BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0368.0030.p (407 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q02CD3.1 Q02CD3_SOLUE Glycosyl transferase, group 1 87 4e-15 Q97EQ1.1 Q97EQ1_CLOAB Glycosyltransferase 80 3e-13 Q39U45.1 Q39U45_GEOMG Glycosyl transferase, group 1 75 9e-12 Q9PEZ3.1 Q9PEZ3_XYLFA Putative uncharacterized protein 73 6e-11 A5USY9.1 A5USY9_ROSS1 Glycosyl transferase, group 1 72 9e-11 >Q02CD3.1 Q02CD3_SOLUE Glycosyl transferase, group 1 Length = 400 Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 75/267 (28%), Positives = 119/267 (44%), Gaps = 16/267 (5%) Query: 140 LPEAVIITDARRT--WSRAAEKGGTVRRRIKYPYHKLNEARTRRDERRLMNKTGLLLTAN 197 LP AV T W R E G RR Y KL R ERR+ ++G ++ + Sbjct: 128 LPHAVFFQHNVETVIWRRHVEHAGDFLRRA---YFKLQADRMYHYERRVSRESGHIVAVS 184 Query: 198 ERDALSFKALSFADAGKVHVVPPFVDLQQYQHDEPVCKENGIM-----LHWDIHNVQGRN 252 ++DA + L D +V +P V+++ + EP + + W + NV G Sbjct: 185 KKDADEMRRL--FDVTRVSEIPTGVNIEYFLPPEPRLGTVADLVFVGSMDW-LPNVDG-- 239 Query: 253 AALLFHAKVYPLIRAEVPEVQCYMVGSAADSSIQALSKTDSSVKIIEDTSLAGEYIRRAK 312 + F +V PLIR + PE +VG + L+ D +++ Y+ + Sbjct: 240 -IVNFVREVLPLIRRQRPETTLAVVGRTPPPKLLQLAVGDPKIQVTGTVPDIRPYLWGSA 298 Query: 313 AVIACLDEGCGGQEKILEAWALRTPVVTSPRGAEALICENGRDILLAGTAMEIAEQTVML 372 I L G G + KI EA A + PVV++ GAE L RDI +A + E A Q + L Sbjct: 299 VSIVPLRIGGGTRLKIYEAMAAKIPVVSTTIGAEGLTVNPPRDIRIADSPQEFAAQCLDL 358 Query: 373 LQTPELASLISDRAYRTLLNHYEVKNV 399 L PE + I+ A+ + ++ ++V Sbjct: 359 LSCPETRTRIATSAWEMVNANFSWEHV 385 >Q97EQ1.1 Q97EQ1_CLOAB Glycosyltransferase Length = 420 Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 65/214 (30%), Positives = 102/214 (47%), Gaps = 12/214 (5%) Query: 192 LLLTANERDALSFKALSFADAGKVHVVPPFVDLQQYQHDEPVCKENGIMLHWDIHNVQGR 251 +L++ ERD L+ K K V V+ + + KEN I Sbjct: 204 VLVSDRERDRLNAKL----KEQKAVTVSTGVNCDYFSKVDVKVKENLISFLGVYSAPHNE 259 Query: 252 NAALLFHAKVYPLIRAEVPEVQCYMVGSAADSSIQALSKTDSSVKI---IEDTSLAGEYI 308 +A L F+ ++P+I+ E + +VG A SI+ L K D +V I +ED YI Sbjct: 260 DAVLYFYNSIFPIIKKENHNIVLRLVGGNATDSIKKL-KNDKAVDIEGRVEDVR---RYI 315 Query: 309 RRAKAVIACLDEGCGGQEKILEAWALRTPVVTSPRGAEALICENGRDILLAGTAMEIAEQ 368 + ++ IA L G G + KILEA A+ PVVT+ GAE + EN +D+++ + AE Sbjct: 316 KESRVFIAPLRFGSGIKTKILEAMAMGVPVVTTSIGAEGMDAENYKDMIIEDDEEKFAEA 375 Query: 369 TVMLLQTPELASLISDRAYRTLLNHYEVKNVKAK 402 + L+ EL + I + N+Y+ N+K K Sbjct: 376 VLRLISDKELYNKICSNGKEFVRNNYDW-NIKMK 408 >Q39U45.1 Q39U45_GEOMG Glycosyl transferase, group 1 Length = 403 Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust. Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 10/216 (4%) Query: 167 IKYPYHKLNEARTRRDERRLMNKTGLLLTANE--RDALSFKALSFADAGKVHVVPPFVDL 224 +K + KL R R E+ ++N+ + +E RD L ++ + VVP + Sbjct: 159 LKRAFLKLQWQRLCRFEKEMVNRFDRCIAVSELDRDVLVGMGITIP----ISVVPNGTNT 214 Query: 225 QQYQHDEPVCKENGIML--HWDIHNVQGRNAALLFHAKVYPLIRAEVPEVQCYMVGSAAD 282 + ++ EN ++ H D+H R+A L F ++ PLIR P+ VG+A Sbjct: 215 EFFKPIGRPPVENSVLWLGHMDVHT--NRDAVLYFWREICPLIRQRQPDATMIFVGTAPP 272 Query: 283 SSIQALSKTDSSVKIIEDTSLAGEYIRRAKAVIACLDEGCGGQEKILEAWALRTPVVTSP 342 I + +D V++ Y+ A+ V+ + G G + KIL+A + +V++ Sbjct: 273 REIAEAAASDPRVRVTGFVDDIRTYVDEARVVVVPIRIGSGTRLKILDAMGMGKAIVSTS 332 Query: 343 RGAEALICENGRDILLAGTAMEIAEQTVMLLQTPEL 378 G E L E+GR+IL+A T A++ + +L +L Sbjct: 333 VGCEGLAVEHGRNILVADTPEAFADEVMSVLANRDL 368 >Q9PEZ3.1 Q9PEZ3_XYLFA Putative uncharacterized protein Length = 443 Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust. Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 8/229 (3%) Query: 177 ARTRRDERRLMNKTGLLLTAN--ERDALSFKALSFADAGKVHVVPPFVDLQQYQHDEPVC 234 A TRR E ++ L+ + ERD L+ +V VVP D+ + P Sbjct: 215 AITRRHELHAISCADLVWVVSPVERDYLA----RLLPQARVEVVPNMHDM--VETIPPFV 268 Query: 235 KENGIMLHWDIHNVQGRNAALLFHAKVYPLIRAEVPEVQCYMVGSAADSSIQALSKTDSS 294 +G + + +A ++++P IR +P+ Q ++VG+ ++Q+ Sbjct: 269 SRHGFLFVGGSRHPPNVDAVRWLLSEIFPRIRERLPDAQLHLVGAGLAEAMQSQQMICPG 328 Query: 295 VKIIEDTSLAGEYIRRAKAVIACLDEGCGGQEKILEAWALRTPVVTSPRGAEALICENGR 354 V + + +A L G G + KI EA A PVVT+P GAE + +G Sbjct: 329 VSFHGHVPEMAPLLHACRVSLAPLRFGAGVKGKISEALAYGLPVVTTPEGAEGMYLRSGM 388 Query: 355 DILLAGTAMEIAEQTVMLLQTPELASLISDRAYRTLLNHYEVKNVKAKV 403 D L++G A ++A Q V + E+ +SD + + H+ + + +A + Sbjct: 389 DALISGDAEDLARQAVCAHEDLEVWQRLSDNGQQIIKQHFSLHSTRAAL 437 >A5USY9.1 A5USY9_ROSS1 Glycosyl transferase, group 1 Length = 436 Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust. Identities = 78/257 (30%), Positives = 120/257 (46%), Gaps = 29/257 (11%) Query: 174 LNEARTRRDERRLMNKTGLLLTANERDALSFKALS--------------FAD-----AGK 214 L+ ARTR E R + ++ ++ DA + + L FA+ A Sbjct: 155 LDLARTRIYEARYTHHFEQVIVSSPEDAWALRTLHRHLCPYRAPDRPEWFANPSDQAAES 214 Query: 215 VHVVPPFVDLQQYQHDEPVCKENGIMLHWDIHNVQGRNAALLFHAK-VYPLIRAEVPEVQ 273 + VVP VDL+ Y +P+ +E ++ + AA L+ + + PL+ A PE + Sbjct: 215 ISVVPNGVDLE-YFAPQPIARERATIVFSGKMSYHANEAAALYLVREIMPLVWASRPETR 273 Query: 274 CYMVGSAADSSIQALSKTDSSVKI---IEDTSLAGEYIRRAKAVIACLDEGCGGQEKILE 330 + GSA S+++L+ TD V + +ED A I A +A L G G Q K+LE Sbjct: 274 VVIAGSAPPPSVRSLA-TDRRVTVTGYLEDLRPA---IAGATVAVAPLRYGVGIQNKVLE 329 Query: 331 AWALRTPVVTSPRGAEALICENGRDILLAGTAMEIAEQTVMLLQTPELASLISDRAYRTL 390 A AL TPVV + + A AL RD+LLA E A+ + L+ P+ A+ I A R Sbjct: 330 AMALATPVVAARQAARALHAVEERDLLLAEQPYEYADAILNLIDDPQRAATIGA-AGRRY 388 Query: 391 LNHYEVKNVKAKVLSLV 407 + Y + A+ L V Sbjct: 389 VERYHTWDAAAERLERV 405 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.135 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,181,737,910 Number of extensions: 83540061 Number of successful extensions: 207711 Number of sequences better than 1.0e-05: 114 Number of HSP's gapped: 207718 Number of HSP's successfully gapped: 114 Length of query: 407 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 269 Effective length of database: 1,760,596,133 Effective search space: 473600359777 Effective search space used: 473600359777 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 132 (55.5 bits)