BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0369.0001.p
         (154 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KIM8.1 B3KIM8_9BACI Putative uncharacterized protein                191   2e-47
Q0HS15.1 Q0HS15_SHESR Putative uncharacterized protein                 55   2e-06
A6Y4R7.1 A6Y4R7_VIBCH Putative uncharacterized protein (Fragment)      54   3e-06

>B3KIM8.1 B3KIM8_9BACI Putative uncharacterized protein
          Length = 154

 Score =  191 bits (485), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/154 (60%), Positives = 111/154 (72%)

Query: 1   MKDTQVPESEQSKELFAYFGLAVYYCXXXXXXXXXXXXXXXXXXGETPTEADLAELYQRK 60
           MK T++ +S+ SKELFAYFGLAVYY                   G  P+E D  +LYQRK
Sbjct: 1   MKQTRLLDSDHSKELFAYFGLAVYYSQALEQQLANLLMLIKLSQGNVPSEEDFTQLYQRK 60

Query: 61  LSNSLGQLIKEIQHHFPFSEEETNQLQAVWKQRNHIVHDYFKERIQETFTPAGRAHMIRE 120
           LS+SLGQL+ EIQH+FPFSEEET QL+ VWKQRN+IVHDYFKERI ETF+PAGR+ MIRE
Sbjct: 61  LSSSLGQLVHEIQHYFPFSEEETLQLKEVWKQRNYIVHDYFKERIHETFSPAGRSRMIRE 120

Query: 121 LKRFKNKACRLEIKLQGYCTELYSKLGLEEENLI 154
           L  FK++A  LE KLQGY  E+Y KLGL+ E  +
Sbjct: 121 LTAFKDQAQALEQKLQGYSREMYIKLGLDSEKSV 154


>Q0HS15.1 Q0HS15_SHESR Putative uncharacterized protein
          Length = 172

 Score = 55.5 bits (132), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 65/149 (43%), Gaps = 2/149 (1%)

Query: 5   QVPESEQ--SKELFAYFGLAVYYCXXXXXXXXXXXXXXXXXXGETPTEADLAELYQRKLS 62
           ++PE +    KE +A+FGLA Y+                       ++     +Y     
Sbjct: 4   EIPEIDNCCEKETYAFFGLAAYWAQVLEHSALNLAIVLNLPGASLMSQEIFDNIYSTLTK 63

Query: 63  NSLGQLIKEIQHHFPFSEEETNQLQAVWKQRNHIVHDYFKERIQETFTPAGRAHMIRELK 122
            + GQL+K  +     SE + + L    + RN ++H YF+E  +   +  GR  + +EL+
Sbjct: 64  KTFGQLLKSTKGILNISEADESYLSEALELRNILIHHYFREHAENLVSTVGRQEIKKELQ 123

Query: 123 RFKNKACRLEIKLQGYCTELYSKLGLEEE 151
              +K  R +  L+G    L+ + G+ EE
Sbjct: 124 LIISKFKRADKILEGIYAPLWEEYGVTEE 152


>A6Y4R7.1 A6Y4R7_VIBCH Putative uncharacterized protein (Fragment)
          Length = 394

 Score = 54.3 bits (129), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 61/143 (42%)

Query: 8   ESEQSKELFAYFGLAVYYCXXXXXXXXXXXXXXXXXXGETPTEADLAELYQRKLSNSLGQ 67
           ES   +E+FA++GLA +                        TE    ELY+R  SN+ G+
Sbjct: 18  ESGDQQEVFAFYGLASFKAQCAEKALVNFVMGYKLVDDSALTEEQWLELYERLNSNTFGR 77

Query: 68  LIKEIQHHFPFSEEETNQLQAVWKQRNHIVHDYFKERIQETFTPAGRAHMIRELKRFKNK 127
           L+  I+      +   + L    ++RN + HD+F +       P GR  M+ EL+     
Sbjct: 78  LLGHIKKRVELPDALVDHLDLALQKRNWLAHDFFYDYAVHMTEPTGRIQMVTELQSLITM 137

Query: 128 ACRLEIKLQGYCTELYSKLGLEE 150
               +  ++   + ++ + G+++
Sbjct: 138 FQIADRAVEKLSSAVWREFGIDD 160


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.134    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 797,741,390
Number of extensions: 26853643
Number of successful extensions: 64964
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 64961
Number of HSP's successfully gapped: 3
Length of query: 154
Length of database: 3,060,696,203
Length adjustment: 116
Effective length of query: 38
Effective length of database: 1,967,858,463
Effective search space: 74778621594
Effective search space used: 74778621594
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)