BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0368.0034.p (907 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KL18.1 B3KL18_9BACI Valyl-tRNA synthetase 1497 0.0 B1DDS2.1 B1DDS2_9BACL Valyl-tRNA synthetase 1464 0.0 C0ZAJ2.1 C0ZAJ2_BREBN Valyl-tRNA synthetase EC=6.1.1.9 1262 0.0 C5D5K0.1 C5D5K0_9BACI Valyl-tRNA synthetase 1250 0.0 Q65GK8.1 SYV_BACLD Valyl-tRNA synthetase EC=6.1.1.9 1245 0.0 >B3KL18.1 B3KL18_9BACI Valyl-tRNA synthetase Length = 889 Score = 1497 bits (3876), Expect = 0.0, Method: Compositional matrix adjust. Identities = 706/881 (80%), Positives = 780/881 (88%) Query: 27 QNDMPTTYDPKAAEQKWYAYWMEHGFFEAGKRPEAEPYSIVIPPPNVTGMLHIGHALDFT 86 Q +MPTTYDPKAAEQKWY YW E GFFEAGKRP+AEPY+IVIPPPNVTGMLHIGHALDFT Sbjct: 9 QLEMPTTYDPKAAEQKWYPYWKEGGFFEAGKRPDAEPYTIVIPPPNVTGMLHIGHALDFT 68 Query: 87 LQDILIRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLRQQGISRHDLGREKFLEQVWAWK 146 LQDILIR KRMQG+D LWLPG+DHAGIATQTKVEQKLR++G++R+DLGREKFLE+VW WK Sbjct: 69 LQDILIRVKRMQGYDALWLPGSDHAGIATQTKVEQKLREEGVTRYDLGREKFLEKVWEWK 128 Query: 147 DQYAETIHEQWAKMGLSLDYSRERFTFDEGMAAAVRKVFVELYQKGLIYRGKRIINWDPA 206 D YA TI +QW+K+GLSLDYSRERFT DEG++ AVR+VFV+LY KGLIYRGKRIINWDPA Sbjct: 129 DLYANTIRDQWSKIGLSLDYSRERFTLDEGLSEAVREVFVKLYDKGLIYRGKRIINWDPA 188 Query: 207 ARTALSDIEVEYKEVNGHLYHLRYPLKDGSGFLTVATTRPETMLGDTAVAVHPEDERYRN 266 ARTALSDIEVEYKEVNGHLYHL+YPLKDGSG +TVATTRPETMLGDTAVAVHPEDERY++ Sbjct: 189 ARTALSDIEVEYKEVNGHLYHLQYPLKDGSGSITVATTRPETMLGDTAVAVHPEDERYKD 248 Query: 267 LIGKTLILPIIGREIPVIADEYVEKDFGSGAVKITPAHDPNDFEVGLRHNLPQINVMDES 326 +IGKTL+LPI+GREIPVIADEYVEKDFGSGAVKITPAHDPNDFE+GLRH+LPQI VMDES Sbjct: 249 MIGKTLVLPIVGREIPVIADEYVEKDFGSGAVKITPAHDPNDFEMGLRHDLPQITVMDES 308 Query: 327 GTMNEEAGPYQGQDRSECRKNIIADLQEQGVLVSIEDHVHQVGHSERSGAVVEPYLSTQW 386 GTMNE AG YQG DR+ECRK I++D++E GVL+ IEDHVHQVGHSERSGAVVEPYLSTQW Sbjct: 309 GTMNEFAGKYQGLDRAECRKQIVSDMKESGVLLRIEDHVHQVGHSERSGAVVEPYLSTQW 368 Query: 387 FVKMQPLAEKAIAAQKDGSGVNFVPERFEKTYMNWIENIRDWCISRQLWWGHRIPAWYSE 446 FVKMQPLAE A+ AQK G GVNFVP+RFE+TY++W+EN+RDWCISRQLWWGHRIPAWYSE Sbjct: 369 FVKMQPLAEAAVDAQKSGKGVNFVPDRFERTYLHWMENVRDWCISRQLWWGHRIPAWYSE 428 Query: 447 STGEVFVADSEEEARRISGLDDLRQDEDVLDTWFSSNLWPFATLGWPDENSSDYQRYYPN 506 STGEV VA +EEEAR G