BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0352.0019.p (450 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DDY8.1 B1DDY8_9BACL Putative uncharacterized protein 618 e-175 B3KBM6.1 B3KBM6_9BACI Putative uncharacterized protein 615 e-174 C0Z7V2.1 C0Z7V2_BREBN Putative uncharacterized protein 285 9e-75 C5D6K2.1 C5D6K2_9BACI Putative uncharacterized protein 263 3e-68 A7GLN0.1 A7GLN0_BACCN Putative uncharacterized protein 256 3e-66 >B1DDY8.1 B1DDY8_9BACL Putative uncharacterized protein Length = 458 Score = 618 bits (1594), Expect = e-175, Method: Compositional matrix adjust. Identities = 278/447 (62%), Positives = 364/447 (81%), Gaps = 2/447 (0%) Query: 1 VHFTKQPQRVVYVSGELMKSLKLSGKKNIRLRLGKDAIPATIKPIKRAGKHLFLASGVKS 60 VHF++Q +V+Y+S L+K LKLSGKK + L+LGK+ I ++P++R G HL+L++GV+ Sbjct: 8 VHFSQQSDKVIYLSNTLLKELKLSGKKTVHLKLGKEVITTAVRPVRRQGNHLYLSAGVRQ 67 Query: 61 AIKIPKSGGVYLRNLQNDEVQLGPLVGVLSDG--PSSPGNPFGSRTGFIKQLLREGSNKC 118 I++PK+G +++ +EVQ+GPL+GVLSD S G PFG RT FIKQ++R G K Sbjct: 68 YIRVPKTGSIFVHKNGENEVQIGPLIGVLSDSGYTQSDGQPFGMRTNFIKQIIRSGDRKA 127 Query: 119 YIFAFMPRDIDWQQERVNGYFLNASGKFERKLVPLPDVVYNRLPSRRAETSPYINQLRER 178 ++F F P+DI+WQQE V GYFLN+ G + RK VPLPDV+YNRL SR+AETS YI LRER Sbjct: 128 FLFGFTPQDINWQQETVLGYFLNSQGGWYRKTVPLPDVIYNRLRSRKAETSNYIGSLRER 187 Query: 179 FGRKKIPYFNWSFFNKSDIYRMLENDGVANRFVPETRSNPSPEEMRDMLDRHHFVYYKPS 238 RKKIP+FNW FFNKSD+Y++L+ND A + +PE+ S P+ E+++ +L++HHFVY+KP+ Sbjct: 188 LLRKKIPFFNWGFFNKSDVYKLLDNDPEALQHLPESVSAPTSEKLKQLLEKHHFVYFKPT 247 Query: 239 AGSLGHGIYRLTYLQKKGYFARYRKNGKNVLLRFASFDSLMRMLRSRHGNSLQSYVVQQG 298 AGSLG GIYRLTY K+GYFARYRKNGKNVLLRF+SF+SL +ML++RHG +L SYV QQG Sbjct: 248 AGSLGVGIYRLTYHPKRGYFARYRKNGKNVLLRFSSFNSLYKMLQARHGATLSSYVAQQG 307 Query: 299 IRLIEIDSCPIDFRFHMHKNGSNQWVVVGIGAKKAGRGSVTTHLKNGGALLTPQQALGRV 358 IRL+EID CP+DFRFHMHKNG N+WV GIGAKKAG+GSVTTH+KNGG+L+TP+QAL R Sbjct: 308 IRLVEIDGCPLDFRFHMHKNGKNEWVPAGIGAKKAGKGSVTTHVKNGGSLMTPEQALNRA 367 Query: 359 FGARADEVLQRAKATAVKLAESLELQHRHLLGEIGFDLGIDQDEDIWMFEANAKPGRSIF 418 FGA+ E+L+ AK ++K+AE++E + H LGE+G D+GID+D DIWMFEANAKPGRSIF Sbjct: 368 FGAKGKEILENAKKVSIKMAEAIERNYPHRLGELGLDIGIDKDNDIWMFEANAKPGRSIF 427 Query: 419 RHPSLRAEGKASIEHILEHCLYLSKFR 445 +HPSL AEG+AS+E I++HCLYLSKF+ Sbjct: 428 KHPSLEAEGRASVECIVDHCLYLSKFQ 454 >B3KBM6.1 B3KBM6_9BACI Putative uncharacterized protein Length = 455 Score = 615 bits (1585), Expect = e-174, Method: Compositional matrix adjust. Identities = 284/446 (63%), Positives = 375/446 (84%) Query: 1 VHFTKQPQRVVYVSGELMKSLKLSGKKNIRLRLGKDAIPATIKPIKRAGKHLFLASGVKS 60 +HF++QP++VV++SG L+KSL LS KK+I+LR+G +++ A +KPI+R+GKH++L+SGV++ Sbjct: 8 IHFSQQPEKVVFLSGSLLKSLGLSSKKSIKLRIGTNSVSAALKPIERSGKHIYLSSGVRN 67 Query: 61 AIKIPKSGGVYLRNLQNDEVQLGPLVGVLSDGPSSPGNPFGSRTGFIKQLLREGSNKCYI 120 ++ +P+ G VY+++ + E++LGP+VGVLSDGP +P +PFG+RT +I+QLLREG+ K ++ Sbjct: 68 SVNVPRQGPVYIQSPREGELELGPVVGVLSDGPPNPSSPFGARTSYIRQLLREGNKKMFV 127 Query: 121 FAFMPRDIDWQQERVNGYFLNASGKFERKLVPLPDVVYNRLPSRRAETSPYINQLRERFG 180 +AF PRDI+WQ+E V+ Y L + G F RK VPLPDVVYNRLPSR+ + SP+ NQLR+RFG Sbjct: 128 YAFAPRDINWQRETVHAYMLGSGGGFIRKTVPLPDVVYNRLPSRKTDFSPFTNQLRDRFG 187 Query: 181 RKKIPYFNWSFFNKSDIYRMLENDGVANRFVPETRSNPSPEEMRDMLDRHHFVYYKPSAG 240 ++ I +FNW+FFNKSD+Y L+ D A +++PET +NPSPE ++DM++RHHFVYYKPSAG Sbjct: 188 KRNIKFFNWAFFNKSDVYSQLDGDLQAGKYLPETYNNPSPERIKDMMERHHFVYYKPSAG 247 Query: 241 SLGHGIYRLTYLQKKGYFARYRKNGKNVLLRFASFDSLMRMLRSRHGNSLQSYVVQQGIR 300 SLG GIYRLTYL KKGY+ARY NG N LL+F +F SLMRML+++HG L+SYV+QQGIR Sbjct: 248 SLGLGIYRLTYLPKKGYYARYHGNGGNTLLKFPNFSSLMRMLQAKHGAKLKSYVIQQGIR 307 Query: 301 LIEIDSCPIDFRFHMHKNGSNQWVVVGIGAKKAGRGSVTTHLKNGGALLTPQQALGRVFG 360 LIEID CPIDFRFHMHKN N+W VVGIGAKKAGRGSVTTH+KNGG+L+TP+ AL R FG Sbjct: 308 LIEIDGCPIDFRFHMHKNSRNRWAVVGIGAKKAGRGSVTTHIKNGGSLMTPELALSRAFG 367 Query: 361 ARADEVLQRAKATAVKLAESLELQHRHLLGEIGFDLGIDQDEDIWMFEANAKPGRSIFRH 420 R+ EVL+RAK A+ ++E++E H HLLGEIGFD+GID +E IWMFEAN+KPGRSIF H Sbjct: 368 TRSREVLERAKEAAITMSEAIENHHPHLLGEIGFDIGIDDNERIWMFEANSKPGRSIFSH 427 Query: 421 PSLRAEGKASIEHILEHCLYLSKFRR 446 PSL+AEG+AS+EHI +H LYLS F R Sbjct: 428 PSLKAEGRASVEHIFDHSLYLSGFHR 453 >C0Z7V2.1 C0Z7V2_BREBN Putative uncharacterized protein Length = 458 Score = 285 bits (728), Expect = 9e-75, Method: Compositional matrix adjust. Identities = 158/444 (35%), Positives = 251/444 (56%), Gaps = 14/444 (3%) Query: 11 VYVSGELMKSLKLSGKKNIRLRLGKDAIPATIKPIKRA--GKHLFLASGVKSAIKIPKSG 68 + + L + L+L ++ I++ LGK + AT+ KR + + + ++S + IP G Sbjct: 19 IILPASLFQKLQLRQRQKIKVLLGKKEVVATVLQDKRNPDANVIKVTTLLQSELGIPHPG 78 Query: 69 GVYLRNLQNDEVQLGPLVGVLSDGPS-SPGNPFGSRTGFIKQLLREGSNK-CYIFAFMPR 126 + L+ L+ +++GP +G+++ G P P G RT F LL+ K + + F P Sbjct: 79 LIQLK-LEGSALRIGPSIGIVTTGIRRDPKQPIGPRTSFFHNLLQAQEGKGVFYYIFSPT 137 Query: 127 DIDWQQERVNGYFL--NASGKF--ERKLVPLPDVVYNRLPSRRAETSPYINQLRERFGR- 