BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0359.0016.p (763 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KJ61.1 B3KJ61_9BACI Nitrate reductase, alpha subunit EC=1.7.99.4 1292 0.0 Q5WK51.1 Q5WK51_BACSK Respiratory nitrate reductase alpha chain ... 1271 0.0 B9E9D2.1 B9E9D2_MACCJ Respiratory nitrate reductase alpha chain 1199 0.0 B9DL95.1 B9DL95_STACT Respiratory nitrate reductase alpha chain ... 1150 0.0 Q9ZIF8.1 Q9ZIF8_STACA NarG 1145 0.0 >B3KJ61.1 B3KJ61_9BACI Nitrate reductase, alpha subunit EC=1.7.99.4 Length = 1224 Score = 1292 bits (3343), Expect = 0.0, Method: Compositional matrix adjust. Identities = 607/726 (83%), Positives = 663/726 (91%), Gaps = 3/726 (0%) Query: 1 MKKKYGLNFFKPVESYSGNWSILEEKNRDWEDMYRQRWSHDKVVRTTHGVNCTGSCSWKV 60 M++K GL FFK +ESYSGNWS+LEEK+R+WEDMYR+RWSHDKVVRTTHGVNCTGSCSWKV Sbjct: 1 MRRKSGLKFFKRMESYSGNWSVLEEKSREWEDMYRKRWSHDKVVRTTHGVNCTGSCSWKV 60 Query: 61 FVKNGIITWENQQIDYPSCGPDMPEFEPRGCPRGATFSWYEYSPLRVKYPYMRGKLWRLW 120 FVKNGIITWENQQIDYPSCGPDMPEFEPRGCPRGA+FSWYEYSPLRVKYPYMRG+LW +W Sbjct: 61 FVKNGIITWENQQIDYPSCGPDMPEFEPRGCPRGASFSWYEYSPLRVKYPYMRGRLWHMW 120 Query: 121 KAALLEHDNPVDAWASIVEDPAKAGSYKKARGXXXKGGHIRVAWEDALRLISAQLIYTIR 180 K AL EH +P+ AWASIVEDPAK+ SYK+ARG KGGH+RV+W++A +LI+AQLIYTIR Sbjct: 121 KEALNEHGDPIAAWASIVEDPAKSKSYKQARG---KGGHVRVSWQEATKLIAAQLIYTIR 177 Query: 181 KYGPDRIAGFTPIPAMSMVSYASGARFISLLGGQMLSFYDWYADLPPASPQIWGEQTDVP 240 KYGPDRIAGFTPIPAMSM+SYASGARFISLLGG+MLSFYDWYADLPPASPQIWGEQTDVP Sbjct: 178 KYGPDRIAGFTPIPAMSMISYASGARFISLLGGEMLSFYDWYADLPPASPQIWGEQTDVP 237 Query: 241 ESSDWYNAGYLMMWGSNVPLTRTPDAHFMTEVRYKGTKVVSVAPDLAENVKFADNWLAPN 300 ESSDWYNAGYL+MWGSNVPLTRTPDAHFMTEVRYKGTKVVSVAPD AENVKFADNWLAPN Sbjct: 238 ESSDWYNAGYLIMWGSNVPLTRTPDAHFMTEVRYKGTKVVSVAPDYAENVKFADNWLAPN 297 Query: 301 PGTDAALAQAMTHVILKEFYNEREEPMFINYAKQFTDMPFIILLDPHESSLKGGRFLRAS 360 PGTDAA+AQAMTHVILKEFY+ER+EPMF+NYAKQ+TDMPF+ILLD +E K GRFLRAS