DDLRQDEDVLDTWFSS LWPF+T+GWPD +S D++RYYP Sbjct: 429 STGEVVVAMNEEEARAKLGKDDLRQDEDVLDTWFSSALWPFSTMGWPDLDSEDFKRYYPT 488 Query: 507 NVLVTGYDIIYFWVARMIFSALEFTGKKPFSDVLIHGLVRDAEGRKMSKSLGNGIDPLDV 566 +VLVTGYDII FWV+RMIF LEFTG+ PF D LIHGLVRD+EGRKMSKSLGNGIDPL+V Sbjct: 489 SVLVTGYDIIPFWVSRMIFQGLEFTGQMPFKDTLIHGLVRDSEGRKMSKSLGNGIDPLEV 548 Query: 567 IEQYGADAMRYMISTGITAGQDLRFRIEKVEQARNFANKIWNASRFALMNLEGVSFADID 626 IEQYGADAMRYMISTG T GQDLRFR E+VEQARNFANKIWNASRFALMNLEG + ADID Sbjct: 549 IEQYGADAMRYMISTGSTPGQDLRFRWERVEQARNFANKIWNASRFALMNLEGFTAADID 608 Query: 627 ITGELSTADRWILHRLNETSRDITRLIDAYEYGETGRLLYNFIWDDLCDWYIEFSKLTLY 686 I+GEL TADRWILHRLNETSRDITRLIDAYE+GETGRLLYNFIWDDLCDWYIEF+KL+LY Sbjct: 609 ISGELGTADRWILHRLNETSRDITRLIDAYEFGETGRLLYNFIWDDLCDWYIEFAKLSLY 668 Query: 687 GEDAAAKAKTQSVLAYVLDRTLRLIHPFMPFITEEIWQHLPHEGDTITLAEWPKYEAALE 746 GED AAK KTQSVLAYVLDRT+RLIHPFMPFI+EEIWQHLPHEG+T+ LA WP Y+ A E Sbjct: 669 GEDQAAKKKTQSVLAYVLDRTMRLIHPFMPFISEEIWQHLPHEGETVMLASWPTYDEAFE 728 Query: 747 QPQAVAEMNLLMDXXXXXXXXXXXXXXPMSKKVELIIKAASDETLNIIAKNDNYIGRFCN 806 +AV EMNLLMD PMSKKVEL +K S II +N +YI RFCN Sbjct: 729 NTEAVTEMNLLMDVIRAVRNIRAEVNVPMSKKVELQLKPVSGHIAGIIDRNSDYIRRFCN 788 Query: 807 TSSFEAGLEPNTPDKVMSAVITGAELLLPLAGLIDIEQEIIRLEKEVQTLNSEVERVEKK 866 TS +E+ L PDK M+AV+TG E+ LPLAGLIDI QEI RLEKE+Q LNSEVERVEKK Sbjct: 789 TSEYESSLALEAPDKAMTAVVTGVEMYLPLAGLIDIAQEITRLEKEIQHLNSEVERVEKK 848 Query: 867 LGNQGFVAKAPAKVIEEERAKQADYSAKREKVLARIAELRG 907 L N GFV+KAP KVIEEERAK ADYS KR KV+ARI ELRG Sbjct: 849 LNNPGFVSKAPEKVIEEERAKLADYSDKRSKVIARIEELRG 889 >B1DDS2.1 B1DDS2_9BACL Valyl-tRNA synthetase Length = 883 Score = 1464 bits (3789), Expect = 0.0, Method: Compositional matrix adjust. Identities = 688/882 (78%), Positives = 773/882 (87%), Gaps = 1/882 (0%) Query: 25 SKQNDMPTTYDPKAAEQKWYAYWMEHGFFEAGKRPEAEPYSIVIPPPNVTGMLHIGHALD 84 S + MPTTYDPKAAEQKWY +W + FF+AG+RP+A+P++IVIPPPNVTGMLHIGHALD Sbjct: 2 SDKTTMPTTYDPKAAEQKWYDFWQQGQFFKAGQRPDAKPFTIVIPPPNVTGMLHIGHALD 61 Query: 85 FTLQDILIRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLRQQGISRHDLGREKFLEQVWA 144 FTLQDI+IRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLR+QG+SR+DLGREKFLEQVW Sbjct: 62 FTLQDIIIRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLREQGLSRYDLGREKFLEQVWD 121 Query: 145 WKDQYAETIHEQWAKMGLSLDYSRERFTFDEGMAAAVRKVFVELYQKGLIYRGKRIINWD 204 WK+ YA TI EQW KMGLSLDYSRERFT DEG++ AVR+VFV L++KGLIYRGK+IINWD Sbjct: 122 WKELYAGTIREQWGKMGLSLDYSRERFTLDEGLSKAVREVFVRLHEKGLIYRGKKIINWD 181 Query: 205 PAARTALSDIEVEYKEVNGHLYHLRYPLKDGSGFLTVATTRPETMLGDTAVAVHPEDERY 264 PAARTALSDIEVEYKE+NGHLYHL+YPLKDGSG +TVATTRPETMLGDTAVAVHPEDERY Sbjct: 182 PAARTALSDIEVEYKELNGHLYHLQYPLKDGSGHITVATTRPETMLGDTAVAVHPEDERY 241 Query: 265 RNLIGKTLILPIIGREIPVIADEYVEKDFGSGAVKITPAHDPNDFEVGLRHNLPQINVMD 324 ++LIG+ ++LP++GREIP+IADEYVEKDFGSGAVKITPAHDPNDFEVGLRH+LPQI VMD Sbjct: 242 KHLIGQMIVLPVVGREIPIIADEYVEKDFGSGAVKITPAHDPNDFEVGLRHDLPQIIVMD 301 Query: 325 ESGTMNEEAGPYQGQDRSECRKNIIADLQEQGVLVSIEDHVHQVGHSERSGAVVEPYLST 384 E+GTMNE AGPYQG DR++CRK ++ DLQEQGV + IEDHVHQVGHSERSGAVVEPYLST Sbjct: 302 ETGTMNEHAGPYQGLDRADCRKQLVKDLQEQGVCIRIEDHVHQVGHSERSGAVVEPYLST 361 Query: 385 QWFVKMQPLAEKAIAAQKDGSGVNFVPERFEKTYMNWIENIRDWCISRQLWWGHRIPAWY 444 QWFV M+PLAE+AI AQK G+GVNFVP+RFEK Y+NWIEN+RDWCISRQLWWGHRIPAWY Sbjct: 362 QWFVAMKPLAERAIEAQKSGNGVNFVPDRFEKIYLNWIENVRDWCISRQLWWGHRIPAWY 421 Query: 445 SESTGEVFVADSEEEARRISGLDDLRQDEDVLDTWFSSNLWPFATLGWPDENSSDYQRYY 504 ES GE+ VA + A G LRQDEDVLDTWFSS LWPF+TLGWP+E + D++RYY Sbjct: 422 CESCGEMHVAREDVTACAACGSASLRQDEDVLDTWFSSGLWPFSTLGWPEE-TEDFKRYY 480 Query: 505 PNNVLVTGYDIIYFWVARMIFSALEFTGKKPFSDVLIHGLVRDAEGRKMSKSLGNGIDPL 564 P +VLVTGYDI+YFWVARMIF+ALEFT + PF DVL+HGLVRDAEGRKMSKSLGNG+DPL Sbjct: 481 PTDVLVTGYDIVYFWVARMIFTALEFTDQIPFKDVLMHGLVRDAEGRKMSKSLGNGVDPL 540 Query: 565 DVIEQYGADAMRYMISTGITAGQDLRFRIEKVEQARNFANKIWNASRFALMNLEGVSFAD 624 DVIE YGADAMRYMISTG T GQDLRFRIEKVEQARNFANKIWNASRFALMNLEG + +D Sbjct: 541 DVIENYGADAMRYMISTGSTPGQDLRFRIEKVEQARNFANKIWNASRFALMNLEGFTSSD 600 Query: 625 IDITGELSTADRWILHRLNETSRDITRLIDAYEYGETGRLLYNFIWDDLCDWYIEFSKLT 684 IDI L TA+RWILHRLNET R+ TRLID+YE+GETGR+LYNFIWDDLCDWYIEF+KL Sbjct: 601 IDIKSNLGTAERWILHRLNETVREATRLIDSYEFGETGRILYNFIWDDLCDWYIEFAKLN 660 Query: 685 LYGEDAAAKAKTQSVLAYVLDRTLRLIHPFMPFITEEIWQHLPHEGDTITLAEWPKYEAA 744 LYG D AK TQSVLAYVLDRT RLIHPFMP+I+EEIWQHLPHEG++ITLA WP YE A Sbjct: 661 LYGTDEQAKRATQSVLAYVLDRTQRLIHPFMPYISEEIWQHLPHEGESITLAAWPVYEEA 720 Query: 745 LEQPQAVAEMNLLMDXXXXXXXXXXXXXXPMSKKVELIIKAASDETLNIIAKNDNYIGRF 804 LE P+AV EM LLMD PMSKKVEL+IK + + I+++N+ +I RF Sbjct: 721 LEAPEAVKEMELLMDIIRAVRNVRAEVNVPMSKKVELMIKPSGEAEAAIVSRNEEFIRRF 780 Query: 805 CNTSSFEAGLEPNTPDKVMSAVITGAELLLPLAGLIDIEQEIIRLEKEVQTLNSEVERVE 864 C TSSFE GL PDK M+A++TGAEL LPLAGLIDI QEI RLEKE+ TLNSEVERVE Sbjct: 781 CGTSSFETGLGLAAPDKAMTAIVTGAELYLPLAGLIDISQEIARLEKELATLNSEVERVE 840 Query: 865 KKLGNQGFVAKAPAKVIEEERAKQADYSAKREKVLARIAELR 906 KKLGN+GFVAKAPAKVIEEERAK ADY+ KR+KVLARI ELR Sbjct: 841 KKLGNEGFVAKAPAKVIEEERAKMADYAGKRDKVLARIEELR 882 >C0ZAJ2.1 C0ZAJ2_BREBN Valyl-tRNA synthetase EC=6.1.1.9 Length = 890 Score = 1262 bits (3266), Expect = 0.0, Method: Compositional matrix adjust. Identities = 593/878 (67%), Positives = 700/878 (79%), Gaps = 1/878 (0%) Query: 30 MPTTYDPKAAEQKWYAYWMEHGFFEAGKRPEAEPYSIVIPPPNVTGMLHIGHALDFTLQD 89 +P YDPKAAE KWY YW+E FF+A + P P++IVIPPPNVTG LH+GHALD TLQD Sbjct: 13 LPKNYDPKAAENKWYPYWIEKQFFKAERDPNKRPFTIVIPPPNVTGKLHLGHALDTTLQD 72 Query: 90 ILIRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLRQQGISRHDLGREKFLEQVWAWKDQY 149 I+ RTKRMQG+ L+LPG DHAGIATQ +VE LR++GISRHDLGREKF+E+VW WK Y Sbjct: 73 IITRTKRMQGYSALFLPGMDHAGIATQARVEATLREEGISRHDLGREKFVEKVWEWKHIY 132 Query: 150 AETIHEQWAKMGLSLDYSRERFTFDEGMAAAVRKVFVELYQKGLIYRGKRIINWDPAART 209 A I EQW K+GL+LDYSRERFT DEG++ AVR+VFV LY+KGLIYRG RIINWDPAART Sbjct: 133 ASHIREQWEKLGLALDYSRERFTMDEGLSQAVREVFVRLYEKGLIYRGNRIINWDPAART 192 Query: 210 ALSDIEVEYKEVNGHLYHLRYPLKDGSGFLTVATTRPETMLGDTAVAVHPEDERYRNLIG 269 ALSDIEV YKEV G L+H+RYPL DG+G++ VATTRPETMLGDTAVAVHPEDERY+++IG Sbjct: 193 ALSDIEVIYKEVKGALHHMRYPLADGTGYIEVATTRPETMLGDTAVAVHPEDERYKDMIG 252 Query: 270 KTLILPIIGREIPVIADEYVEKDFGSGAVKITPAHDPNDFEVGLRHNLPQINVMDESGTM 329 KT+ILPI+GREIP++AD+YV+ +FGSGAVKITPAHDPNDFE+GLRH LPQI VMDE+GTM Sbjct: 253 KTVILPIVGREIPIVADDYVDPEFGSGAVKITPAHDPNDFELGLRHQLPQIVVMDETGTM 312 Query: 330 NEEAGPYQGQDRSECRKNIIADLQEQGVLVSIEDHVHQVGHSERSGAVVEPYLSTQWFVK 389 NE AG Y+G DR CRK II DL EQGV+ +E+H+HQVGHSERS AVVEPYLSTQWFVK Sbjct: 313 NELAGIYKGLDRFACRKQIIKDLTEQGVMFKVEEHIHQVGHSERSDAVVEPYLSTQWFVK 372 Query: 390 MQPLAEKAIAAQKDGSGVNFVPERFEKTYMNWIENIRDWCISRQLWWGHRIPAWYSESTG 449 MQPLA++A+A V FVPERF+ Y+ WIENIRDWCISRQLWWGHRIPAWY Sbjct: 373 MQPLADEALANANSPESVKFVPERFKTNYLRWIENIRDWCISRQLWWGHRIPAWYCGDCN 