BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0351.0006.p (207 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q2BCM1.1 Q2BCM1_9BACI Putative uncharacterized protein 217 5e-55 Q9KE71.1 Q9KE71_BACHD BH0986 protein 204 3e-51 B1HYW4.1 B1HYW4_LYSSC Putative Nudix hydrolase EC=3.6.-.- 171 3e-41 A3I6L2.1 A3I6L2_9BACI Putative uncharacterized protein 170 9e-41 B4AIC8.1 B4AIC8_BACPU Putative uncharacterized protein 155 3e-36 >Q2BCM1.1 Q2BCM1_9BACI Putative uncharacterized protein Length = 209 Score = 217 bits (552), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 103/202 (50%), Positives = 138/202 (68%) Query: 1 MNEELLATFDEQGNRTGAAPRDEVHRLGLWHETFHCWFVRRDAGGLMIYLQLRSLHKRDY 60 M ELL FD++GN+ G A R +VHR G WHE FHCWF++R+ + IY+QLRS K+DY Sbjct: 1 MELELLKIFDDEGNQIGTATRKDVHRQGFWHEAFHCWFIQREEDKVYIYVQLRSKEKKDY 60 Query: 61 AGLLDITAAGHLLADETVVDGVCEVQEELGIAVDFDQLKPLGVIPYQMDTAGFIDRERAH 120 LLDITAAGHLLA+ETV DGV E++EE+GI VD ++L PLG I Y ++ FID+E A+ Sbjct: 61 PDLLDITAAGHLLAEETVEDGVREIKEEIGIDVDIEELSPLGTIRYCIEKENFIDKEMAN 120 Query: 121 VFVYENHYALSEFTPQQEEVAGIVQARFADFRSFITGGSSKLHVEGFRVEGDGERIVLDE 180 VF+YE SE+ QQEEVAGI + + F+ G K+ +EGF + GE+I L++ Sbjct: 121 VFLYECSQPFSEYELQQEEVAGIYRIEWDSFKKLWEGEDGKVQMEGFEIGSAGEKIYLEK 180 Query: 181 QVEFSQLVPHEREYYMRVIEGI 202 + + VPH+R YY VI+GI Sbjct: 181 EADIGDFVPHDRSYYQEVIKGI 202 >Q9KE71.1 Q9KE71_BACHD BH0986 protein Length = 208 Score = 204 bits (520), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 102/203 (50%), Positives = 135/203 (66%) Query: 1 MNEELLATFDEQGNRTGAAPRDEVHRLGLWHETFHCWFVRRDAGGLMIYLQLRSLHKRDY 60 M E L FDE GN G A R+EVH GLWHETFHCWF+ ++ +YLQ+RS K+DY Sbjct: 1 MESERLKIFDEDGNPIGVATREEVHARGLWHETFHCWFMTKEDDTHYLYLQIRSELKKDY 60 Query: 61 AGLLDITAAGHLLADETVVDGVCEVQEELGIAVDFDQLKPLGVIPYQMDTAGFIDRERAH 120 LLDIT AGHLLA+ETV DGV EV EE GIAV F+ LKPLG++ Y + ID+ERAH Sbjct: 61 PNLLDITVAGHLLANETVQDGVREVYEETGIAVSFEVLKPLGIMKYSVTREKLIDQERAH 120 Query: 121 VFVYENHYALSEFTPQQEEVAGIVQARFADFRSFITGGSSKLHVEGFRVEGDGERIVLDE 180 VF+Y++ ++F Q+EEVAG+V+ RFADF F ++ +EGF+ GE++ + E Sbjct: 121 VFLYQDGITFTDFRLQREEVAGMVRVRFADFYMFCLREKEEVVIEGFKQNESGEKMPVLE 180 Query: 181 QVEFSQLVPHEREYYMRVIEGIE 203 +V + VPHE +Y V+ I+ Sbjct: 181 KVGWEHFVPHEPSFYEEVVNRID 203 >B1HYW4.1 B1HYW4_LYSSC Putative Nudix hydrolase EC=3.6.-.- Length = 207 Score = 171 bits (434), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 123/200 (61%), Gaps = 4/200 (2%) Query: 1 MNEELLATFDEQGNRTGAAPRDEVHRLGLWHETFHCWFVRRDAGGLMIYLQLRSLHKRDY 60 M +E++ F+E+ G A R EVH GLWHETFHCW V D IY Q+RS K+DY Sbjct: 1 MEQEIVKVFNERHEEIGTATRSEVHEKGLWHETFHCWLVNED----YIYFQVRSSQKKDY 56 Query: 61 AGLLDITAAGHLLADETVVDGVCEVQEELGIAVDFDQLKPLGVIPYQMDTAGFIDRERAH 120 GLLDITAAGHLLA ETV G+ EV+EELG+ +D + + +G+ + + ID E H Sbjct: 57 PGLLDITAAGHLLAVETVESGIREVKEELGLQIDVEDVVKMGMTSCSIVSENMIDNEFCH 116 Query: 121 VFVYENHYALSEFTPQQEEVAGIVQARFADFRSFITGGSSKLHVEGFRVEGDGERIVLDE 180 V++Y + + FT Q EEV+G+V+AR + +F G ++ L++EG+ DG+R+ + Sbjct: 117 VYIYPFEHDWNSFTLQYEEVSGVVRARLNEAEAFFLGKTTTLNIEGYEYFPDGQRVKIVR 176 Query: 181 QVEFSQLVPHEREYYMRVIE 200 V +Q VP+ Y VI+ Sbjct: 177 PVGTAQFVPYRELYVAHVIK 196 >A3I6L2.1 A3I6L2_9BACI Putative uncharacterized protein Length = 207 Score = 170 bits (430), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 121/200 (60%), Gaps = 4/200 (2%) Query: 1 MNEELLATFDEQGNRTGAAPRDEVHRLGLWHETFHCWFVRRDAGGLMIYLQLRSLHKRDY 60 M +E++ F+EQ G A R EVH GLWHETFHCW V D IY Q+RS K+DY Sbjct: 1 MEQEIVKVFNEQHEEIGTATRSEVHEKGLWHETFHCWLVNED----YIYFQVRSSQKKDY 56 Query: 61 AGLLDITAAGHLLADETVVDGVCEVQEELGIAVDFDQLKPLGVIPYQMDTAGFIDRERAH 120 GLLDITAAGHLLA ETV G+ EV+EELG+ +D + +G+ + + ID E H Sbjct: 57 PGLLDITAAGHLLAVETVESGIREVKEELGLQIDVQDVVKMGMTSCSIVSENMIDNEFCH 116 Query: 121 VFVYENHYALSEFTPQQEEVAGIVQARFADFRSFITGGSSKLHVEGFRVEGDGERIVLDE 180 V++Y + + F Q EEV+G+V+AR + +F G ++ L++EG+ DG+R+ + Sbjct: 117 VYIYPFEHDWNSFALQYEEVSGVVRARLNEAEAFFLGETTTLNIEGYEYFPDGQRVKIVR 176 Query: 181 QVEFSQLVPHEREYYMRVIE 200 V +Q VP+ Y VI+ Sbjct: 177 PVGTAQFVPYRELYVAHVIK 196 >B4AIC8.1 B4AIC8_BACPU Putative uncharacterized protein Length = 208 Score = 155 bits (391), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 81/202 (40%), Positives = 114/202 (56%) Query: 1 MNEELLATFDEQGNRTGAAPRDEVHRLGLWHETFHCWFVRRDAGGLMIYLQLRSLHKRDY 60 M +E L +EQ G A R ++H GLWHETFH W ++++ + +Y QLRS K+++ Sbjct: 1 MEQEKLNILNEQHETIGVAARSDIHAQGLWHETFHFWLLKKEHDTIYLYFQLRSPAKKNF 60 Query: 61 AGLLDITAAGHLLADETVVDGVCEVQEELGIAVDFDQLKPLGVIPYQMDTAGFIDRERAH 120 L DITAAGHLLA+E DGV EV+EELG+ V F+ L GVI ++ F DRE H Sbjct: 61 PSLFDITAAGHLLANEQPSDGVREVEEELGLTVPFEDLAFAGVIQDEIHLPSFTDRECCH 120 Query: 121 VFVYENHYALSEFTPQQEEVAGIVQARFADFRSFITGGSSKLHVEGFRVEGDGERIVLDE 180 V++Y + Q+EEVAG+ +A+ D + T + ++GF V+ GER Sbjct: 121 VYLYVHQEEQMNIQLQKEEVAGVYRAKLMDAQQLFTRKYENMQLDGFGVDEFGERREKSR 180 Query: 181 QVEFSQLVPHEREYYMRVIEGI 202 V VPHE YY + + I Sbjct: 181 VVCIQDFVPHEPSYYQHLFQAI 202 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.141 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,283,104,711 Number of extensions: 53185908 Number of successful extensions: 100138 Number of sequences better than 1.0e-05: 143 Number of HSP's gapped: 100028 Number of HSP's successfully gapped: 143 Length of query: 207 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 78 Effective length of database: 1,845,385,268 Effective search space: 143940050904 Effective search space used: 143940050904 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 128 (53.9 bits)