BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0368.0037.p (471 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q65IM2.1 Q65IM2_BACLD Putative uncharacterized protein 264 2e-68 Q2B896.1 Q2B896_9BACI Putative uncharacterized protein 234 2e-59 B1DB52.1 B1DB52_9BACL Glycosyl transferase group 1 226 5e-57 B1DB51.1 B1DB51_9BACL Glycosyl transferase group 1 209 7e-52 Q2B0U2.1 Q2B0U2_9BACI Putative uncharacterized protein 201 9e-50 >Q65IM2.1 Q65IM2_BACLD Putative uncharacterized protein Length = 402 Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 161/417 (38%), Positives = 231/417 (55%), Gaps = 28/417 (6%) Query: 1 MKILLVTYWGLTNMGGIWTYMKQLADKLSEQGHEVTLMGSRAEDHTLYLLDQGISFDKKV 60 MKILL TYW + ++GG+WTYM QL + L GHEV L+G E+ ++++++ D+KV Sbjct: 1 MKILLATYWSIPHVGGVWTYMVQLKESLESMGHEVDLLGYGEENEIVHIVNE----DRKV 56 Query: 61 LYNSLLPQF----DTSRFPHLYLEHGILSFELGRYVFEGGAAVLGLEKYDVIHAQDPISA 116 LLP D FP LY + E+ RYV+E A LGLEKYD+IHAQD IS+ Sbjct: 57 KKEQLLPMIEQSVDQQSFPQLYDNQLVHFTEIQRYVYELAAIYLGLEKYDLIHAQDVISS 116 Query: 117 YAIRRIMKVRKPLVASFHGALAYESYFEYKGIEPELTRIDYEKRA-IWR-YFRRLEGLGV 174 ++R+ + PLVA+ HG++A+E I +LT I + + I R YF LE +G Sbjct: 117 GCLKRVKQKDTPLVATLHGSVAHE-------IRHQLTTIHRKSNSDIARAYFDHLERVGA 169 Query: 175 RSSDLILVSSNWIGQLVNRE-GAGRAGIHILPYGMDV----KQYDAKAA-MPAPLKFGDG 228 S+D +V++NW+ L+ +E I +L YG D+ K+ D K+A +P K Sbjct: 170 VSADATIVANNWLKNLLTKEFDTPEEQISVLHYGYDIDSFLKRKDTKSAEIPQTDK---- 225 Query: 229 LKVIMYAGRLEYIKGVHVLIGALGILQHSRRDWVCAIAGIGSLTEELQEQARELGIQDRV 288 K+I++ GRL KGV L+ AL L+ R DWVC IAG G L+ +LG+++ V Sbjct: 226 -KIILFTGRLVENKGVQHLLAALSHLKEVRDDWVCWIAGDGERMAGLRILCGQLGLENDV 284 Query: 289 FFTGKIDNIPAALTAADIYVQPSLQDTQPFSVTEAQLAGIAPIVAGTAGMPEMVQQGVTG 348 F K D++P L+ AD+YV PSL + QP SV EAQLAG+ IV+ G+PE+V+ VTG Sbjct: 285 VFMKKRDDVPYLLSIADVYVLPSLLENQPLSVIEAQLAGLPIIVSDAGGLPEIVEHNVTG 344 Query: 349 FVVPPEDNXXXXXXXXXXXGDDELRMRTGKQARSWAAQNRSLDGMAAGTLMAYHKAV 405 V P D D+ LR G A +A + ++D L Y + + Sbjct: 345 MVTPKGDAQAICNSINQLLEDETLRKTLGSNAHKFAMEYWNMDEAVNKVLDIYQQTL 401 >Q2B896.1 Q2B896_9BACI Putative uncharacterized protein Length = 409 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 142/409 (34%), Positives = 209/409 (51%), Gaps = 3/409 (0%) Query: 1 MKILLVTYWGLTNMGGIWTYMKQLADKLSEQGHEVTLMGSRAEDHTLYLLDQGISFDKKV 60 MKIL+ +++ L GGIWT++ +L ++L GH +T++ + +L Q ++ Sbjct: 1 MKILITSFYPLPYPGGIWTFVSKLKERLESMGHSITILSLNQDTLNYRILGQPEELTEQQ 60 Query: 61 LYNSLLPQFDTSRFPHLYLEHGILSFELGRYVFEGGAAVLGLEKYDVIHAQDPISAYAIR 120 + L + + +P I E+ R E A GL+ YDVI+AQD +SA I Sbjct: 61 VSAGLYEKVKRA-YPQQNTGSYIFQTEISRGFLELAALHYGLDGYDVIYAQDAMSAGVIS 119 Query: 121 RIMKVRKPLVASFHGALAYESYFEYKGIEPELTRIDYEKRAIWRYFRRLEGLGVRSSDLI 180 RI PLV S HG L+ E + K + P + + ++ +F LE LG SSD I Sbjct: 120 RIKPRGVPLVMSAHGYLSGEIFHYLKSLRPGAPDQELLQTDVYNFFHNLERLGYNSSDFI 179 Query: 181 LVSSNWIGQLV-NREGAGRAGIHILPYGMDVKQYDAKAAMPAPLKFGDGLKVIMYAGRLE 239 S W+ +L+ + + PYGM+ + L G KVI++ GRL Sbjct: 180 HSQSEWMNRLIIDGSQVPAEKVMQFPYGMETDSFIRAIQGSGKLN-KRGKKVILFTGRLV 238 Query: 240 YIKGVHVLIGALGILQHSRRDWVCAIAGIGSLTEELQEQARELGIQDRVFFTGKIDNIPA 299 +KG+H LI ALG L R+DW C I G GS+ EL++ R+ GI V F G ++N+ Sbjct: 239 TLKGLHSLIPALGKLSRERQDWECWILGEGSIRAELEQACRKFGIDGSVRFFGTVENVLP 298 Query: 300 ALTAADIYVQPSLQDTQPFSVTEAQLAGIAPIVAGTAGMPEMVQQGVTGFVVPPEDNXXX 359 L +ADI+V P LQDTQP SV EAQLAG+ IV+ AG+PEMVQ V G + P ++ Sbjct: 299 YLNSADIFVLPGLQDTQPHSVMEAQLAGLPVIVSDAAGLPEMVQHQVNGMIFPAGNSEVL 358 Query: 360 XXXXXXXXGDDELRMRTGKQARSWAAQNRSLDGMAAGTLMAYHKAVALQ 408 D+ R+ G A WA S D + L +++A+AL+ Sbjct: 359 FMQLRSLLQHDKKRLMMGVSALHWAKAKWSYDSLVTNILSMFNRAIALK 407 >B1DB52.1 B1DB52_9BACL Glycosyl transferase group 1 Length = 454 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 143/473 (30%), Positives = 236/473 (49%), Gaps = 34/473 (7%) Query: 1 MKILLVTYWGLTNMGGIWTYMKQLADKLSEQGHEVTLMGSRAEDHTLYLLDQGISFDKKV 60 MKIL+ TYW + ++GG+W Y++ L L + GHEV ++ ++++ Y+++ G +KK Sbjct: 1 MKILIATYWLIPHVGGVWVYIQDLKASLEKLGHEVDILARHPDENSYYIVNTGRRVEKK- 59 Query: 61 LYNSLLPQ-----FDTSRFPHLYLEHGILSFELGRYVFEGGAAVLGLEKYDVIHAQDPIS 115 L+ L+ + + + P ++ I+ E+ + A+ LGL YD+IHAQD IS Sbjct: 60 LFRPLIEKEIKAVYASQPIP---IDSWIVEQEIEFCSYALAASYLGLRGYDIIHAQDVIS 116 Query: 116 AYAIRRIMKVRKPLVASFHGALAYESYFEYKGIEPELTRIDYEKRAIWRYFRRLEGLGVR 175 + A+ +I R PL+ + HG LA + + +G P +IW+Y E G Sbjct: 117 SRALWQIKPDRIPLINTIHGCLATDFWVSLEGRTP--------SDSIWKYACAREYYGAT 168 Query: 176 SSDLILVSSNWIGQLVNREGAGRAGIHILPYGMDVKQYDAKAAMPAPLKFGDGLKVIMYA 