BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0352.0009.p (383 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K5E0.1 B3K5E0_9BACI Glycosyl hydrolase family 88 504 e-141 B3KKC3.1 B3KKC3_9BACI Glycosyl hydrolase family 88 457 e-127 B3KHV7.1 B3KHV7_9BACI Glycosyl hydrolase family 88 437 e-120 C1ZVN3.1 C1ZVN3_RHOMR Predicted unsaturated glucuronyl hydrolase 395 e-108 C1SB21.1 C1SB21_9SPHI Predicted unsaturated glucuronyl hydrolase 364 1e-98 >B3K5E0.1 B3K5E0_9BACI Glycosyl hydrolase family 88 Length = 376 Score = 504 bits (1299), Expect = e-141, Method: Compositional matrix adjust. Identities = 235/366 (64%), Positives = 286/366 (78%) Query: 18 RWSSKIADTILERCNEQGEDEYVLERWAYVPGMLLMAMARAGVQLGRPEYVSYMERHMDT 77 RWS ADTIL + + +G + RWAYVPGM+LMA+AR G + Y+ +M+RHMD Sbjct: 6 RWSVLTADTILSQADSEGLHSEIARRWAYVPGMMLMAIARTGDCYSKDAYIDFMKRHMDL 65 Query: 78 FIGEDGSIRTYRLEEYNLDQINEGKNLFLLYQKTGEERYAKAADLLAAQLIGHPRTSEGG 137 F+ DG IR YR+EEYNLDQIN+GKNLF L + + RY KA+ LAAQLIG PRT++GG Sbjct: 66 FVQADGDIRGYRIEEYNLDQINQGKNLFALSARFHDSRYEKASHTLAAQLIGQPRTTDGG 125 Query: 138 FWHKKVYPFQMWLDGLYMASPFLAEYGKVFQRPELIDEAAHQLLLVEQRTRDPRTGLLYH 197 FWHKKVYPFQMWLDGLYM+SPFLA+Y K + RPE DE AHQLLLVE+RTRD TGLLYH Sbjct: 126 FWHKKVYPFQMWLDGLYMSSPFLAQYAKTYNRPEWFDEVAHQLLLVERRTRDRTTGLLYH 185 Query: 198 GWDESKEQEWADSSTGLSSHFWSRAMGWYAMALVDCLEHFPLAHPKRGTVIGIFQRMCGA 257 GWDE+KEQ WAD +G S H+WSRA+GWYAMALVD LE+FP+ HPKRGT++GIF+R+ A Sbjct: 186 GWDEAKEQVWADPESGRSPHYWSRALGWYAMALVDSLEYFPVDHPKRGTIMGIFERLSRA 245 Query: 258 LLEVQDKETGLWYQVLDQGGRKGNYLEASGSCMFVYALAKGLRLGYLEPSFQEAMLKGYE 317 L Q+KE+GLW+QVLDQG R+GNYLE SGS MF+YALAKG+RL YLE S + + YE Sbjct: 246 LGRYQEKESGLWFQVLDQGFREGNYLETSGSSMFIYALAKGVRLQYLEQSSRSIAERAYE 305 Query: 318 GIVEHLTEEDEHGVHLHHICHGAGLSKDRNGSYDYYISEEVLSDVPMGVAPLLLASLEVE 377 G+V+ E ++ GVHLH ICHGAGLS DRNGSY+YYI E+V+SD +GVAP +LASLE+E Sbjct: 306 GLVQRFVEVNDTGVHLHSICHGAGLSDDRNGSYEYYIGEKVVSDAQIGVAPFILASLEME 365 Query: 378 RYQADR 383 R + R Sbjct: 366 RLEDSR 371 >B3KKC3.1 B3KKC3_9BACI Glycosyl hydrolase family 88 Length = 381 Score = 457 bits (1176), Expect = e-127, Method: Compositional matrix adjust. Identities = 224/376 (59%), Positives = 277/376 (73%), Gaps = 7/376 (1%) Query: 8 KVTITEATSVRWSSKIADTILERCNEQGEDEYVLERWAYVPGMLLMAMARAGVQLGRPEY 67 +VT+ E VR +A+TIL C + G + +W YV GM L A+ R G Y Sbjct: 3 EVTVMERIPVR----VAETILSACVD-GYHPNIANKWGYVAGMALSALGRLAEWTGEERY 57 Query: 68 VSYMERHMDTFIGEDGSIRTYRLEEYNLDQINEGKNLFLLYQKTGEERYAKAADLLAAQL 127 ++RHMD FI EDG+I Y LE+YNLD IN+GKNL L++ TGEE+Y +AA+LLA+QL Sbjct: 58 NEAVKRHMDVFIQEDGTIAGYTLEDYNLDHINKGKNLLPLWRMTGEEKYRRAAELLASQL 117 Query: 128 IGHPRTSEGGFWHKKVYPFQMWLDGLYMASPFLAEYGKVFQRPELIDEAAHQLLLVEQRT 187 +G PRT EGGFWHKK+YPFQMWLDGLYM+SPF+AEY + F PE DEAA QLLL+E+RT Sbjct: 118 VGQPRTDEGGFWHKKIYPFQMWLDGLYMSSPFMAEYAETFDAPEWFDEAARQLLLIERRT 177 Query: 188 RDPRTGLLYHGWDESKEQEWADSSTGLSSHFWSRAMGWYAMALVDCLEHFPLAHPKRGTV 247 R+P+TGLL+H +DES+EQ W D TG S H W RAMGWYAMALVD LEHFP+ HP+RG + Sbjct: 178 RNPQTGLLHHAYDESREQRWCDKETGRSRHVWGRAMGWYAMALVDSLEHFPVRHPQRGQL 237 Query: 248 IGIFQRMCGALLEVQDKETGLWYQVLDQGGRKGNYLEASGSCMFVYALAKGLRLGYLEPS 307 +GIF+RM AL+ QD+++GLWYQV+D GR+GNYLEASGSCM YALAKG+RL YL Sbjct: 238 MGIFERMANALVRAQDQDSGLWYQVMDCNGRQGNYLEASGSCMLTYALAKGIRLHYLAEI 297 Query: 308 FQEAMLKGYEGIVEHLTEEDEHGVHLHHICHGAGLS--KDRNGSYDYYISEEVLSDVPMG 365 + + Y+GI E D G+HLH ICHGAGL K R+GSY+YY+SE+V+SD MG Sbjct: 298 DIGVVERAYDGIKERFLTADAEGLHLHGICHGAGLGGRKYRDGSYEYYLSEKVVSDSLMG 357 Query: 366 VAPLLLASLEVERYQA 381 VAPLLLAS+EVER QA Sbjct: 358 VAPLLLASIEVERLQA 373 >B3KHV7.1 B3KHV7_9BACI Glycosyl hydrolase family 88 Length = 374 Score = 437 bits (1123), Expect = e-120, Method: Compositional matrix adjust. Identities = 218/363 (60%), Positives = 265/363 (73%), Gaps = 3/363 (0%) Query: 19 WSSKIADTILERCNEQGEDEYVLERWAYVPGMLLMAMARAGVQLGRPEYVSYMERHMDTF 78 WS + AD IL+ + +G + ++WAYV GM L A R +Y +++ +M Sbjct: 7 WSVRTADYILQNASPEGYHPRLEKKWAYVTGMTLKAFERVWELTVDSKYFDFIKLNMSRH 66 Query: 79 IGEDGSIRTYRLEEYNLDQINEGKNLFLLYQKTGEERYAKAADLLAAQLIGHPRTSEGGF 138 I DG+I Y LE+YNLD IN+GK L+L+ ++TG+ + KA +LLA QL G PRTS+GGF Sbjct: 67 IHADGTIEQYVLEDYNLDNINQGKLLYLMLRQTGDPCFEKAINLLADQLKGQPRTSDGGF 126 Query: 139 WHKKVYPFQMWLDGLYMASPFLAEYGKVFQRPELIDEAAHQLLLVEQRTRDPRTGLLYHG 198 WHKK YPFQMWLDGLYMASPF+AEY VF RPE D AHQLL VE+ TRD +GLLYHG Sbjct: 127 