BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0352.0024.p (172 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q099H1.1 Q099H1_STIAU Putative uncharacterized protein 174 3e-42 Q1CWX8.1 Q1CWX8_MYXXD Putative uncharacterized protein 169 7e-41 B4X2S4.1 B4X2S4_9GAMM Putative uncharacterized protein 151 2e-35 B0SJU9.1 B0SJU9_LEPBP Putative uncharacterized protein 149 7e-35 B0S9M9.1 B0S9M9_LEPBA Putative uncharacterized protein 149 7e-35 >Q099H1.1 Q099H1_STIAU Putative uncharacterized protein Length = 205 Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 82/171 (47%), Positives = 117/171 (68%), Gaps = 1/171 (0%) Query: 2 GAKLHIYNSSEELVMYSQMKAFKLKEDIALFTDEGMETELLRIKARNVIDFSATYDVHDS 61 G HIY+ + L YS+MKAFKLKED+ +FT E M+ ++L I+AR ++DF ATYDV D Sbjct: 34 GGAFHIYDEAGGLAFYSKMKAFKLKEDLRVFTGEDMQEQVLTIQARTILDFGATYDVTDP 93 Query: 62 QTGEHLGALRRKGLKSIVKDEWILLDSRDQEIGLIKENSTFMALLRRFIT-LIPQKYNIE 120 +TGE LGALRRKG KS+++DEW++LD+RDQE+GLI+E+S +AL+RRF++ L+PQ + Sbjct: 94 RTGEKLGALRRKGFKSMLRDEWVVLDARDQEVGLIQEDSLALALVRRFLSNLVPQTFTGT 153 Query: 121 LRDITIPAFRQNFNPFVTKIIADFSEXXXXXXXXXXXXXXXXXXCAVEGKQ 171 + + +FRQ+FN F+ +I DFS CA+EG+Q Sbjct: 154 VGGEPVLSFRQHFNLFIQRISLDFSMDRSGRLDRRMGIAAAVLLCAIEGRQ 204 >Q1CWX8.1 Q1CWX8_MYXXD Putative uncharacterized protein Length = 209 Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 83/171 (48%), Positives = 113/171 (66%), Gaps = 1/171 (0%) Query: 2 GAKLHIYNSSEELVMYSQMKAFKLKEDIALFTDEGMETELLRIKARNVIDFSATYDVHDS 61 G HIY+ + L YS++KAFKLKEDI +++DE M ELL IKAR ++DF TYDV D+ Sbjct: 38 GDAFHIYDEAGNLAFYSKLKAFKLKEDIRIYSDEEMREELLTIKARGILDFGMTYDVTDA 97 Query: 62 QTGEHLGALRRKGLKSIVKDEWILLDSRDQEIGLIKENSTFMALLRRFIT-LIPQKYNIE 120 TGE +GALRRKGL+SI++D+W++LD+ DQE+G I+E+S +AL+RR +T LIPQ + Sbjct: 98 TTGERVGALRRKGLRSILRDQWLVLDANDQEVGKIEEDSMMLALVRRLLTALIPQSFTGT 157 Query: 121 LRDITIPAFRQNFNPFVTKIIADFSEXXXXXXXXXXXXXXXXXXCAVEGKQ 171 + + AF Q FNPF+ KI DFS CA+EG+Q Sbjct: 158 MGLNQVLAFHQRFNPFIQKIDLDFSMDTHRQLDRRFGIAAAVLMCAIEGRQ 208 >B4X2S4.1 B4X2S4_9GAMM Putative uncharacterized protein Length = 194 Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 73/177 (41%), Positives = 102/177 (57%), Gaps = 5/177 (2%) Query: 1 MGAKLHIYNSSEELVMYSQMKAFKLKEDIALFTDEGMETELLRIKARNVIDFSATYDVHD 60 G H+Y EL +YS MK F+++EDI L+ DE + ELLRI R++ DF+ YDVHD Sbjct: 18 FGDAFHLYTDDGELALYSNMKRFRIREDIRLYADESQDQELLRISTRSIFDFAGAYDVHD 77 Query: 61 SQTGEHLGALRRKGLK-SIVKDEWILLDSRDQEIGLIKENSTFMALLRRFIT----LIPQ 