BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0350.0002.p (623 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DKN8.1 B1DKN8_9BACL 5-methyltetrahydropteroyltriglutamate--hom... 714 0.0 B3K5X3.1 B3K5X3_9BACI 5-methyltetrahydropteroyltriglutamate--hom... 713 0.0 C0ZEA1.1 C0ZEA1_BREBN 5-methyltetrahydropteroyltriglutamate--hom... 710 0.0 C1PBH5.1 C1PBH5_BACCO 5-methyltetrahydropteroyltriglutamate/homo... 653 0.0 Q9KFP1.1 METE_BACHD 5-methyltetrahydropteroyltriglutamate--homoc... 647 0.0 >B1DKN8.1 B1DKN8_9BACL 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase EC=2.1.1.14 Length = 762 Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust. Identities = 345/596 (57%), Positives = 427/596 (71%) Query: 22 TSNLGYPRIGKNREWKKTLEAYWSGKIDEQDFLAQMAGIQLQHLQSQQKAGIDLIPVNDF 81 +S LGYPRIG+NREWKK LEA+W+GK++E + Q+ I+L HL+ QQ GID IPVNDF Sbjct: 4 SSVLGYPRIGENREWKKALEAFWAGKLEESELHKQLQEIRLNHLRKQQDKGIDFIPVNDF 63 Query: 82 TFYDHVLDTAVMFGIIPQRYAYNGGAVPLDLYFAMARGNASAPACEMTKWFNTNYHYIVP 141 ++YD VLDTA MFGI+P+R++YNGG VP+ +Y+ +ARG A A EMTKWFNTNYHYIVP Sbjct: 64 SYYDQVLDTAAMFGIVPKRFSYNGGPVPISVYYGIARGTKDAAASEMTKWFNTNYHYIVP 123 Query: 142 EIGSLTPQLTENKPLAAYRFAKTQAGIEGKPVIVGLYTFLKLSKGFPAAEIGEVAERFLP 201 E P LTENKPL AYR AK + GIEGKPVI+G ++FLKLSKG+ +E+ L Sbjct: 124 EFYGAQPALTENKPLIAYREAKEKLGIEGKPVILGPFSFLKLSKGYGRSEVDSWLSILLK 183 Query: 202 VYIQLLQELEQEGVAWVQIDEPAVVTGLTPEEIALLKTIYGAISAAVPGLKLILQTYFXX 261 +Y+Q+LQEL EGV WVQIDEP +VT L+ +++A L+T+YG I+ AVPGLK++LQTYF Sbjct: 184 LYVQVLQELAAEGVQWVQIDEPVLVTKLSNDDLARLRTVYGKIAEAVPGLKIMLQTYFES 243 Query: 262 XXXXXXXXXXXVQAIGLDFVHDGGVNLEAIERLGWPAGKLLGAGIIDGRSIWRADPDAKL 321 VQ +GLD VH NL AI + G+PA K+LGAG+IDGR IW+A KL Sbjct: 244 VDQYKEIVSLPVQGVGLDLVHGLKGNLSAIRQYGFPADKVLGAGVIDGRGIWKASLGKKL 303 Query: 322 GLIQKLAAHVPLDRLILQPSSSLLHVPVTVQSEGKLKPAVKQALAFADEKXXXXXXXXXX 381 L+++L V D+L++Q S SLLHVPVT + E KL+P +K ALAFADEK Sbjct: 304 ELLKELQGLVSADKLLVQTSCSLLHVPVTTKPETKLQPELKNALAFADEKLDEVVLLTQA 363 Query: 382 XXXXXXXXXXXXXESREALAAFRALPERGRQDVAEQVRRLDALPDSRSLPFAERVKLQQA 441 ++ + A R R DV V R++ +R PFAER