BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0351.0005.p (678 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K544.1 B3K544_9BACI Beta-galactosidase EC=3.2.1.23 930 0.0 Q45093.1 Q45093_BACCI Beta-D-galactosidase 916 0.0 Q65NG1.1 Q65NG1_BACLD Putative uncharacterized protein 890 0.0 B1D713.1 B1D713_9BACL Beta-galactosidase EC=3.2.1.23 881 0.0 A9BHE4.1 A9BHE4_PETMO Beta-galactosidase EC=3.2.1.23 861 0.0 >B3K544.1 B3K544_9BACI Beta-galactosidase EC=3.2.1.23 Length = 690 Score = 930 bits (2404), Expect = 0.0, Method: Compositional matrix adjust. Identities = 440/677 (64%), Positives = 533/677 (78%), Gaps = 5/677 (0%) Query: 1 MLHGADYNPEQWLKYPEVLREDIRMMKLANCNVMSVGIFSWVSLEPEEGVFTFDWLDSVL 60 MLHGADYNPEQWL+YPEVL EDIR+MKLANCNVMSVGIFSWVSLEPEEGVFTFDWLD VL Sbjct: 15 MLHGADYNPEQWLRYPEVLEEDIRLMKLANCNVMSVGIFSWVSLEPEEGVFTFDWLDGVL 74 Query: 61 NTFAENGIYAFLATPSGARPAWMSEKYPXXXXXXXXXXXXXHGVRHNHCYTSPVYREKTA 120 + FA+NGIYAFLATPSGARPAWMSEKYP HG RHNHCYTSPVYREK Sbjct: 75 DRFADNGIYAFLATPSGARPAWMSEKYPEVLRVSERRVRNLHGFRHNHCYTSPVYREKVH 134 Query: 121 LLNGKLAERYANHPAVIGWHISNEYGGECHCDLCQASFRDWLKVKYNNSLDEMNHAWWAT 180 +N KLAERY NHPAVIGWHISNE+GG+CHCD CQ +FR WL+ KY +LD++NHAWW Sbjct: 135 TINRKLAERYGNHPAVIGWHISNEFGGDCHCDYCQDAFRSWLQAKYA-TLDDLNHAWWTA 193 Query: 181 FWSHTYTSWNQVESPAPHGETQVHGLNLDWRRFVSESMIDFCQHEIDSVREYNPELPVTT 240 FWSHT T+W+QVESP+PHGETQVHG+NLDWRRFV++ DF +HE + +R NP LPVTT Sbjct: 194 FWSHTITNWSQVESPSPHGETQVHGMNLDWRRFVTDQTADFIRHETEPLRRVNPSLPVTT 253 Query: 241 N-MHNIDGVDYRKLAKILDVVSWDAYPDWGYTEDNDDARLAAWTAMHHDMYRTFKH-KPF 298 N M +G++Y K A +LDVVSWD+YP W + + D+A A+ AM HD+ R+ K +P+ Sbjct: 254 NLMEYFEGLNYWKFADLLDVVSWDSYPTW-HDQGGDEAAQASRVAMMHDIVRSIKGGQPW 312 Query: 299 LLMESTPSLTNWQSVSKLKRPGMHKLSSLQAVAHGSDSVQYFQWRKSRGSSEKFHGAVID 358 +LMESTPSLTNWQ VSKLKRPGMH LSS+QAVAHGSD+VQYFQWRKSRGSSEK HGAV+D Sbjct: 313 MLMESTPSLTNWQPVSKLKRPGMHLLSSMQAVAHGSDTVQYFQWRKSRGSSEKLHGAVVD 372 Query: 359 HSGHAETRVFRDVAEVGRTLAELQDVVGTTTPVQTAIIYDWDNRWAIKDAQGIRNSGLKY 418 H GH TRVF DVAEVG L ++ VVGT P + A+I+DW+NRWAI DAQG RN G+KY Sbjct: 373 HVGHEHTRVFGDVAEVGDYLNKMDAVVGTGIPAEAAVIFDWENRWAINDAQGPRNKGVKY 432 Query: 419 EETVLQHYQALWELGIPVDIIGSEEDFSAYKLVIAPMLYLISEDNGKRIEKYVEQGGTFL 478 EETV +HY+ALW+ G+P+D+I E+DFS YKLV+APMLY++ G+RI+++VE GGTF+ Sbjct: 433 EETVQEHYRALWKQGVPMDVIDMEQDFSGYKLVVAPMLYMVRPGVGERIQQFVEAGGTFV 492 Query: 479 GTYWSGVVGETDLCHLGGFPGPLRRTLGIWAEETEGLHSRDLNGLVMDPGNSLKLSGEYD 538 TYWSG+V E DLC LGGFPGPLR+TLGIW+EE + LH D+NG+V + G L L+ Y+ Sbjct: 493 ATYWSGIVDEFDLCFLGGFPGPLRKTLGIWSEEIDALHDHDVNGIVTNDGGGLGLAEAYE 552 Query: 539 AHEIAELIHLEGAEALGHYRSDFYAGRPALTVNKLGAGKAYHLATRVKDLQFYVDLYAAI 598 A E+ +LIHLE AEAL YRSDFYAGRPALTVN+LG G+AY++A+R K+ F+ D Y + Sbjct: 553 AVELCDLIHLETAEALAVYRSDFYAGRPALTVNQLGKGRAYYIASRNKE-PFHSDFYRKL 611 Query: 599 AGKERISRTLNSELPVGVTAQLRTDGEHDYVFVQNFSGAEQVVTLDGREYTDVESGAAAP 658 + + R L ELP GV++ +RTDGE DY+FV NFSG + VTLDG +Y D S A Sbjct: 612 VEQTGVRRALPMELPSGVSSSIRTDGESDYIFVMNFSGEAKRVTLDGADYRDFISCEAQG 671 Query: 659 SELKLAVNGLAILKRGA 675 +EL+LA G+ ++K+GA Sbjct: 672 AELELAPYGVKVIKKGA 688 >Q45093.1 Q45093_BACCI Beta-D-galactosidase Length = 690 Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust. Identities = 431/676 (63%), Positives = 522/676 (77%), Gaps = 6/676 (0%) Query: 1 MLHGADYNPEQWLKYPEVLREDIRMMKLANCNVMSVGIFSWVSLEPEEGVFTFDWLDSVL 60 MLHGADYNPEQWL+YPEVL EDIR+MKLA CNVMS+GIFSWVSLEPEEGV+TF+WLD VL Sbjct: 15 MLHGADYNPEQWLRYPEVLEEDIRLMKLAKCNVMSIGIFSWVSLEPEEGVYTFEWLDQVL 74 Query: 61 NTFAENGIYAFLATPSGARPAWMSEKYPXXXXXXXXXXXXXHGVRHNHCYTSPVYREKTA 120 + FA NGIYAFLATPSGARPAWMS KYP HG RHNHCYTSPVYREK Sbjct: 75 DRFAANGIYAFLATPSGARPAWMSAKYPEVLRVGANRVRNLHGFRHNHCYTSPVYREKVT 134 Query: 121 LLNGKLAERYANHPAVIGWHISNEYGGECHCDLCQASFRDWLKVKYNNSLDEMNHAWWAT 180 +N KLAERY++HPAVIGWHISNE+GG+CHCD CQ +FR W+K KY +LDE+NH+WW T Sbjct: 135 AINTKLAERYSDHPAVIGWHISNEFGGDCHCDYCQDAFRGWVKNKYG-TLDELNHSWWTT 193 Query: 181 FWSHTYTSWNQVESPAPHGETQVHGLNLDWRRFVSESMIDFCQHEIDSVREYNPELPVTT 240 FWSHT T W+QVESPAPHGETQVH +NLDWRRFV++ DF HE ++ NP+LPVTT Sbjct: 194 