BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0349.0015.p (287 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K6Y8.1 B3K6Y8_9BACI Putative uncharacterized protein 466 e-129 B1DMI0.1 B1DMI0_9BACL Putative uncharacterized protein 416 e-114 B4BE28.1 B4BE28_CLOTM Putative uncharacterized protein 382 e-104 B8I5M6.1 B8I5M6_CLOCE Putative uncharacterized protein 382 e-104 A3DC37.1 A3DC37_CLOTH Putative uncharacterized protein 380 e-104 >B3K6Y8.1 B3K6Y8_9BACI Putative uncharacterized protein Length = 287 Score = 466 bits (1199), Expect = e-129, Method: Compositional matrix adjust. Identities = 217/287 (75%), Positives = 241/287 (83%) Query: 1 MYIASDWKDYEVIDTGGGEKLERWGDIILRRPDPQIIWPLAHETAKWRDVHGHYHRSSAG 60 MY+A W+DYEVIDTGGGEKLERWGD+ILRRPDPQIIWP+ E +WR+VHGHYHRSS+G Sbjct: 1 MYVAQGWQDYEVIDTGGGEKLERWGDVILRRPDPQIIWPIEREDGQWRNVHGHYHRSSSG 60 Query: 61 GGQWEMKKTIPDNWKISYGKLKFHLRPTNFKHTGLFPEQAANWRWMMDKIAEAGRPVSVL 120 GGQW+MKK +PD W ISY +LKFH+RPTNFKHTGLFPEQAANWRWMMDKIA AGRP+SVL Sbjct: 61 GGQWDMKKQLPDRWTISYDQLKFHIRPTNFKHTGLFPEQAANWRWMMDKIASAGRPISVL 120 Query: 121 NLFXXXXXXXXXXXXXXXXXXXXXXXKGMVQWAKENVQLSGLAERPVRFITDDVFKFVQR 180 NLF KGMVQWAKEN LSGLA+RP+R+ITDDVFKFVQR Sbjct: 121 NLFAYTGGATVAAASAGAQVVHVDAAKGMVQWAKENAALSGLADRPIRYITDDVFKFVQR 180 Query: 181 EQRRGSKYDAIIMDPPSYGRGPGGEMWKLEASLYPFLESCLEIMSDRPLFMLINSYTTGI 240 EQRRG+KYDAIIMDPPSYGRGP GE WKLE SLYPFLESC+ I+SD PLFMLINSYTTGI Sbjct: 181 EQRRGNKYDAIIMDPPSYGRGPSGETWKLEQSLYPFLESCMSIVSDNPLFMLINSYTTGI 240 Query: 241 SPTVLRNMLSMTMGKRYGGKLTSGEIGLPITASGMNLPCGILGRWEA 287 SPTVL NML+MTM +YGG +++GEIGLPIT SGMNLPCGILGRWE+ Sbjct: 241 SPTVLNNMLTMTMKPKYGGLISAGEIGLPITRSGMNLPCGILGRWES 287 >B1DMI0.1 B1DMI0_9BACL Putative uncharacterized protein Length = 288 Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust. Identities = 191/287 (66%), Positives = 223/287 (77%) Query: 1 MYIASDWKDYEVIDTGGGEKLERWGDIILRRPDPQIIWPLAHETAKWRDVHGHYHRSSAG 60 MY+A W DYEVIDTG G+KLERWG ILRRPDPQIIWP+A+ET W+ GHYHRSS+G Sbjct: 1 MYVADKWVDYEVIDTGAGDKLERWGQYILRRPDPQIIWPIANETGAWKKADGHYHRSSSG 60 Query: 61 GGQWEMKKTIPDNWKISYGKLKFHLRPTNFKHTGLFPEQAANWRWMMDKIAEAGRPVSVL 120 GG+W+ K ++P+ W I+YG+LKFH++PT+FKHTGLFPEQA NW WMMDKI AGRP+ VL Sbjct: 61 GGEWQFKSSLPERWTIAYGELKFHIKPTSFKHTGLFPEQAVNWSWMMDKIRSAGRPIRVL 120 Query: 121 NLFXXXXXXXXXXXXXXXXXXXXXXXKGMVQWAKENVQLSGLAERPVRFITDDVFKFVQR 180 NLF