QQ Sbjct: 364 LNNGEVSVAEALQSNQSDVGALEQSASRNRSDVKSAVARIETQVPARKSPFAERNAAQQV 423 Query: 442 KWKLPLLPTTTIGSFPQTAEVRQARLKWRKGVWNEERYDTFVRRQIAEAITLQEELGLDV 501 KW+LPL PTTTIGSFPQ+ EVR+AR WRKG WN E+Y +F++ QI I+ QEE+GLDV Sbjct: 424 KWQLPLFPTTTIGSFPQSTEVRKARQSWRKGEWNNEQYSSFIQDQIDAWISYQEEIGLDV 483 Query: 502 LVHGEFERTDMVEFFGEKLAGYLFTQNGWVQSYGSRCVKPPVIYADVAFIQPMTVKESVY 561 LVHGEFERTDMVEFFGEKL G+ FTQNGWVQSYGSRCVKPPVI+ DVAF MTV+E+VY Sbjct: 484 LVHGEFERTDMVEFFGEKLEGFAFTQNGWVQSYGSRCVKPPVIFGDVAFKDAMTVEETVY 543 Query: 562 AQSLTRLPVKGMLTGPVTILNWSFVRDDLSREEVAKQIALALRHEVQALEDAGIEM 617 AQS T PVKGMLTGP+TI+NWSFVRDD+ RE++A Q+A ALR EV+ALE+AGI M Sbjct: 544 AQSKTNRPVKGMLTGPITIMNWSFVRDDIEREQIAYQLAYALRQEVEALENAGIGM 599 >B3K5X3.1 B3K5X3_9BACI 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase EC=2.1.1.14 Length = 762 Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/596 (58%), Positives = 428/596 (71%) Query: 22 TSNLGYPRIGKNREWKKTLEAYWSGKIDEQDFLAQMAGIQLQHLQSQQKAGIDLIPVNDF 81 +S LGYPRIG +REWKK LEA+W+GK++E +F Q+ I+L HL+ QQ++GIDLI VNDF Sbjct: 4 SSVLGYPRIGADREWKKALEAFWAGKLEESEFHKQLREIRLNHLRKQQESGIDLIAVNDF 63 Query: 82 TFYDHVLDTAVMFGIIPQRYAYNGGAVPLDLYFAMARGNASAPACEMTKWFNTNYHYIVP 141 ++YDH+LDTA MFGI+P+R+ Y GG VPL +Y+ +ARG A A EMTKWFNTNYHYIVP Sbjct: 64 SYYDHILDTATMFGIVPKRFPYEGGIVPLSVYYGIARGTKDATASEMTKWFNTNYHYIVP 123 Query: 142 EIGSLTPQLTENKPLAAYRFAKTQAGIEGKPVIVGLYTFLKLSKGFPAAEIGEVAERFLP 201 E+ P LTEN+PLAAYR AK + GIEGKPVIVG TFLKLSKG+ A+E ++ LP Sbjct: 124 ELDGAVPVLTENRPLAAYREAKEKLGIEGKPVIVGPLTFLKLSKGYQASETDAWLDKLLP 183 Query: 202 VYIQLLQELEQEGVAWVQIDEPAVVTGLTPEEIALLKTIYGAISAAVPGLKLILQTYFXX 261 +Y+Q+LQEL EGV WVQIDEP +V L+ ++ L TIY +A+ PGL ++LQTYF Sbjct: 184 LYVQILQELAHEGVQWVQIDEPILVAKLSEADLKRLATIYETFAASAPGLNIMLQTYFES 243 Query: 262 XXXXXXXXXXXVQAIGLDFVHDGGVNLEAIERLGWPAGKLLGAGIIDGRSIWRADPDAKL 321 V IGLD VH NL+AI++ G+P K+LGAGIIDGR IW+A KL Sbjct: 244 VENYQDIIQLPVSGIGLDLVHGYKGNLQAIQQSGFPVNKVLGAGIIDGRGIWKASLREKL 303 Query: 322 GLIQKLAAHVPLDRLILQPSSSLLHVPVTVQSEGKLKPAVKQALAFADEKXXXXXXXXXX 381 +++L +V +RLI+Q S SLLHVPVTV E KL+P +K ALAFADEK Sbjct: 