Sbjct: 298 PGTDAAIAQAMTHVILKEFYHERQEPMFLNYAKQYTDMPFLILLDEYEGGYKAGRFLRAS 357 Query: 361 DLGEASPHADWKPVIYDTVSGELIVPNGTMGQRWETDKKWNLILEQEDGTKIDPALSVES 420 DLG+AS HA+WKPVI D + E+IVPNGTMGQRWE DKKWNLILE+EDG+ I PALSVES Sbjct: 358 DLGDASQHAEWKPVIIDENTNEIIVPNGTMGQRWEQDKKWNLILEREDGSVIAPALSVES 417 Query: 421 LGGQWEEIVFPYFDQAGNGTFKRIIPAMKIRLADGTERYAATVYDLMLSQYGIARTESPW 480 G + + I FP+FD NGTFKR IPA KI+LADGTER AATVYDLMLSQYGI + ES Sbjct: 418 QGAERQTIRFPFFDNRANGTFKRQIPAKKIQLADGTERLAATVYDLMLSQYGIGQAESGL 477 Query: 481 NAKGYDDSSSHYTPAWQEKITSVKSSVVVQIAREFAQNSLDTGGRSMIIMGAGINHWFNS 540 A GY+D+ YTPAWQE IT VK+SVVVQIAREFAQNSLDTGGRSMIIMGAGINHWFNS Sbjct: 478 AASGYEDAEFDYTPAWQENITGVKASVVVQIAREFAQNSLDTGGRSMIIMGAGINHWFNS 537 Query: 541 DTIYRSILNLVVLTASQGVNGGGWAHYVGQEKCRPIEGWSTIAFAKDWQGPARQQNATSF 600 DTIYRSILNLV+LTASQGVNGGGWAHYVGQEKCRPIEGWST+AFAKDWQGP RQQNATSF Sbjct: 538 DTIYRSILNLVILTASQGVNGGGWAHYVGQEKCRPIEGWSTVAFAKDWQGPPRQQNATSF 597 Query: 601 FYFATEQWRYEESGTDSLKSPTAGEVAYQHPADYNVLAARLGWLPSFPQFNKNSLLFAEE 660 FYFAT+QW+YEE G DSLKSPT GE+ Y+HPADYNVLAARLGWLPS+PQFNKNSL FAEE Sbjct: 598 FYFATDQWKYEEMGADSLKSPTGGEIRYRHPADYNVLAARLGWLPSYPQFNKNSLTFAEE 657 Query: 661 AAQQGKKSNADIIAHSLEEIKSRKTRFAVEDPGAPENFPRSLFIWRSNLISSSAKGQEYF 720 AA QGK SN DI+ H+LE+I S T+FA EDPGAPENFPRSLF+WRSNLISSSAKGQEYF Sbjct: 658 AALQGKTSNEDIVKHTLEQIVSGDTKFAAEDPGAPENFPRSLFVWRSNLISSSAKGQEYF 717 Query: 721 MKHLLG 726 MKHLLG Sbjct: 718 MKHLLG 723 >Q5WK51.1 Q5WK51_BACSK Respiratory nitrate reductase alpha chain EC=1.7.99.4 Length = 1224 Score = 1271 bits (3290), Expect = 0.0, Method: Compositional matrix adjust. Identities = 595/726 (81%), Positives = 655/726 (90%), Gaps = 3/726 (0%) Query: 1 MKKKYGLNFFKPVESYSGNWSILEEKNRDWEDMYRQRWSHDKVVRTTHGVNCTGSCSWKV 60 MK+ GL FFK VESYS NWSILEEK+R+WEDMYR RWSHDKVVRTTHGVNCTGSCSWKV Sbjct: 1 MKRNKGLTFFKKVESYSDNWSILEEKSREWEDMYRNRWSHDKVVRTTHGVNCTGSCSWKV 60 Query: 61 