235 SSDL +V +NW+ + + + ++PYGM+++ + + + I+ Sbjct: 169 SSDLAVVPTNWLHRTLGSYLVPGDHMEVVPYGMNIELFLERTKERNSFRLPKDNCNILCP 228 Query: 236 GRLEYIKGVHVLIGALGILQHSRRDWVCAIAGIGSLTEELQEQARELGIQDRVFFTGKID 295 RL+ +KG L+ AL +L+ SR DW C G G+L EL+ +A ELG+ V F G + Sbjct: 229 ARLDKVKGHSSLLDALHLLKQSRNDWRCLFVGDGTLRAELEAKALELGLSPYVVFAGSRN 288 Query: 296 NIPAALTAADIYVQPSLQDTQPFSVTEAQLAGIAPIVAGTAGMPEMVQQGVTGFVVPPED 355 ++PA + ADI V PSL D QP++V EAQLA +V+ G+PEMVQ G TG + D Sbjct: 289 DVPALMRQADIIVLPSLNDNQPYAVMEAQLASRPILVSDAGGIPEMVQHGQTGLMARAGD 348 Query: 356 NXXXXXXXXXXXGDDELRMRTGKQARSWAAQNRSLDGMAAGTLMAYHKAVALQKGRRGNI 415 + + LR R K SW + SL MA Y + Sbjct: 349 SGELSRCLQLLIENKPLRNRLAKNGHSWGLKQWSLPAMAERIEELYETL----------L 398 Query: 416 SDKGWRKSAVSSRLPDAFHPADVLELMRPGDPLALALREGLPQNYSIPDAQMV 468 +++ RK++ + P A H + + R A + +P+++S+ D +V Sbjct: 399 NNRHTRKASHPPKHP-AHHGSKICTYFRN------AYQMDIPKSFSVVDDHIV 444 >B1DB51.1 B1DB51_9BACL Glycosyl transferase group 1 Length = 406 Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust. Identities = 131/423 (30%), Positives = 208/423 (49%), Gaps = 33/423 (7%) Query: 1 MKILLVTYWGLTNMGGIWTYMKQLADKLSEQGHEVTLMGSRAEDHTLYLLDQGISFDKKV 60 MKI LV+YW + GG+ TY L L + GHEV ++ +++D+G + DK + Sbjct: 1 MKIALVSYWCIPYSGGVSTYTLALRKGLEDLGHEVDIISHNETGMKYHIVDKGKTIDKPL 60 Query: 61 L-----------YNSLLPQFDTSRFPHLYLEHGILSFELGRYVFEGGAAVLGLEKYDVIH 109 + YN LP FD + E R F + L+ YD+IH Sbjct: 61 VSAAVKRQIGTRYNKKLPSFDA----------WLADMESERIAFRQALSHFRLDDYDLIH 110 Query: 110 AQDPISAYAIRRIMKVRKPLVASFHGALAYESYFEYKGIEPELTRIDYEKRAI-WRYFRR 168 AQD ISA + PL+ + HG LA E + Y+G+ KR++ W + + Sbjct: 111 AQDVISATGAYEVKPHNIPLLLTLHGDLAAE--WRYQGV--------VSKRSLSWEWAKA 160 Query: 169 LEGLGVRSSDLILVSSNWIGQLVN-REGAGRAGIHILPYGMDVKQYDAKAAMPAPLKFGD 227 L+ G ++D I+ S W+ + + + G + ++PYG D ++ ++A+ P + Sbjct: 161 LDHYGRLAADQIIFPSGWLKRQYDVKPGRTNSSASVIPYGFDTMKFLHQSALYTPAFNKN 220 Query: 228 GLKVIMYAGRLEYIKGVHVLIGALGILQHSRRDWVCAIAGIGSLTEELQEQARELGIQDR 287 GLK+I+ RL+ +KG VL+ AL L+ R DW+C +AG G + +L++ +LG+ + Sbjct: 221 GLKLILCPARLDPVKGHQVLLQALSKLKEIRSDWICWLAGDGPMRSQLEQSVSQLGLGQQ 280 Query: 288 VFFTGKIDNIPAALTAADIYVQPSLQDTQPFSVTEAQLAGIAPIVAGTAGMPEMVQQGVT 347 V F G +N+ L AD+ V PS+ D