BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0350.0048.p (671 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KK11.1 B3KK11_9BACI Copper amine oxidase domain protein 661 0.0 B3KCZ2.1 B3KCZ2_9BACI Copper amine oxidase domain protein 644 0.0 B1DF16.1 B1DF16_9BACL Copper amine oxidase domain protein 460 e-127 B1I2Z2.1 B1I2Z2_DESAP Copper amine oxidase domain protein 315 7e-84 Q1J202.1 Q1J202_DEIGD Putative uncharacterized protein 191 2e-46 >B3KK11.1 B3KK11_9BACI Copper amine oxidase domain protein Length = 910 Score = 661 bits (1706), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/633 (51%), Positives = 435/633 (68%), Gaps = 4/633 (0%) Query: 42 NIPAAGANQLILMMNSNKMYMNGKEYLANQPMAVKNGVSYVSIRAMXXXXXXXXXXXXXX 101 NIP G N LILMMNSNKMY NGK Y A QPMAVKNGVSYV+IR++ Sbjct: 278 NIPNLGPNDLILMMNSNKMYQNGKAYTAGQPMAVKNGVSYVAIRSLVDRVGLKLTYDGKT 337 Query: 102 XEVIVTKGDSIMRFKTDSKIYTVNGSKETMKGPAYQFKGTFMIPLTSITKALSLKYSVDN 161 E I+ +G+ +RFKT+S +YTVNG +++MKGPAYQ TFM+PLTSIT+AL + Y VD Sbjct: 338 KETIIIRGNDELRFKTNSSVYTVNGVRKSMKGPAYQSNNTFMVPLTSITQALDITYRVDQ 397 Query: 162 VGKRVILELNTKPTASFTVQPAEIYAGVTPVTFVTQSSSPNGTAIVQELWNENKKDMYDQ 221 KR+IL L++KP ASFTVQP EI+AG T VT+ T + SP G AIV E W E ++D++D+ Sbjct: 398 PNKRIILSLSSKPVASFTVQPGEIFAGQTKVTYKTNAYSPTGLAIVDEHW-EGREDVFDE 456 Query: 222 PGFYTITYSVQDAAGLWSDPYSATIQVLQPNQPPVANFSTDKDEYKMGEPVTLTDLSTDP 281 PG +T++YSVQDA+G WSDPY +I V PN PPVA F TDK +YK+GE +T ++S D Sbjct: 457 PGVHTVSYSVQDASGEWSDPYILSIHVSAPNTPPVAMFDTDKQQYKIGEKITYINMSYDS 516 Query: 282 E-GEELTVEWTNRALAYFNPGPVSIQLKVTDKHGLSSTFEKTINITSEQLYTQDEVAKLF 340 + G+E+T +W N A+F GP + L VTDKHG +S++EK IN+TSE LYT+D+ +LF Sbjct: 517 DPGDEITFKWENNDQAFFTAGPHKVLLIVTDKHGATSSYEKIINVTSEVLYTRDQFNQLF 576 Query: 341 TVPGDIISMDGGMIPGLPNLSYNLSSEPYMLIRSNSPETVNAEGVLYRETALGSTRFLVH 400 T GD + DG +P + SSEPY+LIRSNSPETV EG++YRE STRF++H Sbjct: 577 TGIGDKYTFDGSAVPTWNLMPITRSSEPYLLIRSNSPETVYQEGIVYREIGNASTRFMIH 636 Query: 401 HMNNMSTRQKLYVIATNRNLYPTTITTQYVGIAGPAVSPEYTGKISIQKYFNSMLTNSSY 460 H+N K+YV+ATN N +TT+Y G+ GP P TGK ++Q+Y SM + ++ Sbjct: 637 HLNATGKNMKMYVVATNINTMTARLTTEYTGLGGPINIPTATGKAAVQRYLESMQSADAF 696 Query: 461 GTITLQPGQSIPIMTDVSKIAMKPGEVXXXXXXXXXXXXVQYDVVMVEQSKDPVALLPTL 520 TI+L PG+S I+ D+S MK +V ++YDV+M++++KDP+ LP L Sbjct: 697 KTISLAPGESRIILQDLSAQTMKNQQVLSMFADLYSDSPIRYDVIMIDEAKDPIQKLPYL 756 Query: 521 PLLDRDGVHNRGTYPDSTRIISVFDQVGATQSKLVLGDNDKDKNLVGTDPMSGTEASNAG 580 L DGVHNRGTYPDSTRII +D VG T ++L LGD D NL G D ++G+ SNAG Sbjct: 757 KLHPSDGVHNRGTYPDSTRIIESYDLVGNTPTRLALGDKTNDPNLEGYDGINGSYQSNAG 816 Query: 581 NFGVLYKIRLESVAKNTLITFNPRGGNYLGSLMVNGTIVNLPNK--GNLASSDMNAVVYR 638 NFGVLYKI+L VA NTLIT NPRGG Y+G++MVNG I+ PN G +++ + AV+YR Sbjct: 817 NFGVLYKIKLHRVAPNTLITLNPRGGKYMGAMMVNGNIIQTPNTSGGAVSAPNEAAVLYR 876 Query: 639 SGNYEGPVDIVFSVASGSNLPVNLVFTPIPAPK 671 +GNYE V+I+F+ A GS+LP+N++ P+P K Sbjct: 877 TGNYEQTVEILFTAAPGSSLPINILLQPLPQVK 909 Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 66/128 (51%), Positives = 82/128 (64%) Query: 43 IPAAGANQLILMMNSNKMYMNGKEYLANQPMAVKNGVSYVSIRAMXXXXXXXXXXXXXXX 102 I A AN+L+L+MNSN MY NGK+Y A QPMAVK GVSYV+IRAM Sbjct: 124 ITNAAANELVLLMNSNVMYHNGKQYKAGQPMAVKQGVSYVAIRAMVERAGLKLSYDNKTK 183 Query: 103 EVIVTKGDSIMRFKTDSKIYTVNGSKETMKGPAYQFKGTFMIPLTSITKALSLKYSVDNV 162 E I+ K + +RF T S Y VNG MKGPAYQ FM+PLT+IT+AL + Y+V+ Sbjct: 184 ETIILKDGNELRFTTGSSNYKVNGQVRPMKGPAYQSNNVFMVPLTAITQALDIPYTVNQP 243 Query: 163 GKRVILEL 170 K+VIL+L Sbjct: 244 EKKVILDL 251 >B3KCZ2.1 B3KCZ2_9BACI Copper amine oxidase domain protein Length = 747 Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/652 (51%), Positives = 430/652 (65%), Gaps = 6/652 (0%) Query: 19 LPGASALPTEAPGLVAPLATGGQNIPAAGANQLILMMNSNKMYMNGKEYLANQPMAVKNG 78 +PG + PG N P+ +LIL NS KM +G Y A QPM VK G Sbjct: 96 VPGTETGEVQEPGTTTEGQNNQNNTPSVTGKELILYFNSTKMVQDGVTYNAPQPMQVKKG 155 Query: 79 VSYVSIRAMXXXXXXXXXXXXXXXEVIVTKGDSIMRFKTDSKIYTVNGSKETMKGPAYQF 138 VSYV IRA+ E I+TKG + +RFKTDS YTVNG +TMKG +YQ Sbjct: 156 VSYVPIRALVDRVGFKVTYDKKTKETIITKGSNELRFKTDSSKYTVNGVTKTMKGTSYQT 215 Query: 139 KGTFMIPLTSITKALSLKYSVDNVGKRVILELNTKPTASFTVQPAEIYAGVTPVTFVTQS 198 K TFM+PLT+IT+AL ++Y VDNVGKRVI+ L +KP A FTV P EI+AG T VT+ Q Sbjct: 216 KSTFMVPLTAITQALDIQYKVDNVGKRVIMSLESKPVAKFTVGPKEIFAGKTTVTYTPQV 275 Query: 199 SSPNGTAIVQELWNENKKDMYDQPGFYTITYSVQDAAGLWSDPYSATIQVLQPNQPPVAN 258 + G I+ E W E K+D++D PG Y +TYSVQD+ G WS+PYS TI V+QPN PPVA Sbjct: 276 ENVQG-EIIDERW-EGKQDIFDAPGQYIVTYSVQDSTGAWSEPYSQTITVVQPNLPPVAM 333 Query: 259 FSTDKDEYKMGEPVTLTDLSTDPE--GEELTVEWTNRALAYFNPGPVSIQLKVTDKHGLS 316 F TDK EYKMGE +T TD S D + E+LT +W N+ A+F+PG +I+L VTDK GLS Sbjct: 334 FETDKMEYKMGELITYTDQSYDDQDKNEDLTYKWENKEYAFFSPGVYTIKLTVTDKKGLS 393 Query: 317 STFEKTINITSEQLYTQDEVAKLFTVPGDIISMDGGMIPGLPNLSYNLSSEPYMLIRSNS 376 S++E TIN+T+E LY QD+ LF G+ S G + P ++Y+ EP LIRSNS Sbjct: 394 SSYETTINVTNETLYEQDDFNMLFIPEGEKFSFLGN-VTSRPKINYDFYDEPSTLIRSNS 452 Query: 377 PETVNAEGVLYRETALGSTRFLVHHMNNMSTRQKLYVIATNRNLYPTTITTQYVGIAGPA 436 PETVN+EG++Y+ETA+G RF++HH+NN++ K+YVIATN+N P T+ Y+G AGP+ Sbjct: 453 PETVNSEGIVYQETAVGDMRFMIHHVNNLNKNVKMYVIATNKNTTPVTLRQDYLGFAGPS 512 Query: 437 VSPEYTGKISIQKYFNSMLTNSSYGTITLQPGQSIPIMTDVSKIAMKPGEVXXXXXXXXX 496 GK S+ YF SM S ++TL PG+ +MT++S+I MK G V Sbjct: 513 PIATAAGKKSVLNYFQSMQDGSKRTSVTLAPGEQKLVMTELSEIRMKQGHVISLYSDMYS 572 Query: 497 XXXVQYDVVMVEQSKDPVALLPTLPLLDRDGVHNRGTYPDSTRIISVFDQVGATQSKLVL 556 +Q+DVVM+++ DP+ +L TLP+LDRDGVHNRGTYPDSTRII + VGA +LVL Sbjct: 573 DLPIQFDVVMIDEKSDPLKVLSTLPILDRDGVHNRGTYPDSTRIIRYSELVGAESQRLVL 632 Query: 557 GDNDKDKNLVGTDPMSGTEASNAGNFGVLYKIRLESVAKNTLITFNPRGGNYLGSLMVNG 616 GDN D NL G DPM G N GNFGVLYKI L+ VA NTLI+FNPRGG Y G M+NG Sbjct: 633 GDNQDDPNLQGMDPMVGDITHNTGNFGVLYKITLDRVAPNTLISFNPRGGKYSGYAMMNG 692 Query: 617 TIVNLPNKGNLASSDMNAVVYRSGNYEGPVDIVFSVASGSNLPVNLVFTPIP 668 TIV + + G ++ + AV+YR+G+YE V+I+ + A GSNLPVNL+FT +P Sbjct: 693 TIVPIYSLGQVSPGE-QAVLYRTGDYEQKVEIMLTAAPGSNLPVNLLFTQLP 743 >B1DF16.1 B1DF16_9BACL Copper amine oxidase domain protein Length = 652 Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust. Identities = 253/639 (39%), Positives = 368/639 (57%), Gaps = 7/639 (1%) Query: 35 PLATGGQNIPAAGANQLILMMNSNKMYMNGKEYLANQPMAVKNGVSYVSIRAMXXXXXXX 94 P+A G + G NQLIL+ + +MY NGK Y+A QP+ G +Y+S A+ Sbjct: 19 PVAAQG---ASTGQNQLILLQKTKQMYHNGKLYMAAQPLTELKGTTYISATAIAGRLGGS 75 Query: 95 XXXXXXXXEVIVTKGDSIMRFKTDSKIYTVNGSKETMKGPAYQFKGTFMIPLTSITKALS 154 E ++ + +R+ + YTVNG++ T G + G+ MIPL S+ + Sbjct: 76 VLYDANKKEYVLRSTANELRYAVNKSSYTVNGTRATFTGAPFVQNGSLMIPLRSVLQPFG 135 Query: 155 LKYSVDNVGKRVILELNTKPTASFTVQPAEIYAGVTPVTFVTQSSSPNGTAIVQELWNEN 214 + S K+++L TKP A F + +YAG T VT+ S SP+G AIV E W + Sbjct: 136 