KGMVQWAKEN QLSGL P+R+ITDDVFKFVQR Sbjct: 121 NLFAYSGGATVAAAAAGAEVVHVDASKGMVQWAKENAQLSGLESAPIRYITDDVFKFVQR 180 Query: 181 EQRRGSKYDAIIMDPPSYGRGPGGEMWKLEASLYPFLESCLEIMSDRPLFMLINSYTTGI 240 EQRRG +YDAIIMDPPSYGRGP GE WKLE +L+PFLE C I+SD PLF+LINSYTTG+ Sbjct: 181 EQRRGRQYDAIIMDPPSYGRGPNGETWKLEENLFPFLEFCTTILSDNPLFLLINSYTTGL 240 Query: 241 SPTVLRNMLSMTMGKRYGGKLTSGEIGLPITASGMNLPCGILGRWEA 287 SPTVL N+L TM ++GG + GEIGLPIT SG++LPCGILGRWE+ Sbjct: 241 SPTVLHNLLHTTMKGKFGGMINCGEIGLPITQSGLHLPCGILGRWES 287 >B4BE28.1 B4BE28_CLOTM Putative uncharacterized protein Length = 291 Score = 382 bits (981), Expect = e-104, Method: Compositional matrix adjust. Identities = 174/287 (60%), Positives = 212/287 (73%) Query: 1 MYIASDWKDYEVIDTGGGEKLERWGDIILRRPDPQIIWPLAHETAKWRDVHGHYHRSSAG 60 M +A DWKDYE+IDTG GEKLERWG ILRRPDPQIIWP+ +E W+ HYHRS +G Sbjct: 2 MLLADDWKDYELIDTGNGEKLERWGKYILRRPDPQIIWPIRNENGLWKKADAHYHRSRSG 61 Query: 61 GGQWEMKKTIPDNWKISYGKLKFHLRPTNFKHTGLFPEQAANWRWMMDKIAEAGRPVSVL 120 GG WE K+ +P+ W ISY L F++ PT FKHTGLFPEQA NW+WM+DKI A R ++VL Sbjct: 62 GGSWEFKRKLPERWTISYHDLSFYIEPTGFKHTGLFPEQAVNWKWMIDKIRSASRNINVL 121 Query: 121 NLFXXXXXXXXXXXXXXXXXXXXXXXKGMVQWAKENVQLSGLAERPVRFITDDVFKFVQR 180 NLF KGMVQ AKEN+ LSGLA+R VRFI DDV KFVQR Sbjct: 122 NLFAYTGGATVACAYANASVCHVDAAKGMVQRAKENLALSGLADRSVRFIVDDVIKFVQR 181 Query: 181 EQRRGSKYDAIIMDPPSYGRGPGGEMWKLEASLYPFLESCLEIMSDRPLFMLINSYTTGI 240 E+RRG +YDA+IMDPPSYGRGP GE+WK+E LY F+E C++++S +PLF LINSYT G Sbjct: 182 EKRRGRQYDAVIMDPPSYGRGPRGEVWKIEDELYGFVEQCIDVLSPKPLFFLINSYTAGF 241 Query: 241 SPTVLRNMLSMTMGKRYGGKLTSGEIGLPITASGMNLPCGILGRWEA 287 SPTVL N+L MT+ KR+GG +T GE+G+P+++SG+ LPCGI RWEA Sbjct: 242 SPTVLANILKMTVVKRFGGVVTCGEVGIPVSSSGIVLPCGIYARWEA 288 >B8I5M6.1 B8I5M6_CLOCE Putative uncharacterized protein Length = 287 Score = 382 bits (980), Expect = e-104, Method: Compositional matrix adjust. Identities = 175/286 (61%), Positives = 213/286 (74%), Gaps = 1/286 (0%) Query: 1 MYIASDWKDYEVIDTGGGEKLERWGDIILRRPDPQIIWPLAHETAKWRDVHGHYHRSSAG 60 M +A +WK+YE+I+TG GEKLERWG+IILRRPDPQIIWP+ + W HYHRS +G Sbjct: 1 MLLADEWKEYELIETGDGEKLERWGNIILRRPDPQIIWPIKDKKV-WDRADAHYHRSQSG 59 Query: 61 GGQWEMKKTIPDNWKISYGKLKFHLRPTNFKHTGLFPEQAANWRWMMDKIAEAGRPVSVL 120 GGQWE KK +P W IS+ LKF++ PT FKHTGLFPEQA NW+WM++ I +A RP+ VL Sbjct: 60 GGQWEFKKKVPKRWTISFNDLKFYIEPTGFKHTGLFPEQAVNWKWMINSIQKANRPIRVL 119 Query: 121 