BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0348.0011.p (271 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KF73.1 B3KF73_9BACI Putative uncharacterized protein 421 e-116 B1YFG5.1 B1YFG5_EXIS2 Putative uncharacterized protein 274 5e-72 B7VSM3.1 B7VSM3_VIBSL Putative uncharacterized protein 226 1e-57 C1XWP0.1 C1XWP0_9DEIN Putative uncharacterized protein 222 3e-56 A4BG58.1 A4BG58_9GAMM Putative uncharacterized protein 209 2e-52 >B3KF73.1 B3KF73_9BACI Putative uncharacterized protein Length = 258 Score = 421 bits (1081), Expect = e-116, Method: Compositional matrix adjust. Identities = 206/257 (80%), Positives = 225/257 (87%) Query: 14 VLRTELLLQRLDEIGQSLERMXXXXXXXXXXXXXXETERLDEYSDLDFFVIVKPGEKSRF 73 +LRTELLLQRL EIG+SLE ET RLDEYSDLDFFVIV+P EK+R+ Sbjct: 1 MLRTELLLQRLGEIGKSLETKGGALLLLGVGSVGVETGRLDEYSDLDFFVIVEPREKNRY 60 Query: 74 IGRLDWLEGAHPLAYSFKNTDDGYKVLFEDGVFGEYAVFEEWELADAAYTEGRIIWKDPA 133 I RLDWLE HPLAY+FKN+D GYKVLFEDG+FGEYAVFEEWELA+A YTEGR+IWK+P Sbjct: 61 IDRLDWLEDVHPLAYAFKNSDVGYKVLFEDGIFGEYAVFEEWELANATYTEGRVIWKNPL 120 Query: 134 YSNTAIAKPVNPIPGQKSDSLDFPLNEALTNLYVGLCRYARGERLSATRFVQGYAIDRIL 193 YSNTAIAKP NP+P K DSLDFPLNEALTNLYVGL R+ARGERLSATRFVQGYA+DRIL Sbjct: 121 YSNTAIAKPSNPVPNLKVDSLDFPLNEALTNLYVGLGRFARGERLSATRFVQGYAVDRIL 180 Query: 194 SVLHLLEQEEDYFPDPFGNERRLEKRYPRFAEIIGDMIQGYNHVPESALRILNFLEEVYP 253 SVLHLLEQE DYFPDPFGNERRLE+RYPRFAEIIGDMIQGY+HVPESALRILNF+EEVYP Sbjct: 181 SVLHLLEQEVDYFPDPFGNERRLERRYPRFAEIIGDMIQGYDHVPESALRILNFIEEVYP 240 Query: 254 VNRRLSDEIRRLANVNC 270 VNR+LSDEIRRLAN+ C Sbjct: 241 VNRKLSDEIRRLANLTC 257 >B1YFG5.1 B1YFG5_EXIS2 Putative uncharacterized protein Length = 263 Score = 274 bits (701), Expect = 5e-72, Method: Compositional matrix adjust. Identities = 132/251 (52%), Positives = 174/251 (69%) Query: 16 RTELLLQRLDEIGQSLERMXXXXXXXXXXXXXXETERLDEYSDLDFFVIVKPGEKSRFIG 75 R + LL RLD+IGQ LE E ERLD YSDLDFF+I KPG+K RF+ Sbjct: 4 RQQTLLARLDQIGQQLEHTNNAWLLLGLGSVGQELERLDRYSDLDFFIITKPGQKQRFLQ 63 Query: 76 RLDWLEGAHPLAYSFKNTDDGYKVLFEDGVFGEYAVFEEWELADAAYTEGRIIWKDPAYS 135 +LDWLE HPL++ F+NT DG+K+LF DG++GE A+FE E+ + A++ GRI+W+D + Sbjct: 64 QLDWLESVHPLSFIFQNTVDGFKLLFADGIYGECAIFELDEMPEIAFSPGRIVWQDSTFL 123 Query: 136 NTAIAKPVNPIPGQKSDSLDFPLNEALTNLYVGLCRYARGERLSATRFVQGYAIDRILSV 195 + P + D+LDF LNEALTNLYVGLCRYARGERLS + V+ +A ++LSV Sbjct: 124 GVDLTVSKQAPPPIRRDTLDFALNEALTNLYVGLCRYARGERLSGLQLVEQHAFSQLLSV 183 Query: 196 LHLLEQEEDYFPDPFGNERRLEKRYPRFAEIIGDMIQGYNHVPESALRILNFLEEVYPVN 255 LHLLE E Y+PD +GNERR E+R+P+ E D++QGY VPESAL +L +LE++ PVN Sbjct: 184 LHLLESEVVYYPDQYGNERRAEQRFPQAQERFADVLQGYTRVPESALALLEWLEQIQPVN 243 Query: 256 RRLSDEIRRLA 266 ++ EIRRLA Sbjct: 244 SSMAAEIRRLA 254 >B7VSM3.1 B7VSM3_VIBSL Putative uncharacterized protein Length = 266 Score = 226 bits (577), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 114/255 (44%), Positives = 159/255 (62%), Gaps = 2/255 (0%) Query: 13 HVLRTELLLQRLDEIGQSLERMXXXXXXXXXXXXXXETERLDEYSDLDFFVIVKPGEKSR 72 H+ E LLQRLD IG+SLE ETERLD+YSD+DFF IV+ G K Sbjct: 11 HINTPEKLLQRLDAIGESLEASGQAHTLLGLGSVGIETERLDQYSDVDFFAIVQTGHKQY 70 Query: 73 FIGRLDWLEGAHPLAYSFKNTDDGYKVLFEDGVFGEYAVFEEWELADAAYTEGRIIWKDP 132 F+ L WL HP+ Y+ +NT DGYKVL+ DG+F E+AVFE ELA + EGRI+W++ Sbjct: 71 