WHKKRYPFQMWLDGLYMASPFMAEYALVFDRPEWFDVTAHQLLTVERHTRDRNSGLLYHG 186 Query: 199 WDESKEQEWADSSTGLSSHFWSRAMGWYAMALVDCLEHFPLAHPKRGTVIGIFQRMCGAL 258 WDE+ EQ WA+ STG S HFWSRAMGWYAMAL D LE+FP H RG + GIF+RM GAL Sbjct: 187 WDETCEQAWANPSTGKSPHFWSRAMGWYAMALADTLEYFPRDHAMRGQLCGIFERMAGAL 246 Query: 259 LEVQDKETGLWYQVLDQGGRKGNYLEASGSCMFVYALAKGLRLGYLEPSFQEAMLKGYEG 318 ++VQDKE+GLWYQVLDQGGRKGNYLEAS S MF+YALAKG+RL YL F A +GYEG Sbjct: 247 VKVQDKESGLWYQVLDQGGRKGNYLEASSSGMFIYALAKGVRLHYLTKGFASAAKRGYEG 306 Query: 319 IVEHLTE-EDEHGVHLHHICHGAGLSKD--RNGSYDYYISEEVLSDVPMGVAPLLLASLE 375 +++ L E +DE GVHL IC GAGL D R+GSY+YY+SE V+ D MGVAP +LAS E Sbjct: 307 MLDRLIELDDEGGVHLTKICAGAGLGGDPYRDGSYEYYLSEPVVQDSMMGVAPFILASTE 366 Query: 376 VER 378 +ER Sbjct: 367 IER 369 >C1ZVN3.1 C1ZVN3_RHOMR Predicted unsaturated glucuronyl hydrolase Length = 393 Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust. Identities = 198/373 (53%), Positives = 251/373 (67%), Gaps = 10/373 (2%) Query: 12 TEATSVR-WSSKIADTILERCNEQGEDEYVLERWAYVPGMLLMAMARAGVQLGRPEYVSY 70 ++ VR WS ++A++ + + + ERW Y G++L A + G Y Y Sbjct: 22 AQSPDVRPWSVRMAESAMR------QKPLLSERWHYEVGVVLRAFEALWYRTGDARYFEY 75 Query: 71 MERHMDTFIGEDGSIRTYRLEEYNLDQINEGKNLFLLYQKTGEERYAKAADLLAAQLIGH 130 + ++D F+ +G+IRTY EEYNLDQIN GK LFLLY++TGEERY +A D L QL H Sbjct: 76 IRTNIDRFVTPEGAIRTYEKEEYNLDQINTGKLLFLLYEQTGEERYRRAIDTLRDQLRHH 135 Query: 131 PRTSEGGFWHKKVYPFQMWLDGLYMASPFLAEYGKVFQRPELIDEAAHQLLLVEQRTRDP 190 PRTSEGGFWHKK+YP+Q+WLDG+YM PFL YG F E +DE H++LLV + RDP Sbjct: 136 PRTSEGGFWHKKIYPYQLWLDGVYMMGPFLVRYGVTFGDAEALDETTHEILLVARYLRDP 195 Query: 191 RTGLLYHGWDESKEQEWADSSTGLSSHFWSRAMGWYAMALVDCLEHFPLAHPKRGTVIGI 250 RTGL YHGWDE ++Q WADS TG S++FW R MGWYAMALVD L+ P HP R T+I I Sbjct: 196 RTGLYYHGWDEKRQQIWADSITGRSANFWGRGMGWYAMALVDVLDWLPADHPDRPTIIRI 255 Query: 251 FQRMCGALLEVQDKETGLWYQVLDQGGRKGNYLEASGSCMFVYALAKGLRLGYLEPSFQE 310 Q + A+ VQD TGLWYQVLDQ GNYLEAS S MFVYALAKG+R GYL + E Sbjct: 256 LQDLAEAVARVQDPVTGLWYQVLDQPAYSGNYLEASASSMFVYALAKGVRKGYLSAKYLE 315 Query: 311 AMLKGYEGIVEHLTEEDEHG-VHLHHICHGAGL--SKDRNGSYDYYISEEVLSDVPMGVA 367 +GY G+V+HL D G VHL+ IC AGL + R+GS +YY+SE ++SD P GV Sbjct: 316 VARRGYRGLVKHLVSVDPDGTVHLNQICAVAGLGGPRQRDGSIEYYLSEPIVSDDPKGVG 