BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0368.0003.p (293 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KL47.1 B3KL47_9BACI Branched-chain amino acid aminotransferase... 536 e-151 A4IRI2.1 A4IRI2_GEOTN Branched-chain amino acid aminotransferase 399 e-109 B4BQE8.1 B4BQE8_9BACI Branched-chain amino acid aminotransferase... 399 e-109 C5D5M4.1 C5D5M4_9BACI Branched-chain amino acid aminotransferase... 394 e-108 Q5KWI9.1 Q5KWI9_GEOKA Branched-chain amino acid aminotransferase... 394 e-108 >B3KL47.1 B3KL47_9BACI Branched-chain amino acid aminotransferase EC=2.6.1.21 Length = 294 Score = 536 bits (1382), Expect = e-151, Method: Compositional matrix adjust. Identities = 256/293 (87%), Positives = 276/293 (94%) Query: 1 MAEQWIYLDGQHVTKENAKVSVFDHGFLYGDGIFEGIRIYNGNIFKCKEHLDRLYDSAKS 60 M+EQWIYLDG++VTKENAKVSVFDHGFLYGDGIFEGIRIYNGNIFKCKEHLDRLYDSAKS Sbjct: 1 MSEQWIYLDGEYVTKENAKVSVFDHGFLYGDGIFEGIRIYNGNIFKCKEHLDRLYDSAKS 60 Query: 61 IMLDIPLTYDEMLEAMAETIRLNDMRNGYIRLIVSRGPGNLGLDPRRCPKASVIIIVEQL 120 I L IPL Y+E+LEAMAETIR NDMRNGYIR++VSRG GNLGLDPRRCPK +V+IIVEQL Sbjct: 61 IDLVIPLAYEELLEAMAETIRRNDMRNGYIRIVVSRGAGNLGLDPRRCPKPTVLIIVEQL 120 Query: 121 AIYPEQAYLNGLRAVSVSQRRNIPDALNPKIKSLNYLNNILVKIQSNLAEADEAIMMNAQ 180 AIY E+AYLNGL+AVSV+QRRNIPDALNPKIKSLNYLNNILVKIQSN A ADEAIMMNAQ Sbjct: 121 AIYSEEAYLNGLKAVSVAQRRNIPDALNPKIKSLNYLNNILVKIQSNFAGADEAIMMNAQ 180 Query: 181 GYVTEGSGDNIFIVKRGIVYTPPCYLGALEGITRLAIIELCGKLGLTLKEEPFTMHDVYI 240 GYVTEGSGDNIFIVK G+V TPPCYLGALEGITR AII+LC KLG+ LKEEPF+MHDVYI Sbjct: 181 GYVTEGSGDNIFIVKNGVVTTPPCYLGALEGITRQAIIDLCEKLGIKLKEEPFSMHDVYI 240 Query: 241 ADEVFFTGTAAEVIAAREIDGRVIGAGHAGPITLQLLEEFRNVVDKDGYKVWE 293 ADEVFFTGTAAEVIAAREIDGR+IG G AGP+TLQLLEEFR +VD+DGYKVWE Sbjct: 241 ADEVFFTGTAAEVIAAREIDGRIIGKGQAGPVTLQLLEEFRKIVDQDGYKVWE 293 >A4IRI2.1 A4IRI2_GEOTN Branched-chain amino acid aminotransferase Length = 299 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/292 (64%), Positives = 237/292 (81%) Query: 1 MAEQWIYLDGQHVTKENAKVSVFDHGFLYGDGIFEGIRIYNGNIFKCKEHLDRLYDSAKS 60 M EQWI+L+G+ VTKENAK+SV+DHGFLYGDG+FEGIR+Y+GN+F+ +EH+DRLY+SAKS Sbjct: 1 MGEQWIFLNGEFVTKENAKISVYDHGFLYGDGVFEGIRVYSGNVFRLEEHIDRLYNSAKS 60 Query: 61 IMLDIPLTYDEMLEAMAETIRLNDMRNGYIRLIVSRGPGNLGLDPRRCPKASVIIIVEQL 120 IML+IP T DEM+ + ET+R N ++ YIRL+VSRG G+LGLDP +C V+IIVE L Sbjct: 61 IMLNIPYTKDEMINHVLETVRRNGYQDAYIRLVVSRGVGDLGLDPYKCKSPQVVIIVEPL 120 Query: 121 AIYPEQAYLNGLRAVSVSQRRNIPDALNPKIKSLNYLNNILVKIQSNLAEADEAIMMNAQ 180 A++P+ Y G+ V+V+ RRN D L+PK+KSLNYLNN+LVKI+++LA EA+++N Q Sbjct: 121 ALFPKHLYETGIEVVTVATRRNRSDVLSPKVKSLNYLNNVLVKIEAHLANVSEALILNDQ 180 Query: 181 GYVTEGSGDNIFIVKRGIVYTPPCYLGALEGITRLAIIELCGKLGLTLKEEPFTMHDVYI 240 GYV EGSGDNIFIVK G+VYTPP Y+GALEGITR AIIE+ +LG T+KEEPFT HDVY+ Sbjct: 181 GYVAEGSGDNIFIVKNGVVYTPPGYVGALEGITRQAIIEIAEELGYTVKEEPFTRHDVYV 240 Query: 241 ADEVFFTGTAAEVIAAREIDGRVIGAGHAGPITLQLLEEFRNVVDKDGYKVW 292 ADEVF TGTAAEVI+ ++DGR IG G GP T +LLEEFR V +G KV+ Sbjct: 241 ADEVFLTGTAAEVISVIKVDGRTIGDGTPGPHTKRLLEEFRRRVIAEGVKVY 292 >B4BQE8.1 B4BQE8_9BACI Branched-chain amino acid aminotransferase EC=2.6.1.21 Length = 299 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 187/292 (64%), Positives = 237/292 (81%) Query: 1 MAEQWIYLDGQHVTKENAKVSVFDHGFLYGDGIFEGIRIYNGNIFKCKEHLDRLYDSAKS 60 M EQWI+L+G+ VTKENAK+SV+DHGFLYGDG+FEGIR+Y+GN+F+ +EH+DRLY+SAKS Sbjct: 1 MGEQWIFLNGEFVTKENAKISVYDHGFLYGDGVFEGIRVYSGNVFRLEEHIDRLYNSAKS 60 Query: 61 IMLDIPLTYDEMLEAMAETIRLNDMRNGYIRLIVSRGPGNLGLDPRRCPKASVIIIVEQL 120 IML+IP T DEM+ + ET+R N ++ YIRL+VSRG G+LGLDP +C V+IIVE L Sbjct: 61 IMLNIPYTKDEMINHVLETVRRNGYQDAYIRLVVSRGVGDLGLDPYKCKSPQVVIIVEPL 120 Query: 121 AIYPEQAYLNGLRAVSVSQRRNIPDALNPKIKSLNYLNNILVKIQSNLAEADEAIMMNAQ 180 A++P+ Y G+ V+V+ RRN D L+PK+KSLNYLNN+LVKI+++LA EA+++N Q Sbjct: 121 ALFPKHLYETGIEVVTVATRRNRSDVLSPKVKSLNYLNNVLVKIEAHLANVSEALILNDQ 180 Query: 181 GYVTEGSGDNIFIVKRGIVYTPPCYLGALEGITRLAIIELCGKLGLTLKEEPFTMHDVYI 240 GYV EGSGDNIFIVK G+VYTPP Y+GALEGITR AIIE+ +LG T+KEEPFT HDVY+ Sbjct: 181 GYVAEGSGDNIFIVKNGVVYTPPGYVGALEGITRQAIIEIAEELGYTVKEEPFTRHDVYV 240 Query: 241 ADEVFFTGTAAEVIAAREIDGRVIGAGHAGPITLQLLEEFRNVVDKDGYKVW 292 ADEVF TGTAAEVI+ ++DGR IG G GP T +LLEEFR V +G KV+ Sbjct: 241 ADEVFLTGTAAEVISVIKVDGRTIGDGTPGPHTKRLLEEFRRRVIAEGVKVY 292 >C5D5M4.1 C5D5M4_9BACI Branched-chain amino acid aminotransferase EC=2.6.1.42 Length = 299 Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust. Identities = 184/293 (62%), Positives = 236/293 (80%) Query: 1 MAEQWIYLDGQHVTKENAKVSVFDHGFLYGDGIFEGIRIYNGNIFKCKEHLDRLYDSAKS 60 M+EQWI+L+G+ VTKENAK+SV+DHGFLYGDG+FEGIR+Y+GN+F+ KEH+DRLY+SAKS Sbjct: 1 MSEQWIFLNGEFVTKENAKISVYDHGFLYGDGVFEGIRVYSGNVFRLKEHIDRLYNSAKS 60 Query: 61 IMLDIPLTYDEMLEAMAETIRLNDMRNGYIRLIVSRGPGNLGLDPRRCPKASVIIIVEQL 120 I+L IP T +EM + ETIR N ++ YIRL+VSRG G+LGLDP +C K V+IIVE L Sbjct: 61 ILLTIPYTKEEMTNYVIETIRKNQYQDAYIRLVVSRGVGDLGLDPYKCKKPQVVIIVEPL 120 Query: 121 