BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0346.0076.p (625 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KF49.1 B3KF49_9BACI Dehydratase, YjhG/YagF family EC=4.2.1.9 900 0.0 Q5WJ07.1 Q5WJ07_BACSK Dihydroxy-acid dehydratase EC=4.2.1.9 872 0.0 B9XB68.1 B9XB68_9BACT Dehydratase, YjhG/YagF family EC=4.2.1.9 842 0.0 B6F7T9.1 B6F7T9_9ENTR Putative uncharacterized protein 839 0.0 A4W613.1 A4W613_ENT38 Dihydroxy-acid dehydratase EC=4.2.1.9 833 0.0 >B3KF49.1 B3KF49_9BACI Dehydratase, YjhG/YagF family EC=4.2.1.9 Length = 658 Score = 900 bits (2326), Expect = 0.0, Method: Compositional matrix adjust. Identities = 433/624 (69%), Positives = 519/624 (83%), Gaps = 2/624 (0%) Query: 1 MLRSAPSGEIFGMTQNSGMGWNPLLLNRPQYLILGTMGGIRREDGSPLALGYHTGHWEIG 60 +LR+APSG++FGM+QN GMGW P LN Q+LIL T GGIR EDGSP ALGYHTGHWE+G Sbjct: 36 LLRNAPSGDLFGMSQNVGMGWKPGELNGKQFLILSTQGGIRNEDGSPAALGYHTGHWEVG 95 Query: 61 LMMEEVAQEITEQQGIPFAGYVSDPCXXXXXXXXXXGMFDSLPYRNDAAMVLRRLIRSLP 120 L+M+ A+EI+++ GIPFAGYVSDPC GMFDSLPYRNDAA+V RRLIRSLP Sbjct: 96 LLMKAAAEEISDRGGIPFAGYVSDPCDGRSQGTT--GMFDSLPYRNDAALVFRRLIRSLP 153 Query: 121 TRKGVLGVATCDKGLPAMMVALAGMRDLPGIIVPGGVSLPPVHGEDAGKVQSIGARFSNG 180 TRKGV+GVATCDKGLPAMM+ALAGM LPG+IVPGGV+LPPV GEDAGK+Q+IGAR+ +G Sbjct: 154 TRKGVIGVATCDKGLPAMMLALAGMPQLPGVIVPGGVTLPPVDGEDAGKIQTIGARYVSG 213 Query: 181 ELSLEEAADLGCRACATPGGGCQFLGTAATAQVVAEALGLSVPHSALAPSGQPVWKNMGR 240 ELSLE AA+LGCRACATPGGGCQFLGTAATAQVVAEA+G++VPH+ALAPSGQP+W M R Sbjct: 214 ELSLEAAAELGCRACATPGGGCQFLGTAATAQVVAEAMGMTVPHAALAPSGQPIWIEMAR 273 Query: 241 QSARALLHMEHSGMVMKDILTNQAIMNAMVVHAAFGGSTNXXXXXXXXXXXXXXRIPTVQ 300 QS+RAL+ ME +G+ M D++T+ AI NAM VHAAFGGSTN +P VQ Sbjct: 274 QSSRALMAMESNGLRMADVVTDAAIRNAMAVHAAFGGSTNLLLHIPAIAHAAGLNVPAVQ 333 Query: 301 DWNAVNRRVPRLVSVLPNGPVPHPTIRVFLAGGVPEVMLYLRRLGLIDDSVRTVTGRTLG 360 DW VN+ VPRLVS LPNGP+ HPTIRVF AGGVPEVML+LR+LG++D+SV TVTG TL Sbjct: 334 DWIQVNKHVPRLVSALPNGPIFHPTIRVFQAGGVPEVMLHLRQLGVLDESVLTVTGTTLS 393 Query: 361 ENLDWWETSQRRKDMRQRLQEADGIDPDTVIMