BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0350.0061.p (315 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KK21.1 B3KK21_9BACI Patatin 420 e-115 B1DFJ6.1 B1DFJ6_9BACL Patatin 362 2e-98 C0ZBX5.1 C0ZBX5_BREBN Putative uncharacterized protein 259 2e-67 B9IXX5.1 B9IXX5_BACCQ Phospholipase, putative 253 2e-65 Q4MI81.1 Q4MI81_BACCE Putative uncharacterized protein 251 5e-65 >B3KK21.1 B3KK21_9BACI Patatin Length = 307 Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust. Identities = 207/307 (67%), Positives = 238/307 (77%), Gaps = 3/307 (0%) Query: 1 MEINAVFEGGGVKGISLAGAVQASEQAGAVFKRVAGTSSGSIIASLLAVGYDGEAMSRII 60 M+INAVFEGGGVKGISLAGAV+A+E AG VF RVAGTSSGSI+AS+LA GY + + RII Sbjct: 1 MQINAVFEGGGVKGISLAGAVKAAENAGMVFSRVAGTSSGSIVASVLAAGYRADEIKRII 60 Query: 61 RTTAFTSFLKRGFLYNTAYVGPAFRVLIKKGLYSGEALESWIRGILKEKGLVTFGDLPRG 120 T F SFL+R ++NT ++GPA RVLIKKGLYSGEALE+WIR IL KG+ TF D+P G Sbjct: 61 EETPFHSFLQRAPIFNTKFIGPALRVLIKKGLYSGEALENWIREILLAKGIFTFSDIPAG 120 Query: 121 KLSIIASDITNGRLVVLPDDLKQYGISPDGFEVAKAVRMSCSIPYFFDPVMLRLSNEAAK 180 KL I+ASDITNGRL+VLPDDL+QYGI+P F VAKAVRMSCSIPYFFDPV+LRL AAK Sbjct: 121 KLYIVASDITNGRLLVLPDDLRQYGINPATFPVAKAVRMSCSIPYFFDPVILRLLGRAAK 180 Query: 181 GKSFAEQFVYMVDGGLLSNFPLWLFDEKEEGFKSPGRRIPTVGYQMIGKTEPQPHRITGP 240 GKSF EQFVY+VDGGLLSNFPLWLFD + +G P +P +G+QM+GK PH I GP Sbjct: 181 GKSFGEQFVYIVDGGLLSNFPLWLFDRESKGGPKP---LPVLGFQMVGKNSNLPHLIEGP 237 Query: 241 FSMLQAMVGTMLSAHDERYIETEKFIRTVKIPTLGIAMTEFNLAPERSDELYAAGYKAGE 300 ML AM TMLSAHDERYIE + RT+KIPTLGI T FNL E S+ LY +G AG Sbjct: 238 IGMLTAMFETMLSAHDERYIEQQNRNRTIKIPTLGIGTTHFNLTKEESENLYNSGLTAGT 297 Query: 301 AFFKNWR 307 FF W Sbjct: 298 MFFTRWN 304 >B1DFJ6.1 B1DFJ6_9BACL Patatin Length = 309 Score = 362 bits (929), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 178/311 (57%), Positives = 233/311 (74%), Gaps = 7/311 (2%) Query: 1 MEINAVFEGGGVKGISLAGAVQASEQAGAVFKRVAGTSSGSIIASLLAVGYDGEAMSRII 60 M+INAVFEGGGVKGISLAGAV+A+E G F +VAGTSSG+II++L+A Y G + RI+ Sbjct: 1 MKINAVFEGGGVKGISLAGAVRAAEMQGIQFNQVAGTSSGAIISALIAANYSGLDIKRIV 60 Query: 61 RTTAFTSFLKRGFLYNTAYVGPAFRVLIKKGLYSGEALESWIRGILKEKGLVTFGDLPRG 120 T F+SFLKR F++N + PA RVLIKKGLYSGEALE WI +L+ KG+ TFGDLP Sbjct: 61 ENTPFSSFLKRSFIFNLKVISPALRVLIKKGLYSGEALEYWISCLLEAKGIKTFGDLPEC 120 Query: 121 KLSIIASDITNGRLVVLPDDLKQYGISPDGFEVAKAVRMSCSIPYFFDPVMLR---LSNE 177 KL I+ASDITNGRL+VLP+D++ YG+ P VA+AVRMS SIPYFFDPV++R L + Sbjct: 121 KLRIVASDITNGRLLVLPEDIRIYGMDPKKLSVARAVRMSASIPYFFDPVVIRYSKLHSL 