FVKNGIITWENQQIDYPSCGPDMPEFEPRGCPRGATFSWYEYSPLRVKYPYMRGKLWRLW 120 FVK+GIITWENQQIDYPSCGPDMPEFEPRGCPRGA+FSWYEYSPLRVKYPYMRG+LWRLW Sbjct: 61 FVKSGIITWENQQIDYPSCGPDMPEFEPRGCPRGASFSWYEYSPLRVKYPYMRGRLWRLW 120 Query: 121 KAALLEHDNPVDAWASIVEDPAKAGSYKKARGXXXKGGHIRVAWEDALRLISAQLIYTIR 180 K AL +HD+PV AWASIVEDP KA SYK+ARG KGGH+RV+W+DA +LISAQLIYTIR Sbjct: 121 KEALKQHDDPVAAWASIVEDPEKANSYKQARG---KGGHVRVSWQDATQLISAQLIYTIR 177 Query: 181 KYGPDRIAGFTPIPAMSMVSYASGARFISLLGGQMLSFYDWYADLPPASPQIWGEQTDVP 240 KYGPDRIAGFTPIPAMSM+SYASG+RFISLLGG+MLSFYDWYADLPPASPQIWGEQTDVP Sbjct: 178 KYGPDRIAGFTPIPAMSMISYASGSRFISLLGGEMLSFYDWYADLPPASPQIWGEQTDVP 237 Query: 241 ESSDWYNAGYLMMWGSNVPLTRTPDAHFMTEVRYKGTKVVSVAPDLAENVKFADNWLAPN 300 ESSDWYNAGYL+MWGSNVPLTRTPDAHFMTEVRYKGTKVVSVAPD AENVKFADNWLAPN Sbjct: 238 ESSDWYNAGYLIMWGSNVPLTRTPDAHFMTEVRYKGTKVVSVAPDYAENVKFADNWLAPN 297 Query: 301 PGTDAALAQAMTHVILKEFYNEREEPMFINYAKQFTDMPFIILLDPHESSLKGGRFLRAS 360 PGTDAA+AQAMTHVIL E+Y++R+EPMF++YAKQ+TDMPF+ILL+ E K GRFLRAS Sbjct: 298 PGTDAAIAQAMTHVILNEYYHKRQEPMFLDYAKQYTDMPFLILLEEFEDGYKAGRFLRAS 357 Query: 361 DLGEASPHADWKPVIYDTVSGELIVPNGTMGQRWETDKKWNLILEQEDGTKIDPALSVES 420 DLGE SPHA+WKPV+ D + E++VPNGTMGQRWE K+WNLILE+EDG+ I PALSVE Sbjct: 358 DLGETSPHAEWKPVLIDETTEEVLVPNGTMGQRWEEGKQWNLILEREDGSVISPALSVEP 417 Query: 421 LGGQWEEIVFPYFDQAGNGTFKRIIPAMKIRLADGTERYAATVYDLMLSQYGIARTESPW 480 G ++ I FP+FD AG+GTFKR+IP I+LADGT+R AATVYDLMLSQYGI R S W Sbjct: 418 HGEAFQTIYFPFFDNAGSGTFKRVIPVRTIQLADGTKRLAATVYDLMLSQYGIQRIGSEW 477 Query: 481 NAKGYDDSSSHYTPAWQEKITSVKSSVVVQIAREFAQNSLDTGGRSMIIMGAGINHWFNS 540 A GY+D +S YTPAWQE IT VK+SVVVQIAREFAQNSLDTGGRSMIIMGAGINHWFNS Sbjct: 478 EADGYEDETSKYTPAWQESITGVKASVVVQIAREFAQNSLDTGGRSMIIMGAGINHWFNS 537 Query: 541 DTIYRSILNLVVLTASQGVNGGGWAHYVGQEKCRPIEGWSTIAFAKDWQGPARQQNATSF 600 DTIYR+ILNLV+LTASQGVNGGGWAHYVGQEKCRPIEGWST+AFAKDWQGP RQQNATSF Sbjct: 538 DTIYRAILNLVILTASQGVNGGGWAHYVGQEKCRPIEGWSTVAFAKDWQGPPRQQNATSF 597 Query: 601 