BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0369.0013.p (220 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZJW5.1 C0ZJW5_BREBN Putative uncharacterized protein 171 3e-41 C2W6D3.1 C2W6D3_BACCE Putative uncharacterized protein 150 6e-35 B8G2I6.1 B8G2I6_DESHD ABC-2 type transporter 150 1e-34 C3BIK5.1 C3BIK5_9BACI Putative uncharacterized protein 149 2e-34 Q24VL5.1 Q24VL5_DESHY Putative uncharacterized protein 149 2e-34 >C0ZJW5.1 C0ZJW5_BREBN Putative uncharacterized protein Length = 271 Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 79/189 (41%), Positives = 119/189 (62%) Query: 11 LAELSKQHRNRSRGKVVFFSLLLWPALGFLTSYFTMKPYRSGTGSVLSQIIPDERIPLFL 70 LAE+ K+HR+ K+++FSLL+WP + F+T+Y++ P++ G S L++ I E++PLFL Sbjct: 9 LAEIIKEHRHSFHSKMIYFSLLVWPVINFVTAYYSFAPFQMGADSPLARFISYEQLPLFL 68 Query: 71 LSGYLVFQLFWTVVEAAWLFELERKGGTVEAVFLTPAPKMAFLYGRSLYSLFHGIWMFAV 130 L+GYL + +W +V+++W ER+ GT+E +F++P ++AFLYGRSL SL G+W+F Sbjct: 69 LTGYLGYIFYWCLVQSSWQMSFERQAGTMEMIFISPVNRLAFLYGRSLSSLIEGVWLFFC 128 Query: 131 FSLLTFLFVSDASTVNWXXXXXXXXXXXXXXXXWGALLCAVSLFSRESSFLYYIFQTPME 190 F LL FV W WG LC + LFSR++SFLY + PM Sbjct: 129 FVLLALFFVDGIQLSGWWAPPLAFLILLVSAIVWGGFLCVLFLFSRDASFLYTVLDEPML 188 Query: 191 LFGGVRIPP 199 +F GVR+PP Sbjct: 189 IFSGVRLPP 197 >C2W6D3.1 C2W6D3_BACCE Putative uncharacterized protein Length = 265 Score = 150 bits (380), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 75/188 (39%), Positives = 114/188 (60%) Query: 11 LAELSKQHRNRSRGKVVFFSLLLWPALGFLTSYFTMKPYRSGTGSVLSQIIPDERIPLFL 70 LAE K HRN K+V+FSL +WP L F T+YF++KP+ + + S L++ + +I FL Sbjct: 3 LAEWKKSHRNHFHSKMVYFSLFIWPVLLFATAYFSVKPFDTSSSSPLAKWMDPTQITFFL 62 Query: 71 LSGYLVFQLFWTVVEAAWLFELERKGGTVEAVFLTPAPKMAFLYGRSLYSLFHGIWMFAV 130 L+GY+ + FW++V++AW ER+ GT+E +FLTPA ++ +Y R+ +L G+WMF Sbjct: 63 LTGYIGYVFFWSLVQSAWQMSWERQNGTLELIFLTPASRVWMMYCRAGANLIEGVWMFTF 122 Query: 131 FSLLTFLFVSDASTVNWXXXXXXXXXXXXXXXXWGALLCAVSLFSRESSFLYYIFQTPME 190 FS+L LF++D+ WG L + LFSR++S L+ I + PM+ Sbjct: 123 FSILIALFLNDSPVPPVENMLFAFLILCISAVVWGGCLNTIFLFSRDASILFTILEEPMQ 182 Query: 191 LFGGVRIP 198 F GVRIP Sbjct: 183 FFAGVRIP 190 >B8G2I6.1 B8G2I6_DESHD ABC-2 type transporter Length = 271 Score = 150 bits (378), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 108/187 (57%) Query: 12 AELSKQHRNRSRGKVVFFSLLLWPALGFLTSYFTMKPYRSGTGSVLSQIIPDERIPLFLL 71 AE+ K HR +++FSLL+WPA+ ++++Y++ KP+ G S L++ + E I LFLL Sbjct: 10 AEMKKSHRLNFHSSLIYFSLLVWPAITYVSAYYSFKPFDLGEYSPLNRFLSAENIGLFLL 69 Query: 72 SGYLVFQLFWTVVEAAWLFELERKGGTVEAVFLTPAPKMAFLYGRSLYSLFHGIWMFAVF 131 +GYL + FW++V++AW ER GT+E +FL+P ++ +YGR+ L