180 Query: 178 AAKGKSFAE-QFVYMVDGGLLSNFPLWLFDEKEEGFKSPGRRIPTVGYQMIGKTEPQPHR 236 KGK A+ Y+VDGGLLSNFPLWLFD+++ G +P +PTVG+QM+GK + +PH Sbjct: 181 TNKGKEKAQLHQAYIVDGGLLSNFPLWLFDKEQAGRTNP---VPTVGFQMVGKNDNEPHE 237 Query: 237 ITGPFSMLQAMVGTMLSAHDERYIETEKFIRTVKIPTLGIAMTEFNLAPERSDELYAAGY 296 I GP +ML+A+ TM+ AHDERYI+ RTVKIPTLG+ T+F+L +++L+ +G+ Sbjct: 238 IRGPLTMLEAIFETMMQAHDERYIKKYARDRTVKIPTLGVRTTQFHLPEGMAEKLFQSGF 297 Query: 297 KAGEAFFKNWR 307 K+ FF+ +R Sbjct: 298 KSATQFFEGFR 308 >C0ZBX5.1 C0ZBX5_BREBN Putative uncharacterized protein Length = 309 Score = 259 bits (663), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 132/308 (42%), Positives = 192/308 (62%), Gaps = 19/308 (6%) Query: 1 MEINAVFEGGGVKGISLAGAVQASEQAGAVFKRVAGTSSGSIIASLLAVGYDGEAMSRII 60 M+ +AVFEGGGVKGI+ GA++ E+ G ++R+AGTS+GSI+A+LL GY + I Sbjct: 1 MKADAVFEGGGVKGIAFIGALRVMEENGYTWERLAGTSAGSIVAALLGAGYSSHELKPIF 60 Query: 61 RTTAFTSFLKRGFLYNTAYVGPAFRVLIKKGLYSGEALESWIRGILKEKGLVTFGDLPRG 120 + FLKR L +GP + +++++G+Y + +E +I +L KG+ TFGDLP G Sbjct: 61 EELDYLHFLKRSGLVRLPLIGPIYELVVREGIYRADRIELFIEELLLRKGVRTFGDLPPG 120 Query: 121 KLSIIASDITNGRLVVLPDDLKQYGISPDGFEVAKAVRMSCSIPYFFDPVMLRLSNEAAK 180 KL ++ASD+TNG++++LPDDL +YG+ PD F VA+AVRMS SIP+FF P L Sbjct: 121 KLKVVASDVTNGKMLILPDDLARYGVEPDHFPVARAVRMSSSIPFFFQPAKL-------- 172 Query: 181 GKSFAEQFVYMVDGGLLSNFPLWLFDEKEEGFKSPGR-RIPTVGYQMIGKTEP-QPHRIT 238 + A Y+VDG LLSN+P+WLFD PG R PT+G+++ + + RI Sbjct: 173 --TSAGHVHYIVDGALLSNYPVWLFD-------VPGTPRWPTIGFRLTDDQDKREATRIK 223 Query: 239 GPFSMLQAMVGTMLSAHDERYIETEKFIRTVKIPTLGIAMTEFNLAPERSDELYAAGYKA 298 G FS + ++ TML AHD Y+E K +RT+ I TLG+ T+F L+ E +L+ +G A Sbjct: 224 GLFSFSRGLLATMLDAHDRLYVEKAKAVRTIFIHTLGVRTTQFQLSKEIRQQLFESGEAA 283 Query: 299 GEAFFKNW 306 F W Sbjct: 284 AHKFLAQW 291 >B9IXX5.1 B9IXX5_BACCQ Phospholipase, putative Length = 321 Score = 253 bits (645), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 133/309 (43%), Positives = 181/309 (58%), Gaps = 16/309 (5%) Query: 1 MEINAVFEGGGVKGISLAGAVQASEQAGAVFKRVAGTSSGSIIASLLAVGYDGEAMSRII 60 M+I+ VFEGGGV+GI+ GA+ A + G ++RVAGTS+GSIIA+LLA GY G + II Sbjct: 1 MKIDGVFEGGGVRGIAHVGAICALAEKGYTWERVAGTSAGSIIAALLAAGYSGSELKTII 60 Query: 61 RTTAFTSFLKRGFLYNTAYVGPAFRVLIKKGLYSGEALESWIRGILKEKGLVTFGDLPR- 119 + F KR F+ ++G G+YS +E WI +L++KG+ F DLP Sbjct: 61 TDIDYNKFTKRTFIDRIPFIGKGLSAWTTLGIYSNIFIEEWIEELLRKKGIHLFTDLPDL 120 Query: 120 GKLSIIASDITNGRLVVLPDDLKQYGISPDGFEVAKAVRMSCSIPYFFDPVMLRLSNEAA 179 KL IIASDI+NG++V+ PDDL YG