FYFATEQWRYEESGTDSLKSPTAGEVAYQHPADYNVLAARLGWLPSFPQFNKNSLLFAEE 660 FYFAT+QW+YEE T+SLKSPT GE Y HPADYNVLAARLGWLPS+PQFNK+SL FAEE Sbjct: 598 FYFATDQWKYEEMDTESLKSPTGGETRYTHPADYNVLAARLGWLPSYPQFNKSSLAFAEE 657 Query: 661 AAQQGKKSNADIIAHSLEEIKSRKTRFAVEDPGAPENFPRSLFIWRSNLISSSAKGQEYF 720 A QQGK +N DI+ H+ E+I S KT FA EDP APENFPR++F+WRSNLISSSAKGQEYF Sbjct: 658 AKQQGKTNNEDIVKHAYEQIVSGKTTFAAEDPDAPENFPRTMFVWRSNLISSSAKGQEYF 717 Query: 721 MKHLLG 726 MKHLLG Sbjct: 718 MKHLLG 723 >B9E9D2.1 B9E9D2_MACCJ Respiratory nitrate reductase alpha chain Length = 1224 Score = 1199 bits (3101), Expect = 0.0, Method: Compositional matrix adjust. Identities = 550/721 (76%), Positives = 630/721 (87%), Gaps = 3/721 (0%) Query: 6 GLNFFKPVESYSGNWSILEEKNRDWEDMYRQRWSHDKVVRTTHGVNCTGSCSWKVFVKNG 65 GL FFKP E ++GNWS+LEEK+R+WE MYRQRWSHDKVVRTTHGVNCTGSCSWKVFVKNG Sbjct: 6 GLRFFKPTEKFNGNWSVLEEKSREWEKMYRQRWSHDKVVRTTHGVNCTGSCSWKVFVKNG 65 Query: 66 IITWENQQIDYPSCGPDMPEFEPRGCPRGATFSWYEYSPLRVKYPYMRGKLWRLWKAALL 125 IITWENQQIDYPSCGPDMPEFEPRGCPRGA+FSWYEYSPLR+K+PY+RG LWR+W+ AL Sbjct: 66 IITWENQQIDYPSCGPDMPEFEPRGCPRGASFSWYEYSPLRIKFPYVRGILWRMWQEALE 125 Query: 126 EHDNPVDAWASIVEDPAKAGSYKKARGXXXKGGHIRVAWEDALRLISAQLIYTIRKYGPD 185 +PV AW SIVED KA +YK+ARG GGH+RV W + +LI+AQLIYTI+KYGPD Sbjct: 126 TTGDPVRAWQSIVEDETKAKAYKQARGM---GGHVRVNWREVTQLIAAQLIYTIKKYGPD 182 Query: 186 RIAGFTPIPAMSMVSYASGARFISLLGGQMLSFYDWYADLPPASPQIWGEQTDVPESSDW 245 RIAGFTPIPAMSM+SYASGARFISLLGG+MLSFYDWYADLPPASPQ+WGEQTDVPESSDW Sbjct: 183 RIAGFTPIPAMSMISYASGARFISLLGGEMLSFYDWYADLPPASPQVWGEQTDVPESSDW 242 Query: 246 YNAGYLMMWGSNVPLTRTPDAHFMTEVRYKGTKVVSVAPDLAENVKFADNWLAPNPGTDA 305 YNAGY++MWGSNVPLTRTPDAHFMTEVRYKG KVVSVAPD AENVKFADNWLAPNPGTDA Sbjct: 243 YNAGYIIMWGSNVPLTRTPDAHFMTEVRYKGAKVVSVAPDYAENVKFADNWLAPNPGTDA 302 Query: 306 ALAQAMTHVILKEFYNEREEPMFINYAKQFTDMPFIILLDPHESSLKGGRFLRASDLGEA 365 ALAQ MTHVIL EFY +R+EPMFI YAKQ+TDMPF+I+LD HE +LK GRFLR+SDLG+ Sbjct: 303 