304 SQLEELTKYVAAERLIVQSSCSLLHVPVTVSKETKLQPDLKGALAFADEKLIELDLLTKA 363 Query: 382 XXXXXXXXXXXXXESREALAAFRALPERGRQDVAEQVRRLDALPDSRSLPFAERVKLQQA 441 + A+ A ER R DV V + A +RSLPFAER QQ Sbjct: 364 ISTGAARIAKELEHNDLAIQALSQSEERNRLDVQRAVAEVSAQNPARSLPFAERHDAQQN 423 Query: 442 KWKLPLLPTTTIGSFPQTAEVRQARLKWRKGVWNEERYDTFVRRQIAEAITLQEELGLDV 501 KW+LP+ PTTTIGSFPQ+AEVR+AR WRKG WN E+Y+ F++ QI I LQEE+GLDV Sbjct: 424 KWQLPIFPTTTIGSFPQSAEVRKARQAWRKGEWNNEQYEQFIQEQIDIWIKLQEEIGLDV 483 Query: 502 LVHGEFERTDMVEFFGEKLAGYLFTQNGWVQSYGSRCVKPPVIYADVAFIQPMTVKESVY 561 LVHGEFERTDMVEFFGEKL G+ FTQ GWVQSYGSRCVKPPVI+ DVAF QPMTV+E+ Y Sbjct: 484 LVHGEFERTDMVEFFGEKLGGFAFTQFGWVQSYGSRCVKPPVIFGDVAFEQPMTVEETKY 543 Query: 562 AQSLTRLPVKGMLTGPVTILNWSFVRDDLSREEVAKQIALALRHEVQALEDAGIEM 617 AQS T PVKGMLTGP+TI+NWSFVR+D+SRE++A Q+A ALR EV+ALE AGI M Sbjct: 544 AQSKTSRPVKGMLTGPITIMNWSFVREDISREQIAYQLAYALRQEVEALEQAGIGM 599 >C0ZEA1.1 C0ZEA1_BREBN 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase EC=2.1.1.14 Length = 763 Score = 710 bits (1833), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/598 (58%), Positives = 432/598 (72%) Query: 20 ITTSNLGYPRIGKNREWKKTLEAYWSGKIDEQDFLAQMAGIQLQHLQSQQKAGIDLIPVN 79 + +SNLGYPRIGKNREWKK LEA+W+G IDE + QM I+ Q+L QQ+ G++LIPV Sbjct: 1 MKSSNLGYPRIGKNREWKKALEAFWAGSIDEASLVQQMEQIRHQNLLRQQEKGVELIPVG 60 Query: 80 DFTFYDHVLDTAVMFGIIPQRYAYNGGAVPLDLYFAMARGNASAPACEMTKWFNTNYHYI 139 DFT+YDH+LD AVMFG++P+RY Y GG V L YFAMARG+ A A EMTKWFNTNYHYI Sbjct: 61 DFTYYDHMLDMAVMFGMVPKRYEYEGGPVSLATYFAMARGSKEAVASEMTKWFNTNYHYI 120 Query: 140 VPEIGSLTPQLTENKPLAAYRFAKTQAGIEGKPVIVGLYTFLKLSKGFPAAEIGEVAERF 199 VPE G P +TENKPL AY AK + GI GKPVIVG YTF+KLSKG+ E + ++ Sbjct: 121 VPEFGERQPAITENKPLQAYLEAKEKYGIIGKPVIVGPYTFVKLSKGYEKNEFEIIVDQL 180 Query: 200 LPVYIQLLQELEQEGVAWVQIDEPAVVTGLTPEEIALLKTIYGAISAAVPGLKLILQTYF 259 +P+YI +L+ELE GV WVQIDEPA V ++ +E A++K IY I A+P L+ +LQTYF Sbjct: 181 VPLYIDVLRELELHGVEWVQIDEPAFVRDVSEQERAIIKRIYTQIGQALPHLQCMLQTYF 240 Query: 260 XXXXXXXXXXXXXVQAIGLDFVHDGGVNLEAIERLGWPAGKLLGAGIIDGRSIWRADPDA 319 V+ IGLDFVH NL ++ G+PA K+L AGIIDGR+IWRA + Sbjct: 241 EAVDWYKELVSLPVKGIGLDFVHGAKRNLTHLKTHGFPADKILAAGIIDGRNIWRASIEE 300 Query: 320 KLGLIQKLAAHVPLDRLILQPSSSLLHVPVTVQSEGKLKPAVKQALAFADEKXXXXXXXX 379 K L+ +++ VPL++L LQPSSSLLHVPVTV++E L V ALAF+DEK Sbjct: 301 KWELVNEISEIVPLEKLWLQPSSSLLHVPVTVEAESDLPEEVVSALAFSDEKLGEVQLLV 360 Query: 380 XXXXXXXXXXXXXXXESREALAAFRALPERGRQDVAEQVRRLDALPDSRSLPFAERVKLQ 439 ++ L P R RQDV +R++ A+ RS+P+ ER ++Q Sbjct: 361 QGFRYGKYVISKEIAQNEADLLKLALSPARNRQDVKNALRQITAVKLERSIPYLERREIQ 420 Query: 440 QAKWKLPLLPTTTIGSFPQTAEVRQARLKWRKGVWNEERYDTFVRRQIAEAITLQEELGL 499 Q WKLPLLPTTTIGSFPQTAEVRQAR +++KG W E+YD F++ QI E + +QEELGL Sbjct: 421 QNTWKLPLLPTTTIGSFPQTAEVRQARQQFKKGNWTVEQYDAFIQAQIKEWVKIQEELGL 480 Query: 500 DVLVHGEFERTDMVEFFGEKLAGYLFTQNGWVQSYGSRCVKPPVIYADVAFIQPMTVKES 559 DVLVHGEFERTDMVE+FGEKL G+LFT+NGWVQSYGSRCVKPPVIY DV F+ PMTVKES Sbjct: 481 DVLVHGEFERTDMVEYFGEKLDGFLFTKNGWVQSYGSRCVKPPVIYGDVEFVAPMTVKES 540 Query: 560 VYAQSLTRLPVKGMLTGPVTILNWSFVRDDLSREEVAKQIALALRHEVQALEDAGIEM 617 V+A+SLT P+KGMLTGP TILNWSF RDD+SR+EV +QIALALR EV+ALE+AGI M Sbjct: 541 VFAKSLTAKPMKGMLTGPATILNWSFARDDVSRQEVCEQIALALRKEVEALEEAGILM 598 >C1PBH5.1 C1PBH5_BACCO 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase EC=2.1.1.14 Length = 765 Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 317/602 (52%), Positives = 411/602 (68%), Gaps = 3/602 (0%) Query: 18 NKITTSNLGYPRIGKNREWKKTLEAYWSGKIDEQDFLAQMAGIQLQHLQSQQKAGIDLIP 77 +K+ +SNLGYPRIG+ REWKK LE +WS K+ E+ FL ++ ++L +L+ Q+ +GIDLIP Sbjct: 2 SKVKSSNLGYPRIGEKREWKKALEQFWSKKLSEEAFLKRIKELRLSYLEKQKNSGIDLIP 61 Query: 78 VNDFTFYDHVLDTAVMFGIIPQRYAYNGGAVPLDLYFAMARGNASAPACEMTKWFNTNYH 137 + DF+ YDH+LDT+V+FG IP+R+ + GAV LD YF++ARGN++A A EMTKWFNTNYH Sbjct: 62 IGDFSLYDHILDTSVLFGFIPERFHHQNGAVSLDTYFSIARGNSNAVASEMTKWFNTNYH 121 Query: 138 YIVPEIGS-LTPQLTENKPLAAYRFAKTQAGIEGKPVIVGLYTFLKLSKGFPAAEIGEVA 196 YIVPEI + TP +TEN+ L Y AK + I+GKPVIVG T LKLSKGF + + Sbjct: 122 YIVPEINAGTTPYITENRLLNLYLEAKKELNIDGKPVIVGPVTLLKLSKGFEKKDFPNLL 181 Query: 197 ERFLPVYIQLLQELEQEGVAWVQIDEPAVVTGLTPEEIALLKTIYGAISAAVPGLKLILQ 256 +P+YI++ +L+ G WVQ+DEP + T L +E+ K Y A