BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0359.0024.p (718 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2GY94.1 C2GY94_BIFLO Endo-beta-N-acetylglucosaminidase family p... 564 e-158 C4G1U0.1 C4G1U0_ABIDE Putative uncharacterized protein 437 e-120 Q6A6T2.1 Q6A6T2_PROAC Endo-beta-N-acetylglucosaminidase family p... 407 e-111 C4E9T2.1 C4E9T2_STRRS Endo-beta-N-acetylglucosaminidase D 251 2e-64 Q9KER4.1 Q9KER4_BACHD Endo-beta-N-acetylglucosaminidase 239 8e-61 >C2GY94.1 C2GY94_BIFLO Endo-beta-N-acetylglucosaminidase family protein Length = 1096 Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust. Identities = 309/704 (43%), Positives = 424/704 (60%), Gaps = 43/704 (6%) Query: 7 DTWPFKG--------DSAPGANQPNVHGYTSSHIANWSPQTDPDAELLRSRVPLQERIAP 58 DT P+ G + + GANQP HGYT I NW+P D D+E LRSRVPLQ RIA Sbjct: 15 DTMPWGGQYADTSHPEQSAGANQPYQHGYTGLDILNWNPDADKDSEYLRSRVPLQTRIAA 74 Query: 59 FAATQANPALSPQTRMMNVAGDYGNAFIENAPYTNKFAQYHFNFWQYIDYYSYWHGTATA 118 AATQ +P L T M N+AGDYGNAF E+ N F+QY FN+WQY DYY WHG TA Sbjct: 75 NAATQKDPNLPADTEMFNLAGDYGNAFFESFHDNNVFSQYLFNYWQYTDYYGTWHGQPTA 134 Query: 119 YTPPEYYDELAQKDWQQKWFEFGMLNIPNPTYTDAAHKNGVMSLAGIFFSNNDRGQQTYQ 178 P YDE AQ DW QKWFEFG LN+PN YT+ AHKNG S+A IF+S NDRG+QTY+ Sbjct: 135 NVPKSLYDEKAQSDWTQKWFEFGTLNLPNAAYTNVAHKNGAKSIATIFYSGNDRGEQTYK 194 Query: 179 QMIV-RDEQGNFPVAEKLIEMAQYFGFDGYFINQEEMSPNVAVADIPDYIAFMKALQKGG 237 ++ + G +PVA+KL+E+A+Y+GFDGYF+NQE +V AD+P Y FMK + G Sbjct: 195 DLLQGKRADGTYPVADKLVEIAKYYGFDGYFVNQES---SVNSADVPAYQDFMKQIIDQG 251 Query: 238 LYVQWYDSLNTQTGANTFARTLNDSNISMLVDKSTKEPVSNSFFFDYGAGNTQITGXXXX 297 +Y+QWYDS G ++ ND+N S V K +S+S F +Y + Sbjct: 252 IYIQWYDSATYPNGGVSYQNMFNDAN-SPWVQDPNKGKISDSIFLNYWFSGNML--QDSA 308 Query: 298 XXXXXXXXGTSYSLYDVGYAGLEAGRDRFKPV--NGXXXXXXXXXXXXPRLSLATLGADF 355 Y++ +AG+EAG+ +F + N P +SLA LG DF Sbjct: 309 DHAKSLGIDPKYAV----FAGIEAGQKKFGSIASNANYMNVNLDADGKPYVSLAALGTDF 364 Query: 356 VHAGLDEDMGLSYPVSHRSENDYQWMTHLREQLWWSGPNVNPKNTAKPAANTVSDVYADN 415 V L +D + YP YQ RE+ W+G + K T +SD Y D+ Sbjct: 365 VSHELGDDKKV-YP-------KYQNQVFDRERRLWTGSSTGEKGTTD-----ISDPYIDD 411 Query: 416 ----RYWPGISSVIAERSVIKDNNFYTNFNTGHGLSYYVNGAVSSNEEWSNMSLQDIPVT 471 W G +S IAERSVI F T+FNTGHGL + NG +SN++W N++LQDI T Sbjct: 412 GTSSDSWKGFASQIAERSVIGGPVFSTSFNTGHGLEWRDNGEQTSNQQWGNINLQDILPT 