FWSHTVTDWSQVESPAPHGETQVHAMNLDWRRFVTDQTADFIVHETKPLKAKNPDLPVTT 253 Query: 241 N-MHNIDGVDYRKLAKILDVVSWDAYPDWGYTEDNDDARLAAWTAMHHDMYRTFKH-KPF 298 N M +G++Y K A ILD +SWD+YP W ++ D +LA+ AM HD+ R+ K +PF Sbjct: 254 NLMEFYEGLNYWKFADILDFLSWDSYPTWHDADEED--KLASRIAMMHDIVRSIKGGQPF 311 Query: 299 LLMESTPSLTNWQSVSKLKRPGMHKLSSLQAVAHGSDSVQYFQWRKSRGSSEKFHGAVID 358 LLMESTPS TNWQ VSKLK+PGMH LSSLQAVAHGSDSVQYFQWRKSRGSSEK HGAV+D Sbjct: 312 LLMESTPSSTNWQEVSKLKKPGMHLLSSLQAVAHGSDSVQYFQWRKSRGSSEKLHGAVVD 371 Query: 359 HSGHAETRVFRDVAEVGRTLAELQDVVGTTTPVQTAIIYDWDNRWAIKDAQGIRNSGLKY 418 H G TRVF+DV +VG L ++ +VGT+ P + II+DW+NRWA+ D+QG RN G+KY Sbjct: 372 HVGTEHTRVFQDVTDVGTALEGMEAIVGTSVPAEVGIIFDWENRWAVNDSQGPRNIGVKY 431 Query: 419 EETVLQHYQALWELGIPVDIIGSEEDFSAYKLVIAPMLYLISEDNGKRIEKYVEQGGTFL 478 E+TV HY+A W+ G+ VD+I + D S YKL++APMLYL+ E G+RIE++VE GGTF+ Sbjct: 432 EQTVEAHYEAFWKKGVAVDVIDMDADLSKYKLLVAPMLYLVREGVGERIEQFVENGGTFV 491 Query: 479 GTYWSGVVGETDLCHLGGFPGPLRRTLGIWAEETEGLHSRDLNGLVMDPGNSLKLSGEYD 538 TYWSG+V E DLC LGGFPGPLR+TLGIW+EE +GLH RDLNG++ GN+L+L+ EYD Sbjct: 492 ATYWSGIVNENDLCFLGGFPGPLRKTLGIWSEEIDGLHDRDLNGVIPVKGNALQLNAEYD 551 Query: 539 AHEIAELIHLEGAEALGHYRSDFYAGRPALTVNKLGAGKAYHLATRVKDLQFYVDLYAAI 598 A E+ +LIHLEGAEAL YRSDFYAGRPALTVN+LGAGKAY++ATR K FY D Y ++ Sbjct: 552 AIELCDLIHLEGAEALATYRSDFYAGRPALTVNRLGAGKAYYIATRTK-APFYDDFYGSL 610 Query: 599 AGKERISRTLNSELPVGVTAQLRTDGEHDYVFVQNFSGAEQVVTLDGREYTDVESGAAAP 658 I R L ++LP GVTA +RTDG DYVFVQN++ + V LD + Y+D+ SG Sbjct: 611 IADLGIERALETQLPAGVTAHIRTDGTADYVFVQNYTPETKQVQLDEQSYSDLLSGDMME 670 Query: 659 SELKLAVNGLAILKRG 674 L+L + +L+R Sbjct: 671 GSLELQPYDIQVLRRA 686 >Q65NG1.1 Q65NG1_BACLD Putative uncharacterized protein Length = 690 Score = 890 bits (2299), Expect = 0.0, Method: Compositional matrix adjust. Identities = 421/675 (62%), Positives = 513/675 (76%), Gaps = 5/675 (0%) Query: 1 MLHGADYNPEQWLKYPEVLREDIRMMKLANCNVMSVGIFSWVSLEPEEGVFTFDWLDSVL 60 +LHGADYNP+QWLKYP+VL+EDIR+MKL+ CNVMSVGIFSWVSLEPEEG FTFDW D VL Sbjct: 15 LLHGADYNPDQWLKYPDVLKEDIRLMKLSRCNVMSVGIFSWVSLEPEEGRFTFDWFDQVL 74 Query: 61 NTFAENGIYAFLATPSGARPAWMSEKYPXXXXXXXXXXXXXHGVRHNHCYTSPVYREKTA 120 +TF ENGIYAFLATPSGARPAWMS+KYP HG RHNHCYTSPVYR KTA Sbjct: 75 DTFKENGIYAFLATPSGARPAWMSKKYPEVLRTERNRVRNLHGKRHNHCYTSPVYRRKTA 134 Query: 121 LLNGKLAERYANHPAVIGWHISNEYGGECHCDLCQASFRDWLKVKYNNSLDEMNHAWWAT 180 ++NGKLAERYA+HPAVIGWHISNEYGGECHC+LCQ FR+WL K+ +LD +N AWW + Sbjct: 135 IINGKLAERYAHHPAVIGWHISNEYGGECHCELCQDKFREWLLAKFK-TLDRLNDAWWTS 193 Query: 181 FWSHTYTSWNQVESPAPHGETQVHGLNLDWRRFVSESMIDFCQHEIDSVREYNPELPVTT 240 FWSHTYT W+++ESPAPHGE VHGLNLDW+RFV++ +DFC+HEI VR +NP+LPVTT Sbjct: 194 FWSHTYTDWDEIESPAPHGEDAVHGLNLDWKRFVTDQTVDFCRHEIAHVRSFNPDLPVTT 253 Query: 241 N-MHNIDGVDYRKLAKILDVVSWDAYPDWGYTEDNDDARLAAWTAMHHDMYRTFKH-KPF 298 N M G++Y K A +LDV+SWD+YP W + +D+RL A A HD+ R+ K +PF Sbjct: 254 NFMGTYAGLNYWKFADLLDVISWDSYPAW-HNSRQEDSRLGADIAFVHDINRSLKGGRPF 312 Query: 299 LLMESTPSLTNWQSVSKLKRPGMHKLSSLQAVAHGSDSVQYFQWRKSRGSSEKFHGAVID 358 +LMESTPS+TNWQ VSKLKRPGMH+LSSLQAVAHGSD+VQYFQWRKSRGSSEKFHGAV+D Sbjct: 313 MLMESTPSMTNWQDVSKLKRPGMHELSSLQAVAHGSDTVQYFQWRKSRGSSEKFHGAVVD 372 Query: 359 HSGHAETRVFRDVAEVGRTLAELQDVVGTTTPVQTAIIYDWDNRWAIKDAQGIRNSGLKY 418 H G TRVF++V ++G L +L+DV GTT + AII+DW+NRWA++DAQG RN G Y Sbjct: 373 HEGSEHTRVFQEVKKLGEKLEKLEDVAGTTVEPEAAIIFDWENRWALEDAQGPRNIGKHY 432 Query: 419 EETVLQHYQALWELGIPVDIIGSEEDFSAYKLVIAPMLYLISEDNGKRIEKYVEQGGTFL 478 E T Y+ W G+PVD+I E DFS YKL++APMLY++ E +RIE++V+ GGTF+ Sbjct: 433 ERTAKSFYEPFWREGVPVDVIHMEADFSRYKLLVAPMLYMLREGTAERIEQFVQNGGTFV 492 Query: 479 GTYWSGVVGETDLCHLGGFPGPLRRTLGIWAEETEGLHSRDLNGLVMDPGNSLKLSGEYD 538 TYWSG+V E +L LGGFPG LR+TLGIW+EE + LH N +VMD N L LSG Y+ Sbjct: 493 ATYWSGIVDENELTFLGGFPGGLRKTLGIWSEEIDALHDGQKNTIVMDEENRLGLSGSYE 552 Query: 539 AHEIAELIHLEGAEALGHYRSDFYAGRPALTVNKLGAGKAYHLATRVKDLQFYVDLYAAI 598 A E+ +LIHLEGAEAL Y DFYAGRPALTVN G GKAY++A+R + F + + Sbjct: 553 ASELCDLIHLEGAEALAAYEDDFYAGRPALTVNLFGDGKAYYIASR-NEAAFQEAFISRL 611 Query: 599 AGKERISRTLNSELPVGVTAQLRTDGEHDYVFVQNFSGAEQVVTLDGREYTDVESGAAAP 