MTLSTIPAQKKIVLTWTTKPVAKFNIATGVVYAGQTEVTYGDMSYSPSGAAIVNERW-DG 194 Query: 215 KKDMYDQPGFYTITYSVQDAAGLWSDPYSATIQVLQPNQPPVANFSTDKDEYKMGEPVTL 274 K+ +++ G YT+T VQDA G+WSDPYS TI VL PN PP A F+TDK YKMGE + Sbjct: 195 KQTVFEAAGTYTVTKWVQDANGVWSDPYSVTINVLPPNLPPEARFATDKSYYKMGELIQY 254 Query: 275 TDLSTDPEGEELTVEWTNRALAYFNPGPVSIQLKVTDKHGLSSTFEKTINITSEQLYTQD 334 D+S+D E + EW N A A+F PG ++ LKVTD HGL+S F +T+ IT++ LYT+ Sbjct: 255 NDISSDDENKITKREWVNNAKAFFEPGEQTVTLKVTDAHGLTSEFSQTVTITNDTLYTKQ 314 Query: 335 EVAKLFTVPGDIISMDGGMIPGLPNLSYNL-SSEPYMLIRSNSPETVNAEGVLYRETALG 393 E +L+T G+ ++DG + LP Y + S+ IRSNSPE +N EG+ Y++TA G Sbjct: 315 EFDQLYTDQGEKFTIDGASVLKLPTQPYTVVSNGQQTFIRSNSPEMINDEGIYYQDTANG 374 Query: 394 STRFLVHHMNNMSTRQKLYVIATNRNLYPTTITTQYVGIAGPAVSPEYTGKISIQKYFNS 453 + RFL+H+ NN K+Y++ATN N T+T + +G+ GPA GK + Y S Sbjct: 375 NVRFLIHNQNNRPNPVKVYIVATNENSTAATVTDERIGLGGPAPYVTQAGKAATANYLLS 434 Query: 454 MLTNSSYGTITLQP-GQSIPIMTDVSKIAMKPGEVXXXXXXXXXXXXVQYDVVMVEQSKD 512 N GT+T P GQS +++ +S + G V +++ V++V+ SKD Sbjct: 435 RTVNP-VGTVTTIPAGQSRVVLSPLSSKEVVNGRVITLYADVTTSAPIKFSVIVVDASKD 493 Query: 513 PVALLPTLPLLDRDGVHNRGTYPDSTRIISVFDQVGATQSKLVLGDNDKDKNLVGTDPMS 572 + LP LP+L RDG H RGT+ + R I+V +G S+++L D D L G D ++ Sbjct: 494 VLQALPQLPILPRDGKHVRGTFEQANRSINVLQTIGDVPSRMILADKVVDTRLSGFDVLT 553 Query: 573 GTEASNAGNFGVLYKIRLESVAKNTLITFNPRGGNYLGSLMVNGTIVNLPNKGNLASSDM 632 G SN GN G LY + L V +TLI NPRGG+Y G+ ++N +V N L++++ Sbjct: 554 GDAMSNDGNNGALYVLNLWHVQPHTLIALNPRGGHYGGAFLINNKLVYATNTTILSNANE 613 Query: 633 NAVVYRSGNYEGPVDIVFSVASGSNLPVNLVFTPIPAPK 671 V+YR+G+ E V IVF+ ASGSNLP+NL+F P+P K Sbjct: 614 AGVLYRTGDTEESVSIVFTPASGSNLPINLLFLPLPQGK 652 >B1I2Z2.1 B1I2Z2_DESAP Copper amine oxidase domain protein Length = 650 Score = 315 bits (808), Expect = 7e-84, Method: Compositional matrix adjust. Identities = 198/632 (31%), Positives = 308/632 (48%), Gaps = 18/632 (2%) Query: 46 AGANQLILMMN--SNKMYMNGKEYLANQPMAVKNGVSYVSIRAMXXXXXXXXXXXXXXXE 103 A Q ++++N ++ ++N + P + +G + V +R + Sbjct: 28 ASPGQKVILLNPRASTAFVNAVPTGLDVPPVIHSGYTLVPLRFIGEALEVAVDWEAETKT 87 Query: 104 VIVTKGDSIMRFKTDSKIYTVNGSKETMKGPAYQFKGTFMIPLTSITKALSLKYSVDNVG 163 ++ + +R S VNG + PA G ++PL ++ AL D Sbjct: 88 ASLSGPGTAIRLAAGSSEALVNGRAVELPTPARIKDGRILVPLRFVSVALGATVHFDAAT 147 Query: 164 KRVILELN----TKPTASFTVQPAEIYAGVTPVTFVTQSSSPNGTAIVQELWNENKKDMY 219 K + + + T P A F++ P + G +T +S P G IV+ W+ + Y Sbjct: 148 KEITITADLTSKTPPVARFSLIPNPVRPG-GELTVRDESFHPEGVEIVERAWS-GLEPWY 205 Query: 220 DQPGFYTITYSVQDAAGLWSDPYSATIQVLQPNQPPVANFSTDKDEYKMGEPVTLTDLST 279 +Q G Y +T V+DA G WS PY+ + V N PPVA F T+KD YK+GEPV + S Sbjct: 206 EQAGLYEVTLRVRDANGNWSAPYTVRLNV---NTPPVAGFRTEKDFYKIGEPVVYVNESF 262 Query: 280 DPEGEELTVEWTNRALAYFNPGPVSIQLKVTDKHGLSSTFEKTINITSEQLYTQDEVAKL 339 DP+G EL WTNR A+F G + L+V D G FE + ++ E YT+ + L Sbjct: 263 DPDGHELIYRWTNREPAFFEAGRHRVTLEVEDPLGGKDRFELVVPVSEEVHYTRTQYHLL 322 Query: 340 FTVPGDIISMDGGMIPGLPNLSYNLSSEPYMLIRSNSPETVNAEGVLYRETALGSTRFLV 399 + P +I + ++ LP L S L+RSNSPE V A G+LYR+T G R +V Sbjct: 323 YGEPKKVIPFEERVL-DLPVLQLPAVSRARTLLRSNSPEDVPAPGLLYRDTVSGPGRLMV 381 Query: 400 HHMNNMSTRQKLYVIATNRNLYPTTITTQYVGIAGPAVSPEYTGKISIQKYFNSMLTNSS 459 HH+N R K+ V+A N +T G++ P+ + G+ + +F S Sbjct: 382 HHLNKTGGRLKIAVLAQNPGTEAVRVTITRQGLSRPSTRILHQGREHLMHFFGV----PS 437 Query: 460 YGTITLQPGQSIPIMTDVSKIAMKPGEVXXXXXXXXXXXXVQYDVVMVEQSKDPVALLPT 519 T + PG+++ ++ +S + ++PG + + VV V DPVA+ P Sbjct: 438 PATFVIPPGKTVDLLPGLSSLTLRPGFCVTGLADFSAEAPLTFYVVAVPADADPVAVFPQ 497 Query: 520 LPLLDRDGVHNRGTYPDSTRIISVFDQVGATQSKLVLGDNDKDKNLVGTDPMSGTEASNA 579 LP+L DG+H RGT+P + R+I V + S+LVLGD D L G D ++G SN Sbjct: 498 LPVLPPDGLHVRGTFPMADRLI-VVPESSPVNSRLVLGDGVHDVLLTGIDALTGERVSNH 556 Query: 580 GNFGVLYKIRLESVAKNTLITFNPRGGNYLGSLMVNGTIVNLPNKGNLASSDMNAVVYRS 639 GN+GV+Y+I E V T++ NPRGG Y G+L +NG + P +G L AV+ + Sbjct: 557 GNYGVVYEILFERVVPGTVVLLNPRGGVYCGALRMNGLVWETPVEGFL-KPQRQAVIIQR 615 Query: 640 GNYEGPVDIVFSVASGSNLPVNLVFTPIPAPK 671 G + + ++ SGS LPVN + +P K Sbjct: 616 PVLPGALRLEYTAPSGSYLPVNFLLVQLPENK 647 >Q1J202.1 Q1J202_DEIGD Putative uncharacterized protein Length = 579 Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 165/565 (29%), Positives = 259/565 (45%), Gaps = 54/565 (9%) Query: 117 TDSKIYTVNGSKETMKGPAYQFKGTFMIPLTSITKALSLKYSVDNVGKRVILELNTKPTA 176 TD +VNG P G M+PL T L + VD G+ L+L Sbjct: 42 TDQTAVSVNGQASQYLSPPRLLNGRTMLPLRE-TAVLLGQTLVDAGGQ---LQLG----- 92 Query: 177 SFTVQPAEIYAGVTPVTFVTQSSSPNGTAIVQELWNENKKDMYDQPGFYTITYSVQDA-- 