ALAQGMTHVILDEFYEKRQEPMFIEYAKQYTDMPFLIMLDKHEDTLKAGRFLRSSDLGDN 362 Query: 366 SPHADWKPVIYDTVSGELIVPNGTMGQRWETDKKWNLILEQEDGTKIDPALSVESLGGQW 425 S H++WKPV++D +S ++VPNGTMGQRWE D KWN+ LE DG KI PA++++ G + Sbjct: 363 SEHSEWKPVVFDELSNSIVVPNGTMGQRWEKDVKWNIKLETADGIKIAPAMTIKDKGHEV 422 Query: 426 EEIVFPYFDQAGNGTFKRIIPAMKIRLADGTERYAATVYDLMLSQYGIARTESPWNAKGY 485 E+VFP+FD AGNGTFKR I A K+ L DGTE+Y AT+YDLMLSQYG+ R + AKGY Sbjct: 423 VEVVFPFFDNAGNGTFKRPIAAKKVTLNDGTEQYVATIYDLMLSQYGVNRFNTDLEAKGY 482 Query: 486 DDSSSHYTPAWQEKITSVKSSVVVQIAREFAQNSLDTGGRSMIIMGAGINHWFNSDTIYR 545 DD +S YTPAWQEKIT VK S+VVQ+ REFAQN++DTGGRSMIIMGAGINHWFNSDTIYR Sbjct: 483 DDETSIYTPAWQEKITGVKPSIVVQVGREFAQNAIDTGGRSMIIMGAGINHWFNSDTIYR 542 Query: 546 SILNLVVLTASQGVNGGGWAHYVGQEKCRPIEGWSTIAFAKDWQGPARQQNATSFFYFAT 605 S+LNLV L A+QGVNGGGWAHYVGQEKCRPIEGWSTIAFAKDWQGP R QNATS+FYFAT Sbjct: 543 SVLNLVTLCATQGVNGGGWAHYVGQEKCRPIEGWSTIAFAKDWQGPPRLQNATSWFYFAT 602 Query: 606 EQWRYEESGTDSLKSPTAGEVAYQHPADYNVLAARLGWLPSFPQFNKNSLLFAEEAAQQG 665 +QW+YEESG D+L SP A V +QHPADYNVLAARLGWLPS+PQF+ NSLLF E+A + G Sbjct: 603 DQWKYEESGVDALTSPLAENVKHQHPADYNVLAARLGWLPSYPQFDTNSLLFGEDAREAG 662 Query: 666 KKSNADIIAHSLEEIKSRKTRFAVEDPGAPENFPRSLFIWRSNLISSSAKGQEYFMKHLL 725 +N +I+ ++E +KSR+T+FAVEDP +N P++LF+WRSNLISSSAKGQEYFMKHLL Sbjct: 663 NFTNEEILKRAVESVKSRETKFAVEDPDNKKNHPKTLFVWRSNLISSSAKGQEYFMKHLL 722 Query: 726 G 726 G Sbjct: 723 G 723 >B9DL95.1 B9DL95_STACT Respiratory nitrate reductase alpha chain EC=1.7.99.4 Length = 1224 Score = 1150 bits (2976), Expect = 0.0, Method: Compositional matrix adjust. Identities = 531/724 (73%), Positives = 615/724 (84%), Gaps = 4/724 (0%) Query: 4 KYGLNFFKPVESYSGNWSILEEKNRDWEDMYRQRWSHDKVVRTTHGVNCTGSCSWKVFVK 63 K+G+NFFKP E ++GNWS+L +K+R+WE MYR+RWSHDKVVRTTHGVNCTGSCSWKVFVK Sbjct: 3 KFGMNFFKPTEKFNGNWSVLTDKSREWEKMYRERWSHDKVVRTTHGVNCTGSCSWKVFVK 62 Query: 64 NGIITWENQQIDYPSCGPDMPEFEPRGCPRGATFSWYEYSPLRVKYPYMRGKLWRLWKAA 