PF V EAQ+AG I + T G+PEM+ G T Sbjct: 281 VSFLGHQNNMALLLQEADLIVLPSIHDNLPFVVMEAQVAGKPIIASDTGGIPEMIDNGKT 340 Query: 348 GFVVPPEDNXXXXXXXXXXXGDDELRMRTGKQARSWAAQNRSLDGMAAGTLMAYHKAVAL 407 G + P D++ R + QAR +N SL M T++ Y K +A Sbjct: 341 GVLFPNGKANLLCRGLNQLLSDEDQRKKLANQARYQGLRNWSLRTMINRTILLYEKTIAS 400 Query: 408 QKG 410 ++ Sbjct: 401 KRA 403 >Q2B0U2.1 Q2B0U2_9BACI Putative uncharacterized protein Length = 370 Score = 201 bits (512), Expect = 9e-50, Method: Compositional matrix adjust. Identities = 121/334 (36%), Positives = 167/334 (50%), Gaps = 2/334 (0%) Query: 74 FPHLYLEHGILSFELGRYVFEGGAAVLGLEKYDVIHAQDPISAYAIRRIMKVRKPLVASF 133 +P + I E+ RY A GLE YDVI+AQD +SA I RI + P+V S Sbjct: 32 YPDYNPDSFIFQTEVYRYSLYNAARYYGLEDYDVIYAQDVMSAGVIGRIKPSKVPMVMSA 91 Query: 134 HGALAYESYFEYKGIEPELTRIDYEKRAIWRYFRRLEGLGVRSSDLILVSSNWIGQL-VN 192 HG L E F K P + +K ++ +F+ LE LG D+I S W+ +L VN Sbjct: 92 HGYLLGEILFYLKSKFPNASDETLQKTEVYNFFQSLEKLGYYYCDMIHSQSQWMRELIVN 151 Query: 193 REGAGRAGIHILPYGMDVKQYDAKAAMPAPLKFGDGLKVIMYAGRLEYIKGVHVLIGALG 252 + + PYG+D L G G K+I++ GRL +KGV+ LI ALG Sbjct: 152 GSQVPEEKVVLFPYGVDTSSILETFGTSEKLDTG-GKKIIIFTGRLVTLKGVNTLISALG 210 Query: 253 ILQHSRRDWVCAIAGIGSLTEELQEQARELGIQDRVFFTGKIDNIPAALTAADIYVQPSL 312 +L R+DW C I G G L++Q LGI V F G + N+ L +ADI+V P L Sbjct: 211 MLVKERQDWECWILGDGEEKTNLEQQCSNLGITSSVKFFGNVKNVFPYLKSADIFVLPGL 270 Query: 313 QDTQPFSVTEAQLAGIAPIVAGTAGMPEMVQQGVTGFVVPPEDNXXXXXXXXXXXGDDEL 372 QDTQP SV EAQLAG+ IV+ G+PEMVQ + GF+ + D + Sbjct: 271 QDTQPHSVMEAQLAGLPVIVSDATGLPEMVQHQINGFIFRAHNIEALKIQLHFLLDDAKK 330 Query: 373 RMRTGKQARSWAAQNRSLDGMAAGTLMAYHKAVA 406 R G+Q+ WA + MA L + +A++ Sbjct: 331 RREFGEQSIRWALNKWDYNLMAENVLTMFTQAIS 364 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,809,177,805 Number of extensions: 118682200 Number of successful extensions: 272661 Number of sequences better than 1.0e-05: 2425 Number of HSP's gapped: 273266 Number of HSP's successfully gapped: 2427 Length of query: 471 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 332 Effective length of database: 1,751,175,118 Effective search space: 581390139176 Effective search space used: 581390139176 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)