432 Query: 450 EVFVADSEEEARRISGLDDLRQDEDVLDTWFSSNLWPFATLGWPDENSSDYQRYYPNNVL 509 E V+ ++ L QD DVLDTWFSS LWPF+TLGWP+E S D + +YP NVL Sbjct: 433 ETIVSRADVTECPSCHSHKLEQDNDVLDTWFSSGLWPFSTLGWPEE-SEDMKYFYPTNVL 491 Query: 510 VTGYDIIYFWVARMIFSALEFTGKKPFSDVLIHGLVRDAEGRKMSKSLGNGIDPLDVIEQ 569 VTGYDII+FWVARM+FS LEFTGK PF VLIHG++RD+EGRKMSKSLGNG+DP++VIE+ Sbjct: 492 VTGYDIIFFWVARMMFSGLEFTGKSPFESVLIHGIIRDSEGRKMSKSLGNGVDPMEVIEK 551 Query: 570 YGADAMRYMISTGITAGQDLRFRIEKVEQARNFANKIWNASRFALMNLEGVSFADIDITG 629 YGADA+RY ++TG + G D RF EKVE RNFANKIWNASRFALMNL + +ID++G Sbjct: 552 YGADALRYTLATGNSPGNDQRFYWEKVEANRNFANKIWNASRFALMNLTDFKYEEIDLSG 611 Query: 630 ELSTADRWILHRLNETSRDITRLIDAYEYGETGRLLYNFIWDDLCDWYIEFSKLTLYGED 689 ELST D+WIL RL T D+TRL DA+E+GE+GR+LYNFIWDDLCDWYIE +KL LYG D Sbjct: 612 ELSTPDKWILSRLQATIADVTRLSDAFEFGESGRVLYNFIWDDLCDWYIEMAKLPLYGTD 671 Query: 690 AAAKAKTQSVLAYVLDRTLRLIHPFMPFITEEIWQHLPHEGDTITLAEWPKYEAALEQPQ 749 AAK TQSVL VLD+TL+L+HPFMPFITEEIWQ LPH+G++IT+A WP + Sbjct: 672 EAAKKTTQSVLVTVLDQTLKLLHPFMPFITEEIWQALPHQGESITVAPWPTVNEQWMFAE 731 Query: 750 AVAEMNLLMDXXXXXXXXXXXXXXPMSKKVELIIKAASDETLNIIAKNDNYIGRFCNTSS 809 A +EMN LMD PMSKK+EL+IK + + + + + Y+ RFCN Sbjct: 732 AESEMNQLMDIIRSVRNIRAEVNVPMSKKIELLIKPSDALSAERLTRGEQYLTRFCNPER 791 Query: 810 FEAGLEPNTPDKVMSAVITGAELLLPLAGLIDIEQEIIRLEKEVQTLNSEVERVEKKLGN 869 E L+ TPDK MS+VITGAEL LPLAGLIDIEQE+ RLEKEV TLN EVER+EKKL N Sbjct: 792 LEISLDLATPDKAMSSVITGAELFLPLAGLIDIEQELKRLEKEVATLNGEVERIEKKLNN 851 Query: 870 QGFVAKAPAKVIEEERAKQADYSAKREKVLARIAELRG 907 GF+AKAP KV+EEE+AK ADY KR+KV+AR+AEL+G Sbjct: 852 AGFMAKAPEKVVEEEKAKMADYMDKRDKVIARLAELKG 889 >C5D5K0.1 C5D5K0_9BACI Valyl-tRNA synthetase Length = 880 Score = 1250 bits (3235), Expect = 0.0, Method: Compositional matrix adjust. Identities = 586/877 (66%), Positives = 706/877 (80%), Gaps = 5/877 (0%) Query: 30 MPTTYDPKAAEQKWYAYWMEHGFFEAGKRPEAEPYSIVIPPPNVTGMLHIGHALDFTLQD 89 M T YD KA E Y +W++ FFEA P+ +P++IVIPPPNVTG LH+GHA D TLQD Sbjct: 8 MSTKYDHKAVEANRYQWWLDGKFFEATGDPDKKPFTIVIPPPNVTGKLHLGHAWDTTLQD 67 Query: 90 ILIRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLRQQGISRHDLGREKFLEQVWAWKDQY 149 I+ R KRMQG+D LWLPG DHAGIATQ KVE+KLR+QG+SR+DLGREKFLE+ W WK++Y Sbjct: 68 IITRMKRMQGYDVLWLPGMDHAGIATQAKVEEKLRKQGLSRYDLGREKFLEETWKWKEEY 