115 SQ+ EH+G LRR G K S ++D W LDS QEIG ++E+S AL+RR+I PQ Sbjct: 78 SQSDEHVGTLRRSGFKSSFLRDHWTFLDSGGQEIGTLQEDSMLKALVRRYIEALAFFFPQ 137 Query: 116 KYNIELRDITIPAFRQNFNPFVTKIIADFSEXXXXXXXXXXXXXXXXXXCAVEGKQD 172 Y+ + + + +RQ FNPF+ K+ DFS A+EG+Q+ Sbjct: 138 HYHATVGESPVAEYRQRFNPFILKLDVDFSADREGRLDKRLGIAAGVLMSAIEGRQE 194 >B0SJU9.1 B0SJU9_LEPBP Putative uncharacterized protein Length = 198 Score = 149 bits (377), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 77/147 (52%), Positives = 102/147 (69%), Gaps = 2/147 (1%) Query: 1 MGAKLHIYNSSE-ELVMYSQMKAFKLKEDIALFTDEGMETELLRIKARNVIDFSATYDVH 59 G ++ I++ S+ +L+ + + KAFKLKEDI ++ DE ELL+IKAR+VIDFSA YDV Sbjct: 25 FGGEIRIFDESKNKLLFFVKQKAFKLKEDITVYADESKSKELLKIKARSVIDFSAIYDVV 84 Query: 60 DSQTGEHLGALRRKGLKSIVKDEWILLDSRDQEIGLIKENSTFMALLRRFIT-LIPQKYN 118 D T E LG+LRRKG KSI+KD W +LD +DQ +G I E+S F A+LRRF+T LIPQK+ Sbjct: 85 DVTTNETLGSLRRKGFKSILKDSWEILDVKDQVVGSIDEDSMFKAILRRFLTNLIPQKFF 144 Query: 119 IELRDITIPAFRQNFNPFVTKIIADFS 145 I + +Q FNPFV + DFS Sbjct: 145 ITFNKNQVGVLQQTFNPFVPQFNIDFS 171 >B0S9M9.1 B0S9M9_LEPBA Putative uncharacterized protein Length = 198 Score = 149 bits (377), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 77/147 (52%), Positives = 102/147 (69%), Gaps = 2/147 (1%) Query: 1 MGAKLHIYNSSE-ELVMYSQMKAFKLKEDIALFTDEGMETELLRIKARNVIDFSATYDVH 59 G ++ I++ S+ +L+ + + KAFKLKEDI ++ DE ELL+IKAR+VIDFSA YDV Sbjct: 25 FGGEIRIFDESKNKLLFFVKQKAFKLKEDITVYADESKSKELLKIKARSVIDFSAIYDVV 84 Query: 60 DSQTGEHLGALRRKGLKSIVKDEWILLDSRDQEIGLIKENSTFMALLRRFIT-LIPQKYN 118 D T E LG+LRRKG KSI+KD W +LD +DQ +G I E+S F A+LRRF+T LIPQK+ Sbjct: 85 DVTTNETLGSLRRKGFKSILKDSWEILDVKDQVVGSIDEDSMFKAILRRFLTNLIPQKFF 144 Query: 119 IELRDITIPAFRQNFNPFVTKIIADFS 145 I + +Q FNPFV + DFS Sbjct: 145 ITFNKNQVGVLQQTFNPFVPQFNIDFS 171 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.137 0.385 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 815,742,047 Number of extensions: 29112056 Number of successful extensions: 64735 Number of sequences better than 1.0e-05: 25 Number of HSP's gapped: 64725 Number of HSP's successfully gapped: 25 Length of query: 172 Length of database: 3,060,696,203 Length adjustment: 126 Effective length of query: 46 Effective length of database: 1,873,648,313 Effective search space: 86187822398 Effective search space used: 86187822398 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 126 (53.1 bits)