123 NG+ITWENQQ DYPSCGPDMPEFEPRGCPRGA+FSWYEYSPLRV+YPYMRGKLW LW A Sbjct: 63 NGVITWENQQTDYPSCGPDMPEFEPRGCPRGASFSWYEYSPLRVRYPYMRGKLWELWTTA 122 Query: 124 LLEHD-NPVDAWASIVEDPAKAGSYKKARGXXXKGGHIRVAWEDALRLISAQLIYTIRKY 182 L EH+ N + AWASIVEDP KA YK ARG KGGH+RV+W+D L+LI+AQL+YTI+K Sbjct: 123 LEEHEGNNIAAWASIVEDPEKAKIYKNARG---KGGHMRVSWKDVLQLIAAQLLYTIKKD 179 Query: 183 GPDRIAGFTPIPAMSMVSYASGARFISLLGGQMLSFYDWYADLPPASPQIWGEQTDVPES 242 GPDRIAGFTPIPAMSM+SYASGARFI+L+GG+MLSFYDWYADLPPASPQIWGEQTDVPES Sbjct: 180 GPDRIAGFTPIPAMSMLSYASGARFINLMGGEMLSFYDWYADLPPASPQIWGEQTDVPES 239 Query: 243 SDWYNAGYLMMWGSNVPLTRTPDAHFMTEVRYKGTKVVSVAPDLAENVKFADNWLAPNPG 302 SDWYNA Y++MWGSNVPLTRTPDAHFMTEVRYKGTKVVSVAPD AENVKFADNWLAPNPG Sbjct: 240 SDWYNANYIIMWGSNVPLTRTPDAHFMTEVRYKGTKVVSVAPDYAENVKFADNWLAPNPG 299 Query: 303 TDAALAQAMTHVILKEFYNEREEPMFINYAKQFTDMPFIILLDPHESSLKGGRFLRASDL 362 TDAA+AQAMTHVIL+++Y + MF+NYAKQ+TDMPF+++ D HE K GRFLRASDL Sbjct: 300 TDAAVAQAMTHVILQKYYVDEPSEMFVNYAKQYTDMPFLLMFDEHEGGYKAGRFLRASDL 359 Query: 363 GEASPHADWKPVIYDTVSGELIVPNGTMGQRWETDKKWNLILEQEDGTKIDPALSVESLG 422 G S + +WKPVI D SGE+IVPNGTMGQRWE K+WNL LE EDG+K+DPALSV Sbjct: 360 GMESENNEWKPVIVDNESGEIIVPNGTMGQRWEEGKQWNLKLENEDGSKVDPALSVAEGE 419 Query: 423 GQWEEIVFPYFDQAGNGTFKRIIPAMKIRLADGTERYAATVYDLMLSQYGIARTESPWNA 482 + + FPYFD AGNG F+R I + ++ LADG + ATVYDLM SQYGI R A Sbjct: 420 HDIDIMKFPYFDNAGNGIFERPIASREVTLADGKKVKVATVYDLMTSQYGIRRFNHELEA 479 Query: 483 KGYDDSSSHYTPAWQEKITSVKSSVVVQIAREFAQNSLDTGGRSMIIMGAGINHWFNSDT 542 KG+DD+ + YTPAWQE + VK V+ Q+A EFAQN++DTGGRSMIIMGAGINHWFNSDT Sbjct: 480 KGFDDAETQYTPAWQEAVAGVKQDVITQVATEFAQNAIDTGGRSMIIMGAGINHWFNSDT 539 Query: 543 IYRSILNLVVLTASQGVNGGGWAHYVGQEKCRPIEGWSTIAFAKDWQGPARQQNATSFFY 602 IYR++LNLV+L QGVNGGGWAHYVGQEKCRPIEGWSTIAFAKDWQGP R QN TS+FY Sbjct: 540 IYRAVLNLVMLCGCQGVNGGGWAHYVGQEKCRPIEGWSTIAFAKDWQGPPRLQNGTSWFY 599 Query: 603 FATEQWRYEESGTDSLKSPTAGEVAYQHPADYNVLAARLGWLPSFPQFNKNSLLFAEEAA 