G+W+F+ F Sbjct: 70 TGYLGYIFFWSLVQSAWQMSFERYAGTIELIFLSPVSRLGVIYGRAAADLLAGVWLFSTF 129 Query: 132 SLLTFLFVSDASTVNWXXXXXXXXXXXXXXXXWGALLCAVSLFSRESSFLYYIFQTPMEL 191 + L + V W WG L + LFSR+S FLY I PM + Sbjct: 130 AFLAAVLVGGVQIAGWWSVPLGLLVLAVSAVIWGGFLNVIFLFSRDSGFLYTILDEPMLI 189 Query: 192 FGGVRIP 198 F GVRIP Sbjct: 190 FSGVRIP 196 >C3BIK5.1 C3BIK5_9BACI Putative uncharacterized protein Length = 265 Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 73/187 (39%), Positives = 113/187 (60%) Query: 12 AELSKQHRNRSRGKVVFFSLLLWPALGFLTSYFTMKPYRSGTGSVLSQIIPDERIPLFLL 71 AE K HRN K+V+FSL +WP L F T+YF++KP+ + S L++ + ++I FL+ Sbjct: 4 AEWKKSHRNHFHSKMVYFSLFIWPVLLFATAYFSVKPFDTSNTSPLAKWMDPKQISFFLI 63 Query: 72 SGYLVFQLFWTVVEAAWLFELERKGGTVEAVFLTPAPKMAFLYGRSLYSLFHGIWMFAVF 131 +GY+ + FW++V++AW ER+ GT+E +FLTPA ++ +Y R+ +L G+WMF +F Sbjct: 64 TGYIGYVFFWSLVQSAWQMSWERQNGTLELIFLTPASRVWMMYCRAGANLIEGVWMFTMF 123 Query: 132 SLLTFLFVSDASTVNWXXXXXXXXXXXXXXXXWGALLCAVSLFSRESSFLYYIFQTPMEL 191 S+L LF++D WG L + LFSR++S L+ I + PM+ Sbjct: 124 SILIALFLNDTPIPPVENIVFAFMILCISAVVWGGCLNTIFLFSRDASILFTILEEPMQF 183 Query: 192 FGGVRIP 198 F GVRIP Sbjct: 184 FAGVRIP 190 >Q24VL5.1 Q24VL5_DESHY Putative uncharacterized protein Length = 271 Score = 149 bits (375), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 71/187 (37%), Positives = 108/187 (57%) Query: 12 AELSKQHRNRSRGKVVFFSLLLWPALGFLTSYFTMKPYRSGTGSVLSQIIPDERIPLFLL 71 AE+ K HR +++FSLL+WPA+ ++++Y++ KP+ G S L++ + E I LFLL Sbjct: 10 AEMKKSHRLNFHSSLIYFSLLVWPAITYVSAYYSFKPFDLGEYSPLNRFLNAENIGLFLL 69 Query: 72 SGYLVFQLFWTVVEAAWLFELERKGGTVEAVFLTPAPKMAFLYGRSLYSLFHGIWMFAVF 131 +GYL + FW++V++AW ER GT+E +FL+P ++ +YGR+ L G+W+F+ F Sbjct: 70 TGYLGYIFFWSLVQSAWQMSFERYAGTIELIFLSPVSRLGVIYGRAAADLLAGVWLFSTF 129 Query: 132 SLLTFLFVSDASTVNWXXXXXXXXXXXXXXXXWGALLCAVSLFSRESSFLYYIFQTPMEL 191 + L + V W WG L + LFSR+S FLY I PM + Sbjct: 130 AFLAAVLVGGVHLAGWWSVPLGLLILAFSAVIWGGFLNVIFLFSRDSGFLYTILDEPMLI 189 Query: 192 FGGVRIP 198 F GVRIP Sbjct: 190 FSGVRIP 196 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.327 0.141 0.462 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,225,370,416 Number of extensions: 44054846 Number of successful extensions: 116782 Number of sequences better than 1.0e-05: 8 Number of HSP's gapped: 116774 Number of HSP's successfully gapped: 8 Length of query: 220 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 90 Effective length of database: 1,835,964,253 Effective search space: 165236782770 Effective search space used: 165236782770 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 128 (53.9 bits)