127 Query: 150 AETIHEQWAKMGLSLDYSRERFTFDEGMAAAVRKVFVELYQKGLIYRGKRIINWDPAART 209 A I +QWAK+GL LDY+RERFT DEG++ AVR+VFV LY+KGLIYRG+ IINWDP +T Sbjct: 128 ASHIRQQWAKLGLGLDYTRERFTLDEGLSKAVREVFVSLYRKGLIYRGEYIINWDPVTKT 187 Query: 210 ALSDIEVEYKEVNGHLYHLRYPLKDGSGFLTVATTRPETMLGDTAVAVHPEDERYRNLIG 269 ALSDIEV YKEV G LYH+RYPL DGSG++ VATTRPETMLGDTAVAVHP+DERY++LIG Sbjct: 188 ALSDIEVIYKEVKGALYHMRYPLADGSGYIEVATTRPETMLGDTAVAVHPDDERYKHLIG 247 Query: 270 KTLILPIIGREIPVIADEYVEKDFGSGAVKITPAHDPNDFEVGLRHNLPQINVMDESGTM 329 KT+ILPI+GREIP+IAD+YV+ +FGSGAVKITPAHDPNDFE+G RHNLP+I VM+E GTM Sbjct: 248 KTVILPIVGREIPIIADKYVDMEFGSGAVKITPAHDPNDFEIGNRHNLPRILVMNEDGTM 307 Query: 330 NEEAGPYQGQDRSECRKNIIADLQEQGVLVSIEDHVHQVGHSERSGAVVEPYLSTQWFVK 389 NE A YQG DR ECRK I+ DLQEQGVL IE+HVH VGHSERSGAVVEPYLSTQWFVK Sbjct: 308 NENAMQYQGLDRFECRKQIVKDLQEQGVLFKIEEHVHSVGHSERSGAVVEPYLSTQWFVK 367 Query: 390 MQPLAEKAIAAQKDGSGVNFVPERFEKTYMNWIENIRDWCISRQLWWGHRIPAWYSESTG 449 M+PLAE AI QK V+FVPERFEKTY++W+ENIRDWCISRQLWWGHRIPAWY + TG Sbjct: 368 MKPLAEAAIQLQKTEGKVHFVPERFEKTYLHWLENIRDWCISRQLWWGHRIPAWYHKETG 427 Query: 450 EVFVADSEEEARRISGLDDLRQDEDVLDTWFSSNLWPFATLGWPDENSSDYQRYYPNNVL 509 E++V D E A +++ QD DVLDTWFSS LWPF+T+GWPD + DY+RYYP +VL Sbjct: 428 EIYV-DHEPPA----DIENWEQDPDVLDTWFSSALWPFSTMGWPDTEAPDYKRYYPTDVL 482 Query: 510 VTGYDIIYFWVARMIFSALEFTGKKPFSDVLIHGLVRDAEGRKMSKSLGNGIDPLDVIEQ 569 VTGYDII+FWV+RMIF LEFTG++PF DVLIHGLVRDA+GRKMSKSLGNG+DP+DVI+Q Sbjct: 483 VTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDAQGRKMSKSLGNGVDPMDVIDQ 542 Query: 570 YGADAMRYMISTGITAGQDLRFRIEKVEQARNFANKIWNASRFALMNLEGVSFADIDITG 629 YGAD++R+ ++TG + GQDLRF EKVE NFANKIWNASRFALMN+ G+++ +D++G Sbjct: 543 YGADSLRFFLATGSSPGQDLRFSTEKVEATWNFANKIWNASRFALMNMGGMTYDQLDLSG 602 Query: 630 ELSTADRWILHRLNETSRDITRLIDAYEYGETGRLLYNFIWDDLCDWYIEFSKLTLYGED 689 E + AD WIL RLNET +T+L + YE+GE GR+LYNFIWDDLCDWYIE +KL LYG+D Sbjct: 603 EKTVADHWILTRLNETIETVTKLAEKYEFGEVGRVLYNFIWDDLCDWYIEMAKLPLYGDD 662 Query: 690 AAAKAKTQSVLAYVLDRTLRLIHPFMPFITEEIWQHLPHEGDTITLAEWPKYEAALEQPQ 749 AAK T+SVLAYVLD T+RL+HPFMPFITEEIWQHLPHEG++IT+A+WP+ L + Sbjct: 663 EAAKKTTRSVLAYVLDNTMRLLHPFMPFITEEIWQHLPHEGESITVAKWPEVRPGLSNHE 722 Query: 750 AVAEMNLLMDXXXXXXXXXXXXXXPMSKKVELIIKAASDETLNIIAKNDNYIGRFCNTSS 