662 F T+QW+YEESG D L SP AGE+ ++HPADYNV AARLGWLPS+PQF+ NSL F E+A Sbjct: 600 FTTDQWKYEESGVDKLASPLAGELKHKHPADYNVTAARLGWLPSYPQFDTNSLRFGEDAK 659 Query: 663 QQGKKSNADIIAHSLEEIKSRKTRFAVEDPGAPENFPRSLFIWRSNLISSSAKGQEYFMK 722 + G+ +N +++ ++E +KSR+T+FAVEDP N P+SLFIWRSNL+SSSAKGQEYFMK Sbjct: 660 EAGEFTNEEVLKRAVESVKSRETKFAVEDPDLRTNHPKSLFIWRSNLLSSSAKGQEYFMK 719 Query: 723 HLLG 726 H+LG Sbjct: 720 HMLG 723 >Q9ZIF8.1 Q9ZIF8_STACA NarG Length = 1224 Score = 1145 bits (2963), Expect = 0.0, Method: Compositional matrix adjust. Identities = 530/724 (73%), Positives = 614/724 (84%), Gaps = 4/724 (0%) Query: 4 KYGLNFFKPVESYSGNWSILEEKNRDWEDMYRQRWSHDKVVRTTHGVNCTGSCSWKVFVK 63 K+G+NFFKP E ++GNWS+L +K+R+WE MYR+RWSHDKVVRTTHGVNCTGSCSWKVFVK Sbjct: 3 KFGMNFFKPTEKFNGNWSVLTDKSREWEKMYRERWSHDKVVRTTHGVNCTGSCSWKVFVK 62 Query: 64 NGIITWENQQIDYPSCGPDMPEFEPRGCPRGATFSWYEYSPLRVKYPYMRGKLWRLWKAA 123 NG+ITWENQQ DYPSCGPDMPEFEPRGCPRGA+FSWYEYSPLRV+YPYMRGKLW LW A Sbjct: 63 NGVITWENQQTDYPSCGPDMPEFEPRGCPRGASFSWYEYSPLRVRYPYMRGKLWELWTTA 122 Query: 124 LLEHD-NPVDAWASIVEDPAKAGSYKKARGXXXKGGHIRVAWEDALRLISAQLIYTIRKY 182 L EH+ N + AWASIVEDP KA YK ARG KGGH+RV+W+D L+LI+AQL+YTI+K Sbjct: 123 LEEHEGNNIAAWASIVEDPEKAKIYKNARG---KGGHMRVSWKDVLQLIAAQLLYTIKKD 179 Query: 183 GPDRIAGFTPIPAMSMVSYASGARFISLLGGQMLSFYDWYADLPPASPQIWGEQTDVPES 242 GPDRIAGFTPIPAMSM+SYASGARFI+L+GG+MLSFYDWYADLPPASPQIWGEQTDVPES Sbjct: 180 GPDRIAGFTPIPAMSMLSYASGARFINLMGGEMLSFYDWYADLPPASPQIWGEQTDVPES 239 Query: 243 SDWYNAGYLMMWGSNVPLTRTPDAHFMTEVRYKGTKVVSVAPDLAENVKFADNWLAPNPG 302 SDWYNA Y++MWGSNVPLTRTPDAHFMTEVRYKGTKVVSVAPD AENVKFADNWLAPNPG Sbjct: 240 SDWYNANYIIMWGSNVPLTRTPDAHFMTEVRYKGTKVVSVAPDYAENVKFADNWLAPNPG 299 Query: 303 TDAALAQAMTHVILKEFYNEREEPMFINYAKQFTDMPFIILLDPHESSLKGGRFLRASDL 362 TDAA+AQAMTHVIL+++Y + MF+NYAKQ+TDMPF+++ D HE K GRFLRASDL Sbjct: 300 TDAAVAQAMTHVILQKYYVDEPSEMFVNYAKQYTDMPFLLMFDEHEGGYKAGRFLRASDL 359 Query: 363 