658 + I++ L++ELP GVTAQLRTDG HDY+FV NF+ + V+L TDV G Sbjct: 612 IEECGIAKVLDTELPKGVTAQLRTDGRHDYIFVMNFTAENRSVSLPEETNTDVLKGTRKK 671 Query: 659 SELKLAVNGLAILKR 673 LKL G +IL+R Sbjct: 672 GALKLPPYGTSILRR 686 >B1D713.1 B1D713_9BACL Beta-galactosidase EC=3.2.1.23 Length = 691 Score = 881 bits (2276), Expect = 0.0, Method: Compositional matrix adjust. Identities = 405/677 (59%), Positives = 527/677 (77%), Gaps = 6/677 (0%) Query: 1 MLHGADYNPEQWLKYPEVLREDIRMMKLANCNVMSVGIFSWVSLEPEEGVFTFDWLDSVL 60 MLHGADYNP+QWL YP VL EDIR+MKL++ NVMSVGIFSW + EPEEGV+TF+W+D ++ Sbjct: 15 MLHGADYNPDQWLDYPHVLEEDIRLMKLSSSNVMSVGIFSWAAYEPEEGVYTFEWMDQLI 74 Query: 61 NTFAENGIYAFLATPSGARPAWMSEKYPXXXXXXXXXXXXXHGVRHNHCYTSPVYREKTA 120 + FA NGIYA LATPSGARPAWMSEKYP HG RHNHC++SPVYR K Sbjct: 75 DRFAANGIYALLATPSGARPAWMSEKYPEVLRVEENGIRNMHGARHNHCFSSPVYRAKVK 134 Query: 121 LLNGKLAERYANHPAVIGWHISNEYGGECHCDLCQASFRDWLKVKYNNSLDEMNHAWWAT 180 +NGKLAERY+ HPAVIGWHISNEY GECHC+ C+ +F++WL+ +Y +++ +NHAWW T Sbjct: 135 EMNGKLAERYSQHPAVIGWHISNEYSGECHCNYCREAFQNWLEKRYG-TIEALNHAWWTT 193 Query: 181 FWSHTYTSWNQVESPAPHGETQVHGLNLDWRRFVSESMIDFCQHEIDSVREYNPELPVTT 240 FW+H YTS++Q+++P GE VHG+N+DWRRFV++ +DFC++E++ +R NPELP+TT Sbjct: 194 FWAHKYTSFSQIDTPTYRGEKAVHGMNVDWRRFVTDQTVDFCRNEMEPLRGINPELPITT 253 Query: 241 N-MHNIDGVDYRKLAKILDVVSWDAYPDWGYTEDNDDARLAAWTAMHHDMYRTFKH-KPF 298 N M + + ++Y K +++LDV+SWDAYP W + D + LAAW +HD++R+ K KPF Sbjct: 254 NFMLDFEPLNYWKFSELLDVISWDAYPTW--HDAKDQSELAAWIGFNHDVFRSLKGGKPF 311 Query: 299 LLMESTPSLTNWQSVSKLKRPGMHKLSSLQAVAHGSDSVQYFQWRKSRGSSEKFHGAVID 358 +LMESTPS+TNWQ +SKLK+PGMH L+SLQAVAHGSD+VQYFQWRKSRGSSEK HGAV+D Sbjct: 312 MLMESTPSMTNWQPISKLKKPGMHLLASLQAVAHGSDTVQYFQWRKSRGSSEKLHGAVVD 371 Query: 359 HSGHAETRVFRDVAEVGRTLAELQDVVGTTTPVQTAIIYDWDNRWAIKDAQGIRNSGLKY 418 H GH TRVF+DV +VG+ L +LQ+VVG++ + A+I DW+NRWA+KD+QG RN G+ Y Sbjct: 372 HVGHENTRVFKDVTDVGQALEKLQEVVGSSVKPEVALINDWENRWAVKDSQGPRNGGIHY 431 Query: 419 EETVLQHYQALWELGIPVDIIGSEEDFSAYKLVIAPMLYLISEDNGKRIEKYVEQGGTFL 478 EET+ +HY+ LW++G+PVDII