AVP L L+LQ Sbjct: 182 RALIPLYIEVFTDLQTAGATWVQVDEPILSTTLDKKELGYFKETYEAFHQAVPNLNLLLQ 241 Query: 257 TYFXXXXXXXXXXXXXVQAIGLDFVHDGGVNLEAIERLGWPAGKLLGAGIIDGRSIWRAD 316 TYF VQ IGLDFV+D G NL ++E+ G+P K+L AG++DGR+IWR D Sbjct: 242 TYFESVDHYQDVAALPVQGIGLDFVYDDGANLASLEKYGFPEDKVLAAGVVDGRNIWRTD 301 Query: 317 PDAKLGLIQKLAAHVPLDRLILQPSSSLLHVPVTVQSEGKLKPAVKQALAFADEKXXXXX 376 D L + L V +RL +QPS SL HVPVTV+ E +L+P +K A++FADEK Sbjct: 302 LDEALQQVNDLLHFVDQERLWIQPSCSLQHVPVTVRQESELEPVLKNAISFADEKLKEVV 361 Query: 377 XXXXXXXXXXXXXXXXXXESREALAAFRALPERGRQDVAEQVRRL-DALPDSRSLPFAER 435 ES EA+ A R + ++++ L D +P R LPF+ER Sbjct: 362 ALVKGVNEGRDAILEEIKESNEAIQALNHSSHRNIDSIKKEIQSLGDDMP-KRPLPFSER 420 Query: 436 VKLQQAKWKLPLLPTTTIGSFPQTAEVRQARLKWRKGVWNEERYDTFVRRQIAEAITLQE 495 +Q+ KWKLPLLPTTTIGS PQT E+R AR KWRKG W E +Y+ F+++ IA+ I +QE Sbjct: 421 QAIQEKKWKLPLLPTTTIGSLPQTKEIRSARQKWRKGEWTESQYEQFIQQNIAKWIKIQE 480 Query: 496 ELGLDVLVHGEFERTDMVEFFGEKLAGYLFTQNGWVQSYGSRCVKPPVIYADVAFIQPMT 555 +L +DVLVHGEFER DMVE+FGEKL G+ FT+ WVQSYGSRCVKPP+I+ DV PMT Sbjct: 481 DLDIDVLVHGEFERNDMVEYFGEKLRGFAFTRFAWVQSYGSRCVKPPIIFGDVDLEAPMT 540 Query: 556 VKESVYAQSLTRLPVKGMLTGPVTILNWSFVRDDLSREEVAKQIALALRHEVQALEDAGI 615 VKES YAQSLT PVKGMLTGPVTI NWSFVR+D+ +V QIALAL+ E+QALE+ I Sbjct: 541 VKESTYAQSLTTRPVKGMLTGPVTIYNWSFVRNDIRPFDVINQIALALKKEIQALEENEI 600 Query: 616 EM 617 M Sbjct: 601 RM 602 >Q9KFP1.1 METE_BACHD 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase EC=2.1.1.14 Length = 756 Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/596 (54%), Positives = 404/596 (67%), Gaps = 5/596 (0%) Query: 22 TSNLGYPRIGKNREWKKTLEAYWSGKIDEQDFLAQMAGIQLQHLQSQQKAGIDLIPVNDF 81 TSNLGYPRIG+NREWKK LE++W+ E+ LA M ++L HL+ QQ+ +DLIPV DF Sbjct: 3 TSNLGYPRIGENREWKKALESFWANDTTEEQLLATMKELRLNHLRVQQEQEVDLIPVGDF 62 Query: 82 TFYDHVLDTAVMFGIIPQRYAYNGGAVPLDLYFAMARGNASAPACEMTKWFNTNYHYIVP 141 T YDHVLD AVMFGIIP+R+ G L YFAMARG+ +A ACEMTKW+NTNYHYIVP Sbjct: 63 TLYDHVLDMAVMFGIIPKRFLQQGDTPTLSTYFAMARGSKNAQACEMTKWYNTNYHYIVP 122 Query: 142 EIGSLTPQLTENKPLAAYRFAKTQAGIEGKPVIVGLYTFLKLSKGFPAAEIGEVAERFLP 201 E+ P+LT+N