BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0358.0003.p
         (85 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C0Z8U3.1 C0Z8U3_BREBN Putative uncharacterized protein                135   1e-30
B1DD36.1 B1DD36_9BACL Putative uncharacterized protein                126   7e-28
A3IGD5.1 A3IGD5_9BACI Putative uncharacterized protein                 84   3e-15
B3KC51.1 B3KC51_9BACI Activator of Hsp90 ATPase 1 family protein       82   2e-14
C1U6E4.1 C1U6E4_9SPHI Putative uncharacterized protein                 59   2e-07

>C0Z8U3.1 C0Z8U3_BREBN Putative uncharacterized protein
          Length = 121

 Score =  135 bits (340), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 64/85 (75%), Positives = 72/85 (84%)

Query: 1   VKLWLGNVSPLAFNEGEVFTSDEGISGQLRIVKPFSQLRLKWGKKEWEKPSTLQIRLLSN 60
            KLWLG+V+ L F+EGE FTS +GISGQ R+VKPF Q RLKW  K+WEKPSTLQIRLLS+
Sbjct: 18  AKLWLGHVANLTFSEGETFTSSDGISGQFRVVKPFRQFRLKWSMKDWEKPSTLQIRLLSD 77

Query: 61  HHDRTTISFHQENLDHPNTREQMKL 85
             D+TTISFHQENLDH NTREQMKL
Sbjct: 78  KPDQTTISFHQENLDHENTREQMKL 102


>B1DD36.1 B1DD36_9BACL Putative uncharacterized protein
          Length = 141

 Score =  126 bits (316), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 59/85 (69%), Positives = 68/85 (80%)

Query: 1   VKLWLGNVSPLAFNEGEVFTSDEGISGQLRIVKPFSQLRLKWGKKEWEKPSTLQIRLLSN 60
           +KLW+GNV  ++   GE F S EGISG+LRIVKP  QLRLKW K  WEKPSTLQIRL+S+
Sbjct: 41  LKLWIGNVKDISIEAGETFQSTEGISGELRIVKPLQQLRLKWSKPGWEKPSTLQIRLISS 100

Query: 61  HHDRTTISFHQENLDHPNTREQMKL 85
           H  +TT+SFHQENLDH  TREQMKL
Sbjct: 101 HPGKTTVSFHQENLDHAATREQMKL 125


>A3IGD5.1 A3IGD5_9BACI Putative uncharacterized protein
          Length = 139

 Score = 84.3 bits (207), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 40/81 (49%), Positives = 57/81 (70%), Gaps = 1/81 (1%)

Query: 4   WLGNVSPLAFNEGEVFTSDEGISGQLRIVKPFSQLRLKWGKKEWEKPSTLQIRLLSNHHD 63
           WLG    +    G  + +  G +G++RIVKP  QLRL W K+EW++PST+QIR+LS  ++
Sbjct: 43  WLGGGGNIILKPGHQYRTTVG-TGEIRIVKPLLQLRLTWKKEEWQRPSTIQIRILSKENN 101

Query: 64  RTTISFHQENLDHPNTREQMK 84
           +TTISFHQE+L +   RE+MK
Sbjct: 102 KTTISFHQEHLANQQIREEMK 122


>B3KC51.1 B3KC51_9BACI Activator of Hsp90 ATPase 1 family protein
          Length = 197

 Score = 81.6 bits (200), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 53/84 (63%)

Query: 1   VKLWLGNVSPLAFNEGEVFTSDEGISGQLRIVKPFSQLRLKWGKKEWEKPSTLQIRLLSN 60
           + LW+G V  L    G+ + S EG+SG++ +V P+ +LRL W +KEW+ PS LQI +LS 
Sbjct: 93  LSLWIGAVPSLELRVGQEYESKEGVSGKITVVVPYHKLRLTWKRKEWDNPSRLQIYVLST 152

Query: 61  HHDRTTISFHQENLDHPNTREQMK 84
               TTI+ HQE LD    RE M+
Sbjct: 153 KTGNTTIAIHQEMLDDVYVREIMR 176


>C1U6E4.1 C1U6E4_9SPHI Putative uncharacterized protein
          Length = 214

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 4   WLGNVSPLAFNEGEVFTSDEGISGQLRIVKPFSQLRLKWGKKEWEKPSTLQIRLL---SN 60
           W+G++        E FT+ EGI+G + +++P S  R+ W    W + S LQ+R++   S 
Sbjct: 114 WVGDLENGTIGPAESFTTKEGITGTITVLQPGSHFRIAWQPLHWRQSSILQVRVIGSKSK 173

Query: 61  HHDRTTISFHQENLDHPNTREQMK 84
           +  ++ ISFH E L     R  MK
Sbjct: 174 NAGKSVISFHHEKLPGAGDRSAMK 197


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.316    0.133    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 534,422,609
Number of extensions: 17893773
Number of successful extensions: 39330
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 39329
Number of HSP's successfully gapped: 6
Length of query: 85
Length of database: 3,060,696,203
Length adjustment: 55
Effective length of query: 30
Effective length of database: 2,542,540,378
Effective search space: 76276211340
Effective search space used: 76276211340
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 126 (53.1 bits)