375 Query: 368 PLLLASLEVERYQ 380 P +LASLE+E ++ Sbjct: 376 PFILASLEIEAFE 388 >C1SB21.1 C1SB21_9SPHI Predicted unsaturated glucuronyl hydrolase Length = 629 Score = 364 bits (934), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 180/362 (49%), Positives = 239/362 (66%), Gaps = 3/362 (0%) Query: 20 SSKIADTILERCNEQGEDEYVLERWAYVPGMLLMAMARAGVQLGRPEYVSYMERHMDTFI 79 S+K+A+T++ + + W Y G++L G Y +++ +D +I Sbjct: 19 SAKMAETMIRIWGDSLQLAGRNAHWTYDQGVVLEGFTGLWKNTGDGRYFKFIQTGLDHYI 78 Query: 80 GEDGSIRTYRLEEYNLDQINEGKNLFLLYQKTGEERYAKAADLLAAQLIGHPRTSEGGFW 139 +DG+IRTY+ E+YN+D I G++L LLY+ T EE+Y AAD L AQL PRT EGGFW Sbjct: 79 EKDGTIRTYKAEDYNIDNIKNGRSLLLLYKVTNEEKYKLAADKLKAQLDKMPRTKEGGFW 138 Query: 140 HKKVYPFQMWLDGLYMASPFLAEYGKVFQRPELIDEAAHQLLLVEQRTRDPRTGLLYHGW 199 HKK YPFQMWLDGLYMA PF AEY ++ + Q +L+E+ +RD +TGLLYHG+ Sbjct: 139 HKKRYPFQMWLDGLYMAEPFYAEYAAMYHDETAFKDITRQFVLMEEHSRDNKTGLLYHGY 198 Query: 200 DESKEQEWADSSTGLSSHFWSRAMGWYAMALVDCLEHFPLAHPKRGTVIGIFQRMCGALL 259 DES+EQ WAD +TG S +FW RAMGWY MALVD LE++P HP R +++ I RM A+ Sbjct: 199 DESREQRWADKTTGRSPNFWGRAMGWYGMALVDALEYYPAGHPGRDSLLKILNRMAVAVK 258 Query: 260 EVQDKETGLWYQVLDQGGRKGNYLEASGSCMFVYALAKGLRLGYLEPSFQEAMLKGYEGI 319 + QD +G WYQVLD+ G KGNYLEASGSCMFVYALAKG+RLGYL S++ KGY+GI Sbjct: 259 KYQDPASGCWYQVLDKAGSKGNYLEASGSCMFVYALAKGIRLGYLPASYRTVAEKGYKGI 318 Query: 320 VEHLTEE-DEHGVHLHHICHGAGLSKD--RNGSYDYYISEEVLSDVPMGVAPLLLASLEV 376 + E GV+L AGL D R+GSY YY+SE+V+++ P GV +LAS E+ Sbjct: 319 TKQFVRTAPEGGVNLEGTVSVAGLGGDPYRDGSYAYYLSEKVVTNDPKGVGAYMLASNEM 378 Query: 377 ER 378 E+ Sbjct: 379 EQ 380 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.421 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,449,899,828 Number of extensions: 107608479 Number of successful extensions: 241792 Number of sequences better than 1.0e-05: 335 Number of HSP's gapped: 241180 Number of HSP's successfully gapped: 335 Length of query: 383 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 246 Effective length of database: 1,770,017,148 Effective search space: 435424218408 Effective search space used: 435424218408 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 132 (55.5 bits)