BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0352.0017.p
         (196 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KBM4.1 B3KBM4_9BACI Putative uncharacterized protein                128   3e-28
B1DDZ0.1 B1DDZ0_9BACL GCN5-related N-acetyltransferase                 75   2e-12

>B3KBM4.1 B3KBM4_9BACI Putative uncharacterized protein
          Length = 174

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 62/129 (48%), Positives = 87/129 (67%)

Query: 1   MQISSLFDSNPERWKIRLAGLLEFLREYGEKRITLRGCRVLARLTPEQLSQPGVSLLAAT 60
           M+IS L  ++PE W        EF R Y  KR+T  G + LA L+ ++L QPG S++AAT
Sbjct: 1   MEISCLSLASPEEWPHARQQCSEFFRRYSNKRLTREGYQRLASLSYDELLQPGTSIVAAT 60

Query: 61  VRGQNGRQLAGVSFVSGFGKEACLVAVHPLYRNRRTGTALLTAQLERLGTLECTVASDNA 120
           VRG  GR   G+ F + +G+ AC++AVHPLYRNR+ G++L+ +QL R G L C VA+D+ 
Sbjct: 61  VRGDIGRIPVGICFAADYGESACMIAVHPLYRNRQIGSSLIRSQLSRFGRLRCKVAADHT 120

Query: 121 ASLKMCFNT 129
           ASL+MCF+ 
Sbjct: 121 ASLQMCFHA 129


>B1DDZ0.1 B1DDZ0_9BACL GCN5-related N-acetyltransferase
          Length = 161

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/152 (32%), Positives = 70/152 (46%), Gaps = 6/152 (3%)

Query: 10  NPERWKIRLAGLLEFLREYGEKRITLRGCRVLARLTPEQLSQPGVSLLAATVRGQNGRQL 69
            PE+W      L++F   +GEKR+T+     L RL PE LSQ     + A  R   G ++
Sbjct: 7   TPEQWAKERKRLIDFAVRFGEKRLTVAAIHSLRRLPPELLSQKESETVIALAR--FGSRI 64

Query: 70  AGVSFVSGFGKEACLVAVHPLYRNRRTGTALLTAQLERLGTLECTVASDNAASLKMCF-- 127
            G+ +    G++ C++  HP  R    G A++ A +++LG L C VA DN  SL + F  
Sbjct: 65  VGLGYAEEAGEKCCIIVTHPEARGLGIGYAVMEAIMKKLGKLTCQVALDNVPSLTLFFRL 124

Query: 128 NTXXXXXXTG--GLPASRHCCSVRRCTQPACP 157
                   TG  G P  R   S      P  P
Sbjct: 125 GMKAVSMSTGPTGKPTLRFEWSQEEIMPPTSP 156


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.323    0.135    0.414 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,063,743,081
Number of extensions: 37554513
Number of successful extensions: 69886
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 69885
Number of HSP's successfully gapped: 2
Length of query: 196
Length of database: 3,060,696,203
Length adjustment: 129
Effective length of query: 67
Effective length of database: 1,845,385,268
Effective search space: 123640812956
Effective search space used: 123640812956
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 127 (53.5 bits)