BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0348.0010.p
         (360 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K8I7.1 B3K8I7_9BACI Putative uncharacterized protein                392   e-107

>B3K8I7.1 B3K8I7_9BACI Putative uncharacterized protein
          Length = 357

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 190/356 (53%), Positives = 248/356 (69%)

Query: 1   VELDALYHNYLNLKFGRGLPLLKTGRFEYALCEDGSTELFLVGRKNESFTEWTSDLRPAD 60
           ++L  LY+ YLNLKF RGLP    G F Y L EDG   LF   R +E+F EWT +L+P D
Sbjct: 1   MKLQFLYNEYLNLKFNRGLPSTPIGGFAYGLLEDGGAALFFAERNDEAFVEWTYELQPRD 60

Query: 61  PHYTDTTGRAPVLASRFGQLDVYGEQVLDYLLLTINATTSIAPIHPYNVMNDRMKHYCFF 120
            HY       PVL+  F QLDVY E V  YLL TINATTSIA I+PYN MND MK+Y FF
Sbjct: 61  AHYVAIPDWKPVLSDSFKQLDVYDELVFYYLLFTINATTSIAKINPYNAMNDFMKNYAFF 120

Query: 121 QLAQWAYLSMLSDEQKAGLRDFFFWFYLYAHPVNGETLDAFSFRGPDLIHTQTGIRVQDY 180
           QL+Q   ++ L++EQK  LRDFFF+FYLYAHPVN ETL AFSFRG DLIHT+T I V+ Y
Sbjct: 121 QLSQLNGVTRLNEEQKLQLRDFFFFFYLYAHPVNEETLYAFSFRGQDLIHTKTNIHVEHY 180

Query: 181 FEAYHDHYAHQHTAYNDCLTLSPQEIEACCRLTLQMLEVVEGRSSRLKLPPEAGLEPALR 240
              YHD+Y+     + D + ++P EI+AC  L L++L  +EG+S++L++PPE GLE  LR
Sbjct: 181 VTTYHDYYSEHLDKHKDQIFIAPPEIQACQDLMLELLRSIEGKSAKLEMPPEEGLEALLR 240

Query: 241 LINQADEFLAAYARNRSEVFGCMQDTLTGVPSTPYREHIISMLLHNYVCYILYFDFDQIV 300
           LIN AD F+  ++ +++ +FG M D L+   STPYR+H   MLL NY CY+LYF+F+QI 
Sbjct: 241 LINDADGFMHMHSVDKTTLFGIMSDFLSDARSTPYRDHCFRMLLQNYACYVLYFEFEQIH 300

Query: 301 ELVEFFRDDPPLCRVIVNRMFTETIFIQKILWQNRIDLHNYANVTALFDENAREIY 356
            LV++F+D P  C  ++N +FT+ IF+QKIL  +RI++ +Y NV A F+E AR IY
Sbjct: 301 HLVDYFKDTPVWCERMINSLFTDAIFMQKILRHHRIEIADYTNVIAFFNEEARRIY 356


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.326    0.141    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 2,225,651,057
Number of extensions: 93072497
Number of successful extensions: 228146
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 228147
Number of HSP's successfully gapped: 1
Length of query: 360
Length of database: 3,060,696,203
Length adjustment: 137
Effective length of query: 223
Effective length of database: 1,770,017,148
Effective search space: 394713824004
Effective search space used: 394713824004
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 132 (55.5 bits)