471 Query: 472 WQWWQETTGNRLTVDFDYGPGYNLSGTERYKYKQLGGFNGGSSLVVNGNLNAENFLRLYK 531 WQWW + + L DFDYG Y + R+ Y ++GG+ GG SLV++G L+++N +RLYK Sbjct: 472 WQWWIDADSDPLQADFDYGKKYEAA--PRFNYTKVGGYEGGDSLVLSGKLSSDNTVRLYK 529 Query: 532 TELSLKAGSKLSISYNKPSAANSSSMSVGIILADDPNTVVKVPVPDSGRKTSGWVTKELD 591 T+LS+ AGSK+ ++YNK + ++ S + +G+I ADD T+V V + D G ++GW T +D Sbjct: 530 TDLSVAAGSKVELTYNKLN-SDDSKLQLGLIFADDTKTIVPVDMADGG-ASNGWKTATVD 587 Query: 592 LSAYAGRTAAAFGLVFNPGQGVVNNYQMNIGQIRITDGTAVKPAAPAGLTIAKAFRDTNE 651 LS YAG+ A GL+ G ++NYQ+NIG+I +TDG A PAAP + +A+ D++E Sbjct: 588 LSQYAGKKIATLGLIVKAGANPIDNYQVNIGKITVTDGAAYTPAAPTNFQVERAYADSDE 647 Query: 652 MVVEWKLDPDYNKVKQYNVYVNDVYMGGKYDEVFYLKRLPAKSG 695 + V+W L DY+ K Y +Y+++ ++GG+YD+ Y+K LPAK+G Sbjct: 648 LTVKWDL-ADYSTAKNYLLYLDNTFLGGRYDDTLYVKHLPAKTG 690 >C4G1U0.1 C4G1U0_ABIDE Putative uncharacterized protein Length = 1645 Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust. Identities = 261/702 (37%), Positives = 382/702 (54%), Gaps = 53/702 (7%) Query: 3 AYAGDTWPFKGDSAPGANQPNVHGYTSSHIANWSPQTDPDAELLRSRVPLQERIAPFAAT 62 AYA DTWP + + QP+ GYT +I W +TDP ++L+R+RVPLQ+R F T Sbjct: 31 AYA-DTWPDIDSAKIKSAQPHFSGYTVRNIEAWDKETDPFSDLMRARVPLQKRNEAFTQT 89 Query: 63 QANPALSPQTRMMNVAGDYGNAFIENAPYTNKFAQYHFNFWQYIDYYSYWHGTATAYTPP 122 QANP+L+ +T +M + GDYGN+F + N + FNFWQY DY+ WHG AT P Sbjct: 90 QANPSLNDKTEVMLMQGDYGNSFFNSTIANNSYGNVAFNFWQYTDYFCPWHGAATVGVPE 149 Query: 123 EYYDELAQKDWQQKWFEFGMLNIPNPTYTDAAHKNGVMSLAGIFFSNNDRGQQTYQQMIV 182 YD + DW+ + FEFG++NIPN Y +AAHKNGV ++A ++F + R QT +M V Sbjct: 150 GLYDPVTS-DWRARGFEFGIVNIPNQAYINAAHKNGVKAIACVYFDPHFRPGQTINEMFV 208 Query: 183 RDEQGNFPVAEKLIEMAQYFGFDGYFINQEEMSPNVAVADIPDYIAFMKALQKGGLYVQW 242 +D G++ VA+KLI +A+ +G DGYF+N EE + FM L + GLY Q+ Sbjct: 209 KDTNGDYVVAKKLIALAKEYGIDGYFLNNEERYDE-------RFKDFMAYLSEKGLYTQF 261 Query: 243 YDSLNTQTGANTFARTLNDSNISMLVDKSTKEPVSNSFFFDYGAGNTQITGXXXXXXXXX 302 YD+ N++ N S L D + + +S F +YG N Sbjct: 262 YDT-------NSY---FNRSKSQWLKD-DNRAKIHDSVFVNYGWSNVN--------KFVE 302 Query: 303 XXXGTSYSLYDVGYAGLEAGRDRFKPVNGXXXXX-XXXXXXXPRLSLATLG-ADFVHAGL 360 Y + G+EA + ++ N P S+A +D G+ Sbjct: 303 HAKEIGVDPYKAVFLGIEANQGKYIANNNLVKNSYTSETDKNPLCSIALFTPSDMYQRGV 362 Query: 361 DE---DMGLS--YPVSHRSENDYQWMTHLREQLWWSGPNVNPKNT-AKPAANTVSDVYAD 414 D+ +GLS PV R E YQWM RE++++SG +PK+T + P V D Sbjct: 363 DDLEKKLGLSGKLPVHQRPE--YQWMIAERERMYFSGVTCDPKDTGSHPGYKREDVVVND 420 Query: 415 NRYWPGISSVIAERSVIKDNNFYTNFNTGHGLSYYVNGAVSSNEEWSNMSLQDIPVTWQW 474 YWPG++ AE SVI+ FYT+FN G G+ Y+V G ++E W+N++ QDI +WQW Sbjct: 421 ASYWPGVADFKAETSVIRGKKFYTDFNIGKGMQYFVKGKAVNDEAWTNLNDQDILPSWQW 480 Query: 475 WQETTGNRLTVDFDYGPGYNLSGTERYK----YKQLGGFNGGSSLVVNGNLNAENFLRLY 530 W E+ G++L DFD+G + TE K +KQ+G +NGGSSLVV G+L ++N L+L+ Sbjct: 481 WFESEGSKLKADFDFGEKEVRNDTEGNKRELPFKQIGAYNGGSSLVVYGDLKSKNNLKLF 540 Query: 531 KTELSLKAGSKLSISYNKPSAANSSSMSVGIILADDPNTVVKVPVPDSGRKTSGWVTKEL 590 KT L + +K + + K S +++ M +G++ D P V++ V + K+ + + ++ Sbjct: 541 KTALDVTESTKAKLIFRKTS-DDAAKMKLGLVFEDKPEETVELEVKSTETKSDEFKSAQV 599 Query: 591 DLSAYAGRTAAAFGLVFNPGQGVVNNYQMNIGQIRITDGTAVKPAAPAGLTIAKAFRDTN 650 DLSAY GR AA LVF+ G + YQMNIG I ++D T + AP I + + D Sbjct: 600 DLSAYKGRKIAAISLVFD---GNADTYQMNIGSISVSD-TETEITAPENFKIDRVY-DDK 654 Query: 651 EMVVEWKLDPDYNKVKQYNVYVNDV----YMGGKYDEVFYLK 688 +MV WKLD Y V +Y VY ++GG YDE Y+K Sbjct: 655 QMVFSWKLDR-YEDVDKYRVYAESEGKKHFLGGIYDEKLYVK 695 >Q6A6T2.1 Q6A6T2_PROAC Endo-beta-N-acetylglucosaminidase family protein Length = 1082 Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust. Identities = 261/714 (36%), Positives = 371/714 (51%), Gaps = 58/714 (8%) Query: 3 AYAGDTWPFKGDSAPGANQPNVHGYTSSHIANWSPQTDPDAELLRSRVPLQERIAPFAAT 62 A A D+ G A + QP GY I WSPQTDP A LR+ VPLQ RI +T Sbjct: 22 AVADDSVAPVGAHALASAQPRNAGYRLQDIRTWSPQTDPYARYLRAEVPLQPRIPHDPST 81 Query: 63 QANPALSPQTRMMNVAGDYGNAFIENAPYTNKFAQYHFNFWQYIDYYSYWHGTATAYTPP 122 QA+P L + ++M + GDYGN+F N + FA NFWQY DY+S WHG+ATA TP Sbjct: 82 QAHPELDAKAQVMLMQGDYGNSFFGNFRANDGFAHNVLNFWQYADYWSPWHGSATARTPQ 141 Query: 123 EYYDELAQKDWQQKWFEFGMLNIPNPTYTDAAHKNGVMSLAGIFFSNNDRGQQTYQQMIV 182 YD A DW+ + FEFG+++IPNP YT+AAH+NGV S+A I+F R T+++ Sbjct: 142 SLYDP-ATSDWRTRNFEFGVVDIPNPAYTNAAHRNGVKSIATIYFDPAFRPGLTFREAFD 200 Query: 183 RDEQGN-FPVAEKLIEMAQYFGFDGYFINQEEMSPNVAVADIPD--YIAFMKALQKGGLY 239 +D + +AEKL+EMA+YFG+DGYF+N+EE ++ D + FM L GLY Sbjct: 201 KDPTSRGYIIAEKLVEMAKYFGYDGYFLNEEE-------GNLQDSRFRPFMSCLTSKGLY 253 Query: 240 VQWYDSLNTQTGANTFARTLNDSNISMLVDKSTKEPVSNSFFFDYGAGNTQITGXXXXXX 299 QWY + T +++ A L+ I NS F +Y TQ Sbjct: 254 TQWYTN-TPGTWSSSKAGLLDHGRI------------MNSVFLNYNWSGTQ-------DR 293 Query: 300 XXXXXXGTSYSLYDVGYAGLEAGRDRF----KPVNGXXXXXXXXXXXXPRLSLATLG-AD 354 Y Y + G+EA + F + P+ S+A +D Sbjct: 294 SVEAAKAEGYDPYQSLFFGVEANQAGFNGKHRSATELPSIYESRRNHSPKASVALFTPSD 353 Query: 355 FVHAGLDEDM---GLSYPVSHRSENDYQWMTHLREQLWWSGPNVNPKNTAKPAANTVSDV 411 GL + + G V ++ YQWM RE++++SG NPK+T ++ +V Sbjct: 354 MYQRGLADAVKPKGADKDVPLFQQDPYQWMVAERERMYFSGVTSNPKDTGAHPGHSRPEV 413 Query: 412 -YADNRYWPGISSVIAERSVIKDNNFYTNFNTGHGLSYYVNGAVSSNEEWSNMSLQDIPV 470 AD+ W G + RSVI F+T+FNTGHG+ +Y G VS+ W++M Q I Sbjct: 414 GVADSSSWVGAADFTPARSVIGGRRFHTDFNTGHGMKWYSAGDVSAAASWTDMDAQSILP 473 Query: 471 TWQWWQETTGNRLTVDFDYGPGYNLSGTE----RYKYKQLGGFNGGSSLVVNGNLNAENF 526 +WQWW +T G R +VDFDYGP Y Q+G + GGSSLVV+G ++ Sbjct: 474 SWQWWIDTEGTRPSVDFDYGPSDRRKDVHGAPVSLPYHQVGAWRGGSSLVVHGTMSKTTT 533 Query: 527 LRLYKTELSLKAGSKLSISYNKPSAANSSSMSVGIILADDPNTVVKVPVPDSGRKTSGWV 586 LRL+KT L++ A + + I++ K S+ + +M ++ ADDP VV V VP SG K GW Sbjct: 534 LRLFKTRLAMTADTSMPITFRK-SSKDHGTMKAALVFADDPGRVVTVDVPGSGVK-GGWH 591 Query: 587 TKELDLSAYAGRTAAAFGLVFNPGQGVVNNYQMNIGQIRITDGTAVKPAAPAGLTIAKAF 646 T L L +AGRT GL F P +YQMN+G I + DG+ V PAAP+ + + + Sbjct: 592 TSTLRLGRFAGRTLTTLGLQFEPAP----DYQMNVGAISVRDGSGV-PAAPSKVHLDTVY 646 Query: 647 RDTNEMVVEWKLDPDYNKVKQYNVYV-----NDVYMGGKYDEVFYLKRLPAKSG 695 D + ++ W P ++ V Y V V++ Y ++ YLK +P K+G Sbjct: 647 -DDGQAILSWHAAP-FDDVAGYVVESMGPDGKIVHLASGYTDLAYLKAVPKKTG 698 >C4E9T2.1 C4E9T2_STRRS Endo-beta-N-acetylglucosaminidase D Length = 834 Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 203/692 (29%), Positives = 305/692 (44%), Gaps = 119/692 (17%) Query: 20 NQPNVHGYTSSHIANWSPQTDPDAELLRSRVPLQERIAPFAATQANPALSPQTRMMNVAG 79 +QP + + I NW P TDPDA RSRVPL+ R + +PAL G Sbjct: 63 DQPYASYWHPNTILNWDPATDPDARFNRSRVPLRPRAS-------DPALKANPNARAGEG 115 Query: 80 DYGNAFIENAPYTNKFAQ-------YHFNFWQYIDYYSYWHGTATAYTPPEYYDELAQKD 132 + + AP + +Q Y F +WQYID +W G+A Sbjct: 116 KIAS-LVSFAPTSGNPSQGSLDPNYYAFTYWQYIDTLVFWGGSAGE-------------- 160 Query: 133 WQQKWFEFGMLNIPNPTYTDAAHKNGVMSLAGIFFSNNDRGQQT-YQQMIVRDEQGNFPV 191 G++ PN T DAAH+NGV +FF G Q + + VR N+PV Sbjct: 161 --------GLILAPNATVIDAAHRNGVKVYGTVFFPPTAYGGQIQWVRDFVRKSGPNYPV 212 Query: 192 AEKLIEMAQYFGFDGYFINQEEMSPNVAVA-DIPDYIAFMKALQKGGLYVQWYDSLNTQT 250 A+KL+++AQ++GFDG+FINQE + A+A +I + + +A K WYD++ T+ Sbjct: 213 