NLFXXXXXXXXXXXXXXXXXXXXXXXKGMVQWAKENVQLSGLAERPVRFITDDVFKFVQR 180 NLF KGMV WAKEN+ LSGLA+RPVRFITDD KFVQR Sbjct: 120 NLFAYTGGATVATAYAGAEVCHVDAAKGMVNWAKENLALSGLADRPVRFITDDCMKFVQR 179 Query: 181 EQRRGSKYDAIIMDPPSYGRGPGGEMWKLEASLYPFLESCLEIMSDRPLFMLINSYTTGI 240 E RRG KYD IIMDPPSYGRGPGGE+WK+E SLY F+E C+ ++SD+PLF L+NSYTTG Sbjct: 180 EIRRGKKYDGIIMDPPSYGRGPGGEIWKIEDSLYGFVEQCMGLLSDKPLFFLVNSYTTGF 239 Query: 241 SPTVLRNMLSMTMGKRYGGKLTSGEIGLPITASGMNLPCGILGRWE 286 SPTVL N+L T+G+R+ G +SGE+G+P++ SG+ LPCGI GRWE Sbjct: 240 SPTVLSNILKKTIGRRFKGTYSSGEVGIPVSNSGLVLPCGIYGRWE 285 >A3DC37.1 A3DC37_CLOTH Putative uncharacterized protein Length = 291 Score = 380 bits (977), Expect = e-104, Method: Compositional matrix adjust. Identities = 173/287 (60%), Positives = 211/287 (73%) Query: 1 MYIASDWKDYEVIDTGGGEKLERWGDIILRRPDPQIIWPLAHETAKWRDVHGHYHRSSAG 60 M +A DWKDYE+IDTG GEKLERWG ILRRPDPQIIWP+ +E W+ HYHRS +G Sbjct: 2 MLLADDWKDYELIDTGNGEKLERWGKYILRRPDPQIIWPIRNENGLWKKADAHYHRSRSG 61 Query: 61 GGQWEMKKTIPDNWKISYGKLKFHLRPTNFKHTGLFPEQAANWRWMMDKIAEAGRPVSVL 120 GG WE K+ +P+ W ISY L F++ PT FKHTGLFPEQ NW+WM+DKI A R ++VL Sbjct: 62 GGSWEFKRKLPERWTISYHDLSFYIEPTGFKHTGLFPEQVVNWKWMIDKIRSASRNINVL 121 Query: 121 NLFXXXXXXXXXXXXXXXXXXXXXXXKGMVQWAKENVQLSGLAERPVRFITDDVFKFVQR 180 NLF KGMVQ AKEN+ LSGLA+R VRFI DDV KFVQR Sbjct: 122 NLFAYTGGATVACAYANASVCHVDAAKGMVQRAKENLALSGLADRSVRFIVDDVIKFVQR 181 Query: 181 EQRRGSKYDAIIMDPPSYGRGPGGEMWKLEASLYPFLESCLEIMSDRPLFMLINSYTTGI 240 E+RRG +YDA+IMDPPSYGRGP GE+WK+E LY F+E C++++S +PLF LINSYT G Sbjct: 182 EKRRGRQYDAVIMDPPSYGRGPRGEVWKIEDELYGFVEQCIDVLSPKPLFFLINSYTAGF 241 Query: 241 SPTVLRNMLSMTMGKRYGGKLTSGEIGLPITASGMNLPCGILGRWEA 287 SPTVL N+L MT+ KR+GG +T GE+G+P+++SG+ LPCGI RWEA Sbjct: 242 SPTVLANILKMTVVKRFGGVVTCGEVGIPVSSSGIVLPCGIYARWEA 288 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.451 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,842,728,423 Number of extensions: 75617517 Number of successful extensions: 150811 Number of sequences better than 1.0e-05: 138 Number of HSP's gapped: 150645 Number of HSP's successfully gapped: 138 Length of query: 287 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 153 Effective length of database: 1,798,280,193 Effective search space: 275136869529 Effective search space used: 275136869529 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)