQLSGGMAQRVAIARALINNPKVLLLDEPMSALDSFTRSDIQDKLLELHKE 192 Query: 416 RGTTMILVTHDVDEAVYLSGRIVVMSSRPGQIKEIVEVGMAHPRDRNSQEFIHLRSRILE 475 TTMILVTHDVDEA+YLS RIVVM+ RPG+I EI+E+ + HPR R EF+ LR ILE Sbjct: 193 NKTTMILVTHDVDEAIYLSDRIVVMTPRPGKISEIMEINLPHPRHRGGTEFLSLRRNILE 252 Query: 476 TLHFAGSSKSLEY 488 LH A + EY Sbjct: 253 KLHLASALPQPEY 265 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.324 0.140 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,691,387,993 Number of extensions: 110250235 Number of successful extensions: 793361 Number of sequences better than 1.0e-05: 92642 Number of HSP's gapped: 671122 Number of HSP's successfully gapped: 98382 Length of query: 490 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 350 Effective length of database: 1,741,754,103 Effective search space: 609613936050 Effective search space used: 609613936050 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.5 bits) S2: 133 (55.8 bits)