234 TV PA A F+ P+G+ + Y + DA Sbjct: 93 RLTVDPARNAA------FLAGVLQPDGSVVTVGTT------------LYVSARLLADALN 134 Query: 235 AGLWSDPYSATIQVLQPNQPPVA---NFSTDKDEYKMGEPVTLTDLSTDPEGEEL-TVEW 290 A L D + T+ L+ P+A FSTDK Y GE V T+ + DP+G ++ + +W Sbjct: 135 ANLTVDGRTLTLTALREGGNPLAPQARFSTDKTTYAPGERVIFTEYAFDPDGADIVSRKW 194 Query: 291 TNRALAYFNPGPVSIQLKVTDKHGLSST-FEKTINITSEQLYTQDEVAKLFTVPGDIISM 349 T R YF PG ++ L+VT+ GL S F +TI + + T A + PGD Sbjct: 195 TGRQDVYFQPGTYTVTLQVTNSRGLQSEPFSRTIRVEGVPVDTPLTYALKYAEPGD--RF 252 Query: 350 DGGMIPGLPNLSYN-LSSEPYMLIRSNSPETVNAEGVLYRETALGSTRFLVHHMNNMSTR 408 ++ P ++ + + Y L+ S+SPE G+LY+++ G R L +H+N + Sbjct: 253 PDPLVSSYPAVAAQPVFGDRYPLLFSDSPEAPTQSGILYQDSLAGRARLLAYHLNALGRP 312 Query: 409 QKLYVIATNRNLYPTTITTQYVGIAGPAVSPEYTGKISIQKYFNSMLTNSSYGTITLQPG 468 +LY++A N P + T+ +G P G++++ YF S + +TL PG Sbjct: 313 ARLYILARNLEGRPVEVRTERLGETAPTRIEGLLGQVTLLDYFAS----TGEHVLTLAPG 368 Query: 469 QSIPIMTDVSKIAMKPGEVXXXXXXXXXXXXVQYDVVMVEQSKDPVA-LLPTLPLLDRDG 527 QS + + + G V+ VM+E S P A ++ +P L D Sbjct: 369 QSAAVYASPT---LNAGSGVNVMQDLITSGRVELTFVMLEDSLPPTAQVVQQIPYLPPDD 425 Query: 528 VHNRGTYPDSTRIISVFDQVGATQSKLVLGDNDKDKNLVGTDPMSGTEASNAGNFGVLYK 587 H RGT+P++ R + V + ++LV+GD D L GTD ++G GN+GVLY Sbjct: 426 RHQRGTFPNAVRPLRV--NLTTLPARLVIGDGQVDPALTGTDVLTGRPQRLLGNYGVLYD 483 Query: 588 IRLESVAKNTLITFNPRGGNYLGSLMV-NGTI---VNLPNKGNLASSDMNAVVYRSGNYE 643 + + A T + +PRGG Y G++ + +G I + LP GN + D +++R+ + Sbjct: 484 LEVNGAA-GTAVALSPRGGLYRGAMNIEDGPITQTIKLPRTGNALTPDQPVLLWRAQSDR 542 Query: 644 GPVDIVFSVASGSNLPVNLVFTPIP 668 ++I F ASGSNLP++LVF P Sbjct: 543 --LNIDFVPASGSNLPISLVFYRAP 565 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.313 0.131 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,943,204,391 Number of extensions: 166316197 Number of successful extensions: 399545 Number of sequences better than 1.0e-05: 26 Number of HSP's gapped: 399510 Number of HSP's successfully gapped: 32 Length of query: 671 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 528 Effective length of database: 1,713,491,058 Effective search space: 904723278624 Effective search space used: 904723278624 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 135 (56.6 bits)