SE F +YKL+IAPMLY++ G+RIE++V+ GGTF+ Sbjct: 432 EETLKRHYRPLWDMGVPVDIIDSECCFDSYKLLIAPMLYMVRPGVGERIEEFVKNGGTFV 491 Query: 479 GTYWSGVVGETDLCHLGGFPGPLRRTLGIWAEETEGLHSRDLNGLVMDPGNSLKLSGEYD 538 TYWSG+V E+DLC L GFPGPLR+TLGIW+EE + L+ + N +VM GN L L G YD Sbjct: 492 ATYWSGIVNESDLCFLEGFPGPLRKTLGIWSEEIDSLYDGEKNSVVMSEGNKLGLVGSYD 551 Query: 539 AHEIAELIHLEGAEALGHYRSDFYAGRPALTVNKLGAGKAYHLATRVKDLQFYVDLYAAI 598 A E+ +LIHLEGAEAL Y DFYAGRPALTVN+LG GKAY++A+R + F+ D + + Sbjct: 552 AIELCDLIHLEGAEALAVYGDDFYAGRPALTVNQLGEGKAYYVASRNTE-PFFTDFFKKL 610 Query: 599 AGKERISRTLNSELPVGVTAQLRTDGEHDYVFVQNFSGAEQVVTLDGREYTDVESGAAAP 658 +E + R + +ELP GVTAQLR+DGE DYVFV NFS + Q V LD +EY DV +G Sbjct: 611 VEQEGLKRVVETELPQGVTAQLRSDGEFDYVFVLNFSESAQQVKLDEQEYEDVLAGGKVG 670 Query: 659 SELKLAVNGLAILKRGA 675 +EL+L +NG+ ILKR A Sbjct: 671 NELELPLNGVRILKRKA 687 >A9BHE4.1 A9BHE4_PETMO Beta-galactosidase EC=3.2.1.23 Length = 687 Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust. Identities = 401/675 (59%), Positives = 504/675 (74%), Gaps = 7/675 (1%) Query: 1 MLHGADYNPEQWLKYPEVLREDIRMMKLANCNVMSVGIFSWVSLEPEEGVFTFDWLDSVL 60 LHGADYNP+QWLKYPEVL EDIR+MKLA CNVMSVGIF+W +LEPEEG F F WLD V+ Sbjct: 15 FLHGADYNPDQWLKYPEVLEEDIRLMKLAGCNVMSVGIFAWSTLEPEEGKFNFGWLDKVI 74 Query: 61 NTFAENGIYAFLATPSGARPAWMSEKYPXXXXXXXXXXXXXHGVRHNHCYTSPVYREKTA 120 +NGIY LATPSGARPAWMS+KYP HG RHNHCYTSPVYREK Sbjct: 75 EKLYKNGIYTILATPSGARPAWMSQKYPEVLRVGPNRVRNLHGKRHNHCYTSPVYREKVN 134 Query: 121 LLNGKLAERYANHPAVIGWHISNEYGGECHCDLCQASFRDWLKVKYNNSLDEMNHAWWAT 180 ++N KLAERY+NHP VI WH+SNEYGGECHC+LCQ SFR+WLK KY +L+ +N AWW Sbjct: 135 IINTKLAERYSNHPGVIAWHVSNEYGGECHCELCQESFRNWLKEKYK-TLENLNDAWWTA 193 Query: 181 FWSHTYTSWNQVESPAPHGETQVHGLNLDWRRFVSESMIDFCQHEIDSVREYNPELPVTT 240 FWSHTYT W+Q+ESPAPHGE +HGLNLDW+RFV+ +DF +HEI+ +++ NP LPVTT Sbjct: 194 FWSHTYTDWSQIESPAPHGENLLHGLNLDWKRFVTHQTVDFFKHEIEPLKKINPSLPVTT 253 Query: 241 NMHNI-DGVDYRKLAKILDVVSWDAYPDWGYTEDNDDARLAAWTAMHHDMYRTFKH-KPF 298 N I +G+DY K +DV+SWD YP W NDD LA +M HD+ R+ K+ KPF Sbjct: 254 