809 A EM LL+D P+SK ++L IKA + + KN Y+ RFCN S Sbjct: 723 AAEEMRLLVDIIRAVRNIRAEVNTPLSKPIKLHIKAKDEHIQATLEKNRVYLERFCNPSE 782 Query: 810 FEAGLEPNTPDKVMSAVITGAELLLPLAGLIDIEQEIIRLEKEVQTLNSEVERVEKKLGN 869 + +K M+AV+TGAEL+LPL GLI+IE+EI RLEKE++ LN EVERV+KKL N Sbjct: 783 LLIATDIPAAEKAMTAVVTGAELILPLEGLINIEEEIKRLEKELEKLNKEVERVQKKLSN 842 Query: 870 QGFVAKAPAKVIEEERAKQADYSAKREKVLARIAELR 906 +GF+ KAPA V+EEER K+ DY KRE V AR+AEL+ Sbjct: 843 EGFLTKAPAHVVEEERKKEKDYLEKREAVRARLAELK 879 >Q65GK8.1 SYV_BACLD Valyl-tRNA synthetase EC=6.1.1.9 Length = 880 Score = 1245 bits (3221), Expect = 0.0, Method: Compositional matrix adjust. Identities = 576/878 (65%), Positives = 710/878 (80%), Gaps = 7/878 (0%) Query: 30 MPTTYDPKAAEQKWYAYWMEHGFFEAGKRPEAEPYSIVIPPPNVTGMLHIGHALDFTLQD 89 MPT YDP A E+ Y YW+ FFEA PE EPY++VIPPPNVTG LH+GHA D TLQD Sbjct: 8 MPTKYDPSAVEKDRYDYWVNGKFFEAKNDPEKEPYTVVIPPPNVTGKLHLGHAWDSTLQD 67 Query: 90 ILIRTKRMQGFDTLWLPGTDHAGIATQTKVEQKLRQQGISRHDLGREKFLEQVWAWKDQY 149 I+ R KRMQG+D LWLPG DHAGIATQ KVE KLR++G +R+DLGREKFLE+ W WK++Y Sbjct: 68 IVTRMKRMQGYDVLWLPGMDHAGIATQAKVEAKLREEGKTRYDLGREKFLEETWNWKEEY 127 Query: 150 AETIHEQWAKMGLSLDYSRERFTFDEGMAAAVRKVFVELYQKGLIYRGKRIINWDPAART 209 A+ I QWAK+GL LDYSRERFT DEG++ AVR+VFV+LY+KGLIYRG+ IINWDPA +T Sbjct: 128 ADFIRSQWAKLGLGLDYSRERFTLDEGLSKAVREVFVKLYEKGLIYRGEYIINWDPATKT 187 Query: 210 ALSDIEVEYKEVNGHLYHLRYPLKDGSGFLTVATTRPETMLGDTAVAVHPEDERYRNLIG 269 ALSDIEV YK+V G YH+RYPLKDGSG + +ATTRPETMLGDTAVAVHPEDERY++LIG Sbjct: 188 ALSDIEVIYKDVQGAFYHMRYPLKDGSGSIEIATTRPETMLGDTAVAVHPEDERYKHLIG 247 Query: 270 KTLILPIIGREIPVIADEYVEKDFGSGAVKITPAHDPNDFEVGLRHNLPQINVMDESGTM 329 KT+ILPI GREIP++ D+YV+ +FGSGAVKITPAHDPNDFE+G RHNL +I VM+E GTM Sbjct: 248 KTVILPITGREIPIVGDDYVDMEFGSGAVKITPAHDPNDFEIGNRHNLERILVMNEDGTM 307 Query: 330 NEEAGPYQGQDRSECRKNIIADLQEQGVLVSIEDHVHQVGHSERSGAVVEPYLSTQWFVK 389 N+ A Y+G DR ECRK I+ DLQE+GVL IE+H H VGHSERSGAVVEPYLSTQWFV+ Sbjct: 308 NDNALQYKGMDRFECRKQIVKDLQEEGVLFKIEEHTHSVGHSERSGAVVEPYLSTQWFVQ 367 Query: 390 MQPLAEKAIAAQKDGSGVNFVPERFEKTYMNWIENIRDWCISRQLWWGHRIPAWYSESTG 449 MQPLA+ AI QK VNFVP+RFEKTY++W+ENIRDWCISRQLWWGHRIPAWY + TG Sbjct: 368 MQPLADAAIELQKSEGKVNFVPDRFEKTYLHWMENIRDWCISRQLWWGHRIPAWYHKETG 427 Query: 450 