F +AKAVRMS +IP+FF+PV R Sbjct: 121 NKLKIIASDISNGKMVIFPDDLPNYGFLNYRFSIAKAVRMSSTIPFFFEPVKWRTPK--- 177 Query: 180 KGKSFAEQFVYMVDGGLLSNFPLWLFDEKEEGFKSPGRRIPTVGYQMI-GKTEPQPHRIT 238 +Q YMVDGG+LSN+P+W+FD SP R PT G+ + + + P Sbjct: 178 -----WKQPCYMVDGGILSNYPIWIFDSP----TSP--RWPTFGFHFVKDEIQADPAHYN 226 Query: 239 GPFSMLQAMVGTMLSAHDERYIETEKFIRTVKIPTLGIAMTEFNLAPERSDELYAAGYKA 298 P SM + + TM+ AHD R+++ E RT+ IPT I T F L E D LY +GY A Sbjct: 227 EPISMFKGLFKTMMQAHDLRHLDKESKARTITIPTGSITSTNFELTKEEKDWLYNSGYNA 286 Query: 299 GEAFFKNWR 307 F ++W Sbjct: 287 ANKFLQSWN 295 >Q4MI81.1 Q4MI81_BACCE Putative uncharacterized protein Length = 321 Score = 251 bits (642), Expect = 5e-65, Method: Compositional matrix adjust. Identities = 133/309 (43%), Positives = 181/309 (58%), Gaps = 16/309 (5%) Query: 1 MEINAVFEGGGVKGISLAGAVQASEQAGAVFKRVAGTSSGSIIASLLAVGYDGEAMSRII 60 M+I+ VFEGGGV+GI+ GA+ A + G ++RVAGTS+GSIIA+LLA GY G + II Sbjct: 1 MKIDGVFEGGGVRGIAHVGAICALAEKGYKWERVAGTSAGSIIAALLAAGYSGSELKTII 60 Query: 61 RTTAFTSFLKRGFLYNTAYVGPAFRVLIKKGLYSGEALESWIRGILKEKGLVTFGDLPR- 119 + F KR F+ ++G G+YS +E WI +L++KG+ F DLP Sbjct: 61 TDIDYNKFTKRTFIDRIPFIGKGLSAWTTLGIYSNIFIEEWIEELLRKKGIHLFTDLPDL 120 Query: 120 GKLSIIASDITNGRLVVLPDDLKQYGISPDGFEVAKAVRMSCSIPYFFDPVMLRLSNEAA 179 KL IIASDI+NG++V+ PDDL YG F +AKAVRMS +IP+FF+PV R Sbjct: 121 NKLKIIASDISNGKMVIFPDDLPNYGFLNYRFSIAKAVRMSSTIPFFFEPVKWRTPK--- 177 Query: 180 KGKSFAEQFVYMVDGGLLSNFPLWLFDEKEEGFKSPGRRIPTVGYQMI-GKTEPQPHRIT 238 +Q YMVDGG+LSN+P+W+FD SP R PT G+ + + + P Sbjct: 178 -----WKQPCYMVDGGILSNYPIWIFDSP----TSP--RWPTFGFHFVKDEIQADPAHYN 226 Query: 239 GPFSMLQAMVGTMLSAHDERYIETEKFIRTVKIPTLGIAMTEFNLAPERSDELYAAGYKA 298 P SM + + TM+ AHD R+++ E RT+ IPT I T F L E D LY +GY A Sbjct: 227 EPISMFKGLFKTMMQAHDLRHLDKESKARTITIPTGSITSTNFELTKEEKDWLYNSGYNA 286 Query: 299 GEAFFKNWR 307 F ++W Sbjct: 287 ANKFLQSWN 295 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.139 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,888,196,006 Number of extensions: 78309346 Number of successful extensions: 178050 Number of sequences better than 1.0e-05: 373 Number of HSP's gapped: 177417 Number of HSP's successfully gapped: 375 Length of query: 315 Length of database: 3,060,696,203 Length adjustment: 135 Effective length of query: 180 Effective length of database: 1,788,859,178 Effective search space: 321994652040 Effective search space used: 321994652040 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 131 (55.1 bits)