181 D+DW+ V +FL N SG + ++ + +PDVVY+R+PSR AE + + + R Sbjct: 138 DVDWESNTVKAWFLRRNKSGSYFWKKHVTAMPDVVYDRIPSRSAEKHEAVQEFKYRLASY 197 Query: 182 KKIPYFNWSFFNKSDIYRMLENDGVANRFVPETRSNPSPEEMRDMLDRHHFVYYKPSAGS 241 +P FN FFNK ++++L + N +PET ++PS +RD+L ++ VY KP GS Sbjct: 198 PNLPMFNQGFFNKWGVHQLLYPNPEVNEHIPETYTSPSLTTVRDLLRKYPIVYLKPKNGS 257 Query: 242 LGHGIYRLTYLQKKGYFARYRKNGKNVLLRFASFDSLMR-MLRSRHGNSLQSYVVQQGIR 300 LG+GI ++ G+ A Y NV +F+ SL + + RSR + SY+ QQGI Sbjct: 258 LGYGIVKVVRQAGGGFTASYHTGSGNVKKQFSKLSSLYQHVFRSRR---VSSYLAQQGIS 314 Query: 301 LIEIDSCPIDFRFHMHKNGSNQWVVVGIGAKKAGRGSVTTHLKNGGALLTPQQALGRVFG 360 L+ P DFR H+HKN N+WVV AK AG GSVTTH++ GG ++ L +FG Sbjct: 315 LMTFHGRPFDFRVHLHKNQQNEWVVSCTAAKVAGSGSVTTHVRTGGTVIPGDDLLQHLFG 374 Query: 361 ARADEVLQRAKATAVKLAESLELQHRHLLGEIGFDLGIDQDEDIWMFEANAKPGRSIFRH 420 + + QR +++LA ++EL LGE+G D+GID +WMFEAN+KPGRSIF+H Sbjct: 375 KQKPLMTQRISDASIRLATAIELAKGIDLGELGLDMGIDTQGHVWMFEANSKPGRSIFKH 434 Query: 421 PSLRAEGKASIEHILEHCLYLSKF 444 L+ + S + ++++ YL+ F Sbjct: 435 ARLKQADQESRKLLVDYSCYLANF 458 >C5D6K2.1 C5D6K2_9BACI Putative uncharacterized protein Length = 449 Score = 263 bits (671), Expect = 3e-68, Method: Compositional matrix adjust. Identities = 156/400 (39%), Positives = 228/400 (57%), Gaps = 15/400 (3%) Query: 50 KHLFLASGVKSAIKIPKSGGVYLRNLQNDEVQLGPLVGVLSDG-PSSPGNPFGSRTGFIK 108 KH+ + + V ++IP S ++L L D V LGPL+G+ + G SP P G R+ F Sbjct: 48 KHIVITNDVAKRLQIPFSADIHLF-LTEDTVHLGPLIGIFTAGFTKSPLRPVGKRSFFFA 106 Query: 109 QLL-REGSNKCYIFAFMPRDIDWQQERVNGYFLNASGKFERKLVPLPDVVYNRLPSRRAE 167 +LL +E + F F I W++ + GYF +G + + VP P V+YNRLP+RR E Sbjct: 107 KLLSQEKKVGGFAFVFGAHHIHWEKGTITGYFYTENGWVQHE-VPFPTVIYNRLPNRRIE 165 Query: 168 TSPYINQLRERFGRKK-IPYFNWSFFNKSDIYRMLENDGVANRFVPETRSNPSPEEMRDM 226 ++E ++ IP+FN +FFNK +IYR+LE ++ ++P T P+ E Sbjct: 166 NDETFQAIKETLKKEYGIPWFNENFFNKWEIYRLLEKHPLSRPYLPNTSFYPTIETADQF 225 Query: 227 LDRHHFVYYKPSAGSLGHGIYRLTYLQKKGYFARYR-KNGKNVLLRFASFDSLMRMLRSR 285 L R+ Y KP+ GSLG GIY L K Y R+R ++G N F + SL + S+ Sbjct: 226 LKRYGEAYLKPANGSLGLGIYHLLKKNTK-YECRFRDEHGTNRSQTFPTLSSLWENVFSQ 284 Query: 286 HGNSLQSYVVQQGIRLIEIDSCPIDFRFHMHKNGSNQWVVVGIGAKKAGRGSVTTHLKNG 345 L SY++QQGIRL+E++ DFR H +KN W V I AK A + SVTTH+ NG Sbjct: 285 --KKLDSYIIQQGIRLMEVNGRKFDFRVHTNKNEEGVWQVSAIAAKIAEKRSVTTHINNG 342 Query: 346 GALLTPQQALGRVFGARA--DEVLQRAKATAVKLAESLELQHRHLLGEIGFDLGIDQDED 403 G + T ++ +F R+ + ++++ T + L+ LE Q + +GEIGFDLGIDQ Sbjct: 343 GIVKTIEE----IFPDRSTRNHIIRQLHDTVLTLSRCLEEQLQMNIGEIGFDLGIDQQYR 398 Query: 404 IWMFEANAKPGRSIFRHPSLRAEGKASIEHILEHCLYLSK 443 IWMFEAN+KPGR IF+HP L+ + + L + +YLSK Sbjct: 399 IWMFEANSKPGRCIFKHPKLKRYDELTAMLSLAYAVYLSK 438 >A7GLN0.1 A7GLN0_BACCN Putative uncharacterized protein Length = 477 Score = 256 bits (654), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 143/378 (37%), Positives = 224/378 (59%), Gaps = 19/378 (5%) Query: 75 LQNDEVQLGPLVGVLSDG-PSSPGNPFGSR-TGFIKQLLREGSNKCYIFAFMPRDIDWQQ 132 +Q + + LGPL+G+ + G S P GSR T F L+ + + + F F P+ IDW + Sbjct: 77 MQEETIILGPLLGIFTTGFTESKMAPLGSRSTIFTDLLMPSFTLQPFAFLFGPQHIDWDE 136 Query: 133 ERVNGYFLNASGKFERKLVPLPDVVYNRLPSRRAETSPYINQLRERFGRK-KIPYFNWSF 191 E ++G F GK+E+ +P P+V+Y+RLP+R+AE+ I + ++R K IP+FN F Sbjct: 137 ETIDGLFF-LEGKWEQHTIPFPNVIYDRLPNRKAESYKPIARAKKRLQTKYTIPWFNPGF 195 Query: 192 FNKSDIYRMLENDGVANRFVPETRSNPSPEEMRDMLDRHHFVYYKPSAGSLGHGIYRLTY 251 F+K DI+++L + F+P T S E++ L + +VY KP GS G IY++ Y Sbjct: 196 FDKWDIHKLLMKEENIASFLPRTESFQHFEQVERFLSTYKYVYLKPMHGSFGRNIYQIFY 255 Query: 252 LQKKG-YFARYRKNGKNVLLRFASFDSLMRMLRSRHGNSLQSYVVQQGIRLIEIDSCPID 310 Q + Y+ RYR+N +N ++ S ++LM + S G+ L+ ++VQQGI L+ D P+D Sbjct: 256 SQTENKYYCRYRQNEQNKFRKYNSLETLMNHILS--GHDLKQFIVQQGIPLLRFDGQPMD 313 Query: 311 FRFHMHKNGSNQWVVVGIGAKKAGRGSVTTHLKNGGALLTPQQALGRVFG-----ARADE 365 FR H +KN W V I AK AGRGS+TTH+ +GG + + L +F R Sbjct: 314 FRIHTNKNHFGNWQVSTIVAKVAGRGSMTTHMNSGGNV----KLLHEIFADPTEQVRITN 369 Query: 366 VLQRAKATAVKLAESLELQHRHLLGEIGFDLGIDQDEDIWMFEANAKPGRSIFRHPSLRA 425 +L A A+ L+ L+ +GEIGFD+G+D+DE+ W+FEAN+KPGRSIF+ L+ Sbjct: 370 ILSHA---ALTLSSVLDQHILGNIGEIGFDIGLDKDENPWLFEANSKPGRSIFQEEKLKE 426 Query: 426 EGKASIEHILEHCLYLSK 443 + + + + E+ LYL++ Sbjct: 427 QSEQTRQLFYEYALYLTE 444 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.139 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,796,762,961 Number of extensions: 123858652 Number of successful extensions: 260862 Number of sequences better than 1.0e-05: 225 Number of HSP's gapped: 260013 Number of HSP's successfully gapped: 229 Length of query: 450 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 311 Effective length of database: 1,751,175,118 Effective search space: 544615461698 Effective search space used: 544615461698 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 133 (55.8 bits)