EVFVA-DSEEEARRISGLDDLRQDEDVLDTWFSSNLWPFATLGWPDENSSDYQRYYPNNV 508 E++V ++ E+A ++ QD+DVLDTWFSS LWPF+T+GWPD + D++RYYP NV Sbjct: 428 EIYVGVEAPEDA------ENWEQDKDVLDTWFSSALWPFSTMGWPDIDEEDFKRYYPTNV 481 Query: 509 LVTGYDIIYFWVARMIFSALEFTGKKPFSDVLIHGLVRDAEGRKMSKSLGNGIDPLDVIE 568 LVTGYDII+FWV+RMIF +EFTG++PF DVLIHGL+RD +GRKMSKSLGNG+DP+DVI+ Sbjct: 482 LVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDDQGRKMSKSLGNGVDPMDVID 541 Query: 569 QYGADAMRYMISTGITAGQDLRFRIEKVEQARNFANKIWNASRFALMNLEGVSFADIDIT 628 +YGAD++RY ++TG + GQDLRF EKVE NFANKIWNASRFALMN++G+++ ++D++ Sbjct: 542 KYGADSLRYFLATGSSPGQDLRFSFEKVESTWNFANKIWNASRFALMNMDGMTYEELDLS 601 Query: 629 GELSTADRWILHRLNETSRDITRLIDAYEYGETGRLLYNFIWDDLCDWYIEFSKLTLYGE 688 GE S AD+WIL RLNET +T+L D YE+GE GR LYNFIWDD CDWYIE +KL LYGE Sbjct: 602 GEKSVADKWILTRLNETIETVTQLADKYEFGEVGRHLYNFIWDDFCDWYIEMAKLPLYGE 661 Query: 689 DAAAKAKTQSVLAYVLDRTLRLIHPFMPFITEEIWQHLPHEGDTITLAEWPKYEAALEQP 748 D AAK T+S+LAYVLD+T+RL+HPFMPF+TEEIWQHLPHEG++IT+A+WP+ Sbjct: 662 DEAAKKTTRSILAYVLDQTMRLLHPFMPFLTEEIWQHLPHEGESITVAKWPEAVKEYTDT 721 Query: 749 QAVAEMNLLMDXXXXXXXXXXXXXXPMSKKVELIIKAASDETLNIIAKNDNYIGRFCNTS 808 +A A+M LL++ P+SK++EL IK ++ E + +N +Y+ RF N S Sbjct: 722 EAAADMKLLVEVIRAVRNIRSEVNTPLSKQIELYIKTSTPEIAERLEENRSYVERFTNPS 781 Query: 809 SFEAGLEPNTPDKVMSAVITGAELLLPLAGLIDIEQEIIRLEKEVQTLNSEVERVEKKLG 868 + G + DK M+AV++GAEL+LPL GLI+I++EI RL+KE+ L EVERV+KKL Sbjct: 782 LLQIGTDIQAVDKAMTAVVSGAELILPLEGLINIDEEISRLQKELDKLTKEVERVQKKLS 841 Query: 869 NQGFVAKAPAKVIEEERAKQADYSAKREKVLARIAELR 906 N+GF+ KAPA VIEEERAK+ADY+AKRE V RIAEL+ Sbjct: 842 NEGFMKKAPAHVIEEERAKEADYTAKREAVEKRIAELK 879 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.135 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 5,520,513,279 Number of extensions: 240239215 Number of successful extensions: 675490 Number of sequences better than 1.0e-05: 6273 Number of HSP's gapped: 647333 Number of HSP's successfully gapped: 9821 Length of query: 907 Length of database: 3,060,696,203 Length adjustment: 145 Effective length of query: 762 Effective length of database: 1,694,649,028 Effective search space: 1291322559336 Effective search space used: 1291322559336 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 136 (57.0 bits)