NFMGIYEGLDYWKFVDYVDVISWDNYPIW---HSNDDYDLACGVSMVHDLNRSLKNGKPF 310 Query: 299 LLMESTPSLTNWQSVSKLKRPGMHKLSSLQAVAHGSDSVQYFQWRKSRGSSEKFHGAVID 358 +LMESTPS TNW VSKLK+PGMH LSS+QAVAHGSD+VQYFQWRKSRGSSEKFHGAV+D Sbjct: 311 MLMESTPSTTNWHEVSKLKKPGMHLLSSIQAVAHGSDTVQYFQWRKSRGSSEKFHGAVVD 370 Query: 359 HSGHAETRVFRDVAEVGRTLAELQDVVGTTTPVQTAIIYDWDNRWAIKDAQGIRNSGLKY 418 H G+ TRVF DV VG TL L +++GTT + AII+DW+NRWA+KDAQG RN G+ Y Sbjct: 371 HCGYENTRVFNDVKIVGETLKRLDEIIGTTVDPEVAIIFDWENRWAMKDAQGPRNIGIHY 430 Query: 419 EETVLQHYQALWELGIPVDIIGSEEDFSAYKLVIAPMLYLISEDNGKRIEKYVEQGGTFL 478 EETV ++Y+ W+ G+PVD+I + DFS YKL+IAPMLY++ + G++I+++V+ GGTF+ Sbjct: 431 EETVKENYKPFWKNGVPVDVINMDCDFSKYKLLIAPMLYMVKQGVGEKIKEFVKNGGTFV 490 Query: 479 GTYWSGVVGETDLCHLGGFPGPLRRTLGIWAEETEGLHSRDLNGLVMDPGNSLKLSGEYD 538 TYWSG+V ETDLC LGGFPGPLR LGIW+EE + L+ + + D N L L GEY+ Sbjct: 491 ATYWSGIVNETDLCFLGGFPGPLREVLGIWSEEIDALYDGESRLVSFDNQNELGLKGEYE 550 Query: 539 AHEIAELIHLEGAEALGHYRSDFYAGRPALTVNKLGAGKAYHLATRVKDLQFYVDLYAAI 598 A E+ +LIHLEGA +L Y+ DFY GRPALTVN GKAY++A+R ++ QF Y + Sbjct: 551 AKELCDLIHLEGARSLATYKEDFYKGRPALTVNDFSKGKAYYIASRNEE-QFNDMFYGKL 609 Query: 599 AGKERISRTLNSELPVGVTAQLRTDGEHDYVFVQNFSGAEQVVTLDGREYTDVESGAAAP 658 + + + +++ELP G+TAQ+RTDGE+DY+FV NF+ E+VV LD ++Y D+ G + Sbjct: 610 IEELGLKKVVDTELPYGITAQMRTDGENDYIFVMNFTQEEKVVELDEKKYIDLLEGETSD 669 Query: 659 SELKLAVNGLAILKR 673 +L + G+ ILKR Sbjct: 670 RKLTVPGYGVKILKR 684 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.134 0.423 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,340,267,875 Number of extensions: 189812195 Number of successful extensions: 405064 Number of sequences better than 1.0e-05: 394 Number of HSP's gapped: 402791 Number of HSP's successfully gapped: 395 Length of query: 678 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 535 Effective length of database: 1,713,491,058 Effective search space: 916717716030 Effective search space used: 916717716030 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 135 (56.6 bits)