ADKLVQVAQHYGFDGWFINQETAGGDAALATEIRSLMKYARA--KSQAEFMWYDAM-TEN 269 Query: 251 GANTFARTLNDSNISMLVDKSTKEPVSNSFFFDYGAGNTQITGXXXXXXXXXXXXGTSYS 310 G+ ++ L +N + L D + VS+S F D+G G + Y+ Sbjct: 270 GSVSWQDALTTANDAFLSDPAR---VSDSMFLDFGWGAGNLRSSRDLARSLSRDEHELYA 326 Query: 311 LYDVGYAGLEAGR--DRFKPVNGXXXXXXXXXXXXPRLSLATLGADFVHAGLDEDMGLSY 368 D G G D P + + +LG G Sbjct: 327 GIDTEANGYNTGVSWDAVFPTG--------------QPHVTSLGIYRPEWTWKSSSG--- 369 Query: 369 PVSHRSENDYQWMTHLREQLWWSGPNVNPKNTAKPAANTVSDVYADNRYWPGISSVIAER 428 P R+ + W+ G N +P NTA ++ W G++ IAE Sbjct: 370 PADFRTRDSRYWV----------GANADPSNTATSSS------------WKGLAHHIAES 407 Query: 429 SVIKDNNFYTNFNTGHGLSYYVNGAVSSNEEWSNMSLQDIPVTWQWWQETTGNRLTVDFD 488 + + F T FNTGHG Y V G W+N+S+QD+P T+QW +++G RLT D Sbjct: 408 TAVTAKPFVTGFNTGHGDFYNVGGTRVRTGGWNNLSVQDVPPTYQWVVDSSGTRLTPSID 467 Query: 489 YGPGYNLSGTERYKYKQLGGFNGGSSLVVNGNLNAENFLRLYKTELSLKAGSKLSISYNK 548 YG Y GGSSL + GNL+A N +RLY+ +L + AG+KLS+ Sbjct: 468 YGDAY----------------EGGSSLRLTGNLDAANTVRLYQAKLPVTAGTKLSVVVKT 511 Query: 549 PSAANSSSMSVGIILADDPNTVVKVPVPDSGRKT-SGWVTKELDLSAYAGRTAAAFGLVF 607 P AA + + + D P T D G + +GW K LDLSA+AG+T A GL Sbjct: 512 P-AAGPTRLKAAVAFTDAPGTFTTF---DLGSTSGTGWERKTLDLSAHAGKTIAQLGLR- 566 Query: 608 NPGQGVVNNYQMNIGQIRITDGTAVKPAAPAGLTIAKAFR---DTNEMVVEW-KLDPDYN 663 +G +Y + +GQ+ + DG PAAP+GL + A + + W Sbjct: 567 --AEGSAASYDIRVGQLAVYDGAVDAPAAPSGLQVLGATDVSPSRKSLRLAWTAAGSGSG 624 Query: 664 KVKQYNVYVND-----VYMGGKYDEVFYLKRL 690 +V Y+VY + Y+G ++ +++ +L Sbjct: 625 QVHHYDVYRRNADGSRTYLGATPNDAYFVPQL 656 >Q9KER4.1 Q9KER4_BACHD Endo-beta-N-acetylglucosaminidase Length = 878 Score = 239 bits (610), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 199/701 (28%), Positives = 311/701 (44%), Gaps = 132/701 (18%) Query: 19 ANQPNVHGYTSSHIANWSPQTDPDAELLRSRVPLQERIAPF---------AATQANPALS 69 A+QP + + +WSP+TDPDA RS +PL+ER + A A AL+ Sbjct: 26 ASQPESSYWYPETLLDWSPETDPDARFNRSSIPLREREVLYTVNDTQQTDAKLVALSALN 85 Query: 70 PQTRMMNVAGDYGNAFIENAPYTNKFAQYHFNFWQYIDYYSYWHGTATAYTPPEYYDELA 129 P T + G GN F N F FWQY+D YW G+A Sbjct: 86 PNTSGVPSQG--GNEFFANT----------FGFWQYVDLMVYWAGSAGE----------- 122 Query: 130 QKDWQQKWFEFGMLNIPNPTYTDAAHKNGVMSLAGIFFSNNDRGQQT--YQQMIVRDEQG 187 G++ P+ DAAH+NGV L +FF G Q +M+VR E G Sbjct: 123 -----------GIITPPSGDVIDAAHRNGVPILGNVFFPPKVYGGQEEWVDKMLVRGEDG 