GEASPHADWKPVIYDTVSGELIVPNGTMGQRWETDKKWNLILEQEDGTKIDPALSVESLG 422 G S + +WKPVI D SGE+IVPNGTMGQRWE K+WNL LE EDG+K+DPALSV Sbjct: 360 GMESENNEWKPVIVDNESGEIIVPNGTMGQRWEEGKQWNLKLENEDGSKVDPALSVAEGE 419 Query: 423 GQWEEIVFPYFDQAGNGTFKRIIPAMKIRLADGTERYAATVYDLMLSQYGIARTESPWNA 482 + + FPYFD AGNG F+R I + ++ LADG + ATVYDLM SQYGI R A Sbjct: 420 HDIDIMKFPYFDNAGNGIFERPIASREVTLADGKKVKVATVYDLMTSQYGIRRFNHELEA 479 Query: 483 KGYDDSSSHYTPAWQEKITSVKSSVVVQIAREFAQNSLDTGGRSMIIMGAGINHWFNSDT 542 KG+DD+ + YTPAWQE + VK V+ Q+A EFAQN++DTGGRSMIIMGAGINHW NSDT Sbjct: 480 KGFDDAETPYTPAWQEAVAGVKQDVITQVATEFAQNAIDTGGRSMIIMGAGINHWSNSDT 539 Query: 543 IYRSILNLVVLTASQGVNGGGWAHYVGQEKCRPIEGWSTIAFAKDWQGPARQQNATSFFY 602 IYR++LNLV+L QGVNGGGWAHYVGQEKCRPIEGWSTIAFAKDWQGP R QN TS+FY Sbjct: 540 IYRAVLNLVMLCGCQGVNGGGWAHYVGQEKCRPIEGWSTIAFAKDWQGPPRLQNGTSWFY 599 Query: 603 FATEQWRYEESGTDSLKSPTAGEVAYQHPADYNVLAARLGWLPSFPQFNKNSLLFAEEAA 662 F T+QW+YEESG D L SP AGE+ ++HPADYNV AARLGWLPS+PQF+ NSL F E+A Sbjct: 600 FTTDQWKYEESGVDKLASPLAGELKHKHPADYNVTAARLGWLPSYPQFDTNSLRFGEDAK 659 Query: 663 QQGKKSNADIIAHSLEEIKSRKTRFAVEDPGAPENFPRSLFIWRSNLISSSAKGQEYFMK 722 + G+ +N +++ ++E +KSR+T+FAVEDP N P+SLFIWRSNL+SSSAKGQEYFMK Sbjct: 660 EAGEFTNEEVLKRAVESVKSRETKFAVEDPDLRTNHPKSLFIWRSNLLSSSAKGQEYFMK 719 Query: 723 HLLG 726 H+LG Sbjct: 720 HMLG 723 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.133 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,916,025,043 Number of extensions: 214573572 Number of successful extensions: 465424 Number of sequences better than 1.0e-05: 2952 Number of HSP's gapped: 459598 Number of HSP's successfully gapped: 2991 Length of query: 763 Length of database: 3,060,696,203 Length adjustment: 144 Effective length of query: 619 Effective length of database: 1,704,070,043 Effective search space: 1054819356617 Effective search space used: 1054819356617 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 135 (56.6 bits)