PL AY AK + GI+GKPVI+G Y+F+KL+KG+ ++ E + LP Sbjct: 123 ELHDAAPRLTKNAPLEAYLEAKNELGIDGKPVILGPYSFVKLAKGYEEDKLQETIQSLLP 182 Query: 202 VYIQLLQELEQEGVAWVQIDEPAVVTGLTPEEIALLKTIYGAISAAVPGLKLILQTYFXX 261 +YIQ++QEL G +Q+DEP++VT ++ E+AL+ IY I+ A+ L LQTYF Sbjct: 183 LYIQVIQELVDAGARSIQVDEPSLVTSISAREMALVTRIYEQINEAIADAPLFLQTYFDA 242 Query: 262 XXXXXXXXXXXVQAIGLDFVHDGGVNLEAIERLGWPAGKLLGAGIIDGRSIWRADPDAKL 321 V+ IGLDFVH G NLEA+ G+P K+L AGIIDGR+IW ++ + Sbjct: 243 VTFYEEVVSLPVKGIGLDFVHGGAKNLEALRTFGFPEDKVLAAGIIDGRNIWISNLRERH 302 Query: 322 GLIQKLAAHVPLDRLILQPSSSLLHVPVTVQSEGKLKPAVKQALAFADEKXXXXXXXXXX 381 L+ +L HV DRL+LQPS SLLHVPVT + E KL P + LAFA+EK Sbjct: 303 ELVHQLEQHVAKDRLVLQPSCSLLHVPVTTKREEKLDPTLLGVLAFANEKLTELHTLKQL 362 Query: 382 XXXXXXXXXXXXXESREALAAFRALPERGRQDVAEQVRRLDALPDSRSLPFAERVKLQQA 441 + +ALA AL + G + A L+ R F ER LQ+ Sbjct: 363 AAGNEAEVKEALEANDDALA---ALEKSGWRSGAATSHNLEN--KKRPQSFNERRPLQEE 417 Query: 442 KWKLPLLPTTTIGSFPQTAEVRQARLKWRKGVWNEERYDTFVRRQIAEAITLQEELGLDV 501 KW+LPLLPTTTIGSFPQT +VR+ R WRKG + Y+ ++ I + I +QEELGLDV Sbjct: 418 KWQLPLLPTTTIGSFPQTKDVRRTRSLWRKGELSTVEYERTMKSYIEKWINIQEELGLDV 477 Query: 502 LVHGEFERTDMVEFFGEKLAGYLFTQNGWVQSYGSRCVKPPVIYADVAFIQPMTVKESVY 561 LVHGEFER DMVEFFGEKL G+ FT NGWVQSYGSRCVKPP+IY +V+F +PMTV E+VY Sbjct: 478 LVHGEFERNDMVEFFGEKLDGFAFTANGWVQSYGSRCVKPPIIYGNVSFTEPMTVAETVY 537 Query: 562 AQSLTRLPVKGMLTGPVTILNWSFVRDDLSREEVAKQIALALRHEVQALEDAGIEM 617 AQSLT PVKGMLTGPVTILNWSFVRDDL +A QIA AL HEV ALE+AGIEM Sbjct: 538 AQSLTDKPVKGMLTGPVTILNWSFVRDDLPLTVIAHQIAEALTHEVTALEEAGIEM 593 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,564,729,348 Number of extensions: 149084597 Number of successful extensions: 325079 Number of sequences better than 1.0e-05: 1082 Number of HSP's gapped: 320235 Number of HSP's successfully gapped: 1247 Length of query: 623 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 481 Effective length of database: 1,722,912,073 Effective search space: 828720707113 Effective search space used: 828720707113 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 134 (56.2 bits)