171 Query: 188 NFPVAEKLIEMAQYFGFDGYFINQEEM--SPNVAVADIPDYIAFMKALQKGGLYVQWYDS 245 +FP A+KL+E+A+Y+GFDG+FINQE +P A D+ +++ +++ + G+++ WYDS Sbjct: 172 SFPAADKLLEVAEYYGFDGWFINQETEGGTPETA-KDMQEFLLYLQENKPEGMHIMWYDS 230 Query: 246 LNTQTGANTFARTLNDSNISMLVDKSTKEPVSNSFFFDYGAGNTQITGXXXXXXXXXXXX 305 + G + L D N ++ V++S F ++ N Sbjct: 231 M-ISNGDIRWQNYLTDENAMFF--QAGNRKVADSMFLNFWWWN------HSQERSKQKAA 281 Query: 306 GTSYSLYDVGYAGLEAGRDRFKPVNGXXX----XXXXXXXXXPRLSLATLGADFVHAGLD 361 S YD+ YAG++ NG P SL D+ D Sbjct: 282 SLGRSPYDL-YAGIDV------EANGTNTYVNWQQVFPEGGEPHTSLGIYRPDWAFKSTD 334 Query: 362 EDMGLSYPVSHRSENDYQWMTHLREQLWWSGPNVNPKNTAKPAANTVSDVYADNRYWPGI 421 + D+ + REQL+W GP+ NP + A W G+ Sbjct: 335 ------------TMRDF----YDREQLFWVGPSGNPAKVDEHAE------------WKGM 366 Query: 422 SSVIAERSVIKDNNFYTNFNTGHGLSYYVNGAVSSNEEWSNMSLQDIPVTWQWWQETTGN 481 ++ E++VI + F T+FNTG G + +NG S+ W+N SLQD+ TW+W E+ G Sbjct: 367 ATYFPEKTVINELPFVTHFNTGSGQFFAINGKTKSDVSWNNRSLQDLLPTWRWMAESGGT 426 Query: 482 RLTVDFDYGPGYNLSGTERYKYKQLGGFNGGSSLVVNGNLNAENF--LRLYKTELSLKAG 539 LTVDFD+ F GGSSL ++G+L+ EN ++LYKT L ++ Sbjct: 427 PLTVDFDWEE----------------SFYGGSSLKLSGDLSKENATNVKLYKTNLLIEKD 470 Query: 540 SKLSISYNKPSAANSSSMSVGIILADDPNTVVKVPVPDSGRKTSGWVTKELDLSAYAGRT 599 +++ ++Y P + VGI DDP+ + + G WVT+++ L + G Sbjct: 471 TEIQLTYKTP--VKKHGLKVGISFLDDPDEFIFFDLKKQGDHE--WVTEKVKLKKHKGNQ 526 Query: 600 AAAFGLVFNPGQGVVNNYQMNIGQIRIT---DGTAVKPAAPAGLTIAKAFRDT--NEMVV 654 AA L Q + +YQ+ +G+++I+ D V P +F D ++ + Sbjct: 527 IAAISLYVESDQRIT-DYQLYVGELKISNKHDNQQVPPEVTEVKVSNHSFEDGIYADLSL 585 Query: 655 EWKLDPDYNKVKQYNVYVN-----DVYMGGKYDEVFYLKRL 690 EW + V+ Y VY + ++G + V+YL +L Sbjct: 586 EWTGGEN---VRHYEVYRHLANGEKEFLGATPNNVYYLSKL 623 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.132 0.408 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,662,532,891 Number of extensions: 208140140 Number of successful extensions: 345321 Number of sequences better than 1.0e-05: 89 Number of HSP's gapped: 345058 Number of HSP's successfully gapped: 152 Length of query: 718 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 575 Effective length of database: 1,713,491,058 Effective search space: 985257358350 Effective search space used: 985257358350 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 135 (56.6 bits)