FLDSLHWLSDIHPIDYAVRNTVDGYKVLYADGIFCEFAVFEPHELAHIPFAEGRIVWQEA 130 Query: 133 AYSNTAIAKPVNPIPGQKSDSLDFPLNEALTNLYVGLCRYARGERLSATRFVQGYAIDRI 192 + PV + +++S ++ + EALTNLYVG+ RY RGE+LS +RFVQ YA+DR+ Sbjct: 131 DFDTQCCVPPVKGVA--ETNSQEWIIGEALTNLYVGMSRYNRGEKLSGSRFVQSYALDRL 188 Query: 193 LSVLHLLEQEEDYFPDPFGNERRLEKRYPRFAEIIGDMIQGYNHVPESALRILNFLEEVY 252 + ++ E+ + F D F ++RRLE R+P+FA+++ QGY ESAL L FL + Sbjct: 189 IDLVDQTERSKPEFVDEFMSDRRLEARFPKFAQLLPTFTQGYERTAESALAQLAFLNTHF 248 Query: 253 PVNRRLSDEIRRLAN 267 VN+ + D I L + Sbjct: 249 TVNQAMCDRITELCS 263 >C1XWP0.1 C1XWP0_9DEIN Putative uncharacterized protein Length = 255 Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 113/249 (45%), Positives = 159/249 (63%), Gaps = 1/249 (0%) Query: 20 LLQRLDEIGQSLERMXXXXXXXXXXXXXXETERLDEYSDLDFFVIVKPGEKSRFIGRLDW 79 LL+RL+ IG+SL+ E +RLDE+SDLDFF +V+PG+K+R++ L W Sbjct: 7 LLERLEAIGRSLQASGHALALIGLGSVGLERDRLDEHSDLDFFALVEPGQKARYLQDLSW 66 Query: 80 LEGAHPLAYSFKNTDDGYKVLFEDGVFGEYAVFEEWELADAAYTEGRIIWKDPAYSNTAI 139 L P+ + F NT DGYK+L+ DG+F E+AVFE EL + G+++W A + ++ Sbjct: 67 LSDVAPVVFLFPNTADGYKLLYADGIFCEFAVFEPQELEQIPFAAGQVVWSR-AGVDASV 125 Query: 140 AKPVNPIPGQKSDSLDFPLNEALTNLYVGLCRYARGERLSATRFVQGYAIDRILSVLHLL 199 A P G +++ L EALTNLYVGL RY RGE+LSA RFVQG+A+DR+L + +L Sbjct: 126 ATPTRRAMGGARPGMEWHLGEALTNLYVGLKRYRRGEKLSAMRFVQGFALDRVLELASVL 185 Query: 200 EQEEDYFPDPFGNERRLEKRYPRFAEIIGDMIQGYNHVPESALRILNFLEEVYPVNRRLS 259 E E+ DPF NERRLE+R+PR + + + QGY PE+AL L FLE+ + VN ++ Sbjct: 186 ETEQPARRDPFNNERRLEQRFPRISARLSEFAQGYERTPEAALAQLAFLEQHFEVNAAMA 245 Query: 260 DEIRRLANV 268 EIR LA + Sbjct: 246 REIRALAAL 254 >A4BG58.1 A4BG58_9GAMM Putative uncharacterized protein Length = 254 Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 115/249 (46%), Positives = 149/249 (59%), Gaps = 2/249 (0%) Query: 20 LLQRLDEIGQSLERMXXXXXXXXXXXXXXETERLDEYSDLDFFVIVKPGEKSRFIGRLDW 79 L RL EI + + E +RLD YSDLDFF IV PG KS FI L W Sbjct: 7 LKNRLHEIAHQIAQSGHAHALLGLGSAGNEQDRLDTYSDLDFFAIVHPGFKSHFINDLHW 66 Query: 80 LEGAHPLAYSFKNTDDGYKVLFEDGVFGEYAVFEEWELADAAYTEGRIIWKDPAYSNTAI 139 L Y F+NT DGYK L+ DG+F E+AVFE ELA +T GR+IW + + NT + Sbjct: 67 LTDIADPGYYFRNTKDGYKFLYADGIFCEFAVFEPQELATIPFTGGRLIWAEDGF-NTDV 125 Query: 140 AKPVNPIPG-QKSDSLDFPLNEALTNLYVGLCRYARGERLSATRFVQGYAIDRILSVLHL 198 +PV+ Q+SD+ D+ + EALTNLYVGL RY RGE+LSA +FVQ YA+DR++ +LHL Sbjct: 126 IQPVSTQGQYQRSDNTDWIIGEALTNLYVGLGRYCRGEKLSAMKFVQSYALDRLIDLLHL 185 Query: 199 LEQEEDYFPDPFGNERRLEKRYPRFAEIIGDMIQGYNHVPESALRILNFLEEVYPVNRRL 258 DPF +RRLE+ YP ++ QGY P SAL L +LE+ Y +N + Sbjct: 186 QNGPRTGQVDPFMPDRRLEQHYPNAEPMLASFCQGYLKTPTSALAQLEWLEQHYDINPVM 245 Query: 259 SDEIRRLAN 267 + EIRRLA+ Sbjct: 246 ATEIRRLAD 254 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.142 0.431 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,611,362,196 Number of extensions: 66979924 Number of successful extensions: 126024 Number of sequences better than 1.0e-05: 11 Number of HSP's gapped: 126008 Number of HSP's successfully gapped: 11 Length of query: 271 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 138 Effective length of database: 1,807,701,208 Effective search space: 249462766704 Effective search space used: 249462766704 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 130 (54.7 bits)