AIYPEQAYLNGLRAVSVSQRRNIPDALNPKIKSLNYLNNILVKIQSNLAEADEAIMMNAQ 180 A++P+ Y G+ V+V+ RRN D L+PK+KSLNYLNN+LVKI+++LA EA+++N Q Sbjct: 121 ALFPKHLYETGIEVVTVATRRNRSDVLSPKVKSLNYLNNVLVKIEAHLANVSEALILNDQ 180 Query: 181 GYVTEGSGDNIFIVKRGIVYTPPCYLGALEGITRLAIIELCGKLGLTLKEEPFTMHDVYI 240 GYV EGSGDN+FI+K ++YTPP Y+GALEGITR AIIE+ +LG +KEEPFT HDVY+ Sbjct: 181 GYVAEGSGDNVFIIKDEVIYTPPGYVGALEGITRQAIIEIAQELGYVVKEEPFTRHDVYV 240 Query: 241 ADEVFFTGTAAEVIAAREIDGRVIGAGHAGPITLQLLEEFRNVVDKDGYKVWE 293 ADEVF TGTAAEVIA ++DGRVIG G G T +LLEEFR V +G KV++ Sbjct: 241 ADEVFLTGTAAEVIAVVKVDGRVIGEGVPGKHTKRLLEEFRRRVVSEGVKVYQ 293 >Q5KWI9.1 Q5KWI9_GEOKA Branched-chain amino acid aminotransferase (Transaminase B) EC=2.6.1.42 Length = 299 Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust. Identities = 183/292 (62%), Positives = 236/292 (80%) Query: 1 MAEQWIYLDGQHVTKENAKVSVFDHGFLYGDGIFEGIRIYNGNIFKCKEHLDRLYDSAKS 60 M EQWI+L+G+ VTKENAK+SV+DHGFLYGDG+FEGIR+Y+GN+F+ +EH+DRLY+SAKS Sbjct: 1 MGEQWIFLNGEFVTKENAKISVYDHGFLYGDGVFEGIRVYSGNVFRLEEHIDRLYNSAKS 60 Query: 61 IMLDIPLTYDEMLEAMAETIRLNDMRNGYIRLIVSRGPGNLGLDPRRCPKASVIIIVEQL 120 I+LDIP T +EM+ + ETIR N ++ YIRL+VSRG G+LGLDP +C ++IIVE L Sbjct: 61 ILLDIPYTKEEMIGHVLETIRRNGYQDAYIRLVVSRGVGDLGLDPYKCKTPQIVIIVEPL 120 Query: 121 AIYPEQAYLNGLRAVSVSQRRNIPDALNPKIKSLNYLNNILVKIQSNLAEADEAIMMNAQ 180 A++P+ Y G+ V+V+ RRN D L+PK+KSLNYLNN+LVKI+++LA EA+++N Q Sbjct: 121 ALFPKHLYETGIEVVTVATRRNRSDVLSPKVKSLNYLNNVLVKIEAHLANVSEALILNDQ 180 Query: 181 GYVTEGSGDNIFIVKRGIVYTPPCYLGALEGITRLAIIELCGKLGLTLKEEPFTMHDVYI 240 GYV EGSGDN+FI+K G++YTPP Y+GALEGITR AIIE+ LG T+KEEPFT HDVY+ Sbjct: 181 GYVAEGSGDNVFIIKNGVIYTPPGYVGALEGITRQAIIEIAEDLGYTVKEEPFTRHDVYV 240 Query: 241 ADEVFFTGTAAEVIAAREIDGRVIGAGHAGPITLQLLEEFRNVVDKDGYKVW 292 ADEVF TGTAAEVI+ ++DGR IG G GP T +LLEEFR V +G KV+ Sbjct: 241 ADEVFLTGTAAEVISVIKVDGRTIGDGTPGPHTKRLLEEFRRRVVVEGVKVY 292 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.141 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,739,217,539 Number of extensions: 69601328 Number of successful extensions: 167907 Number of sequences better than 1.0e-05: 2486 Number of HSP's gapped: 164208 Number of HSP's successfully gapped: 2545 Length of query: 293 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 159 Effective length of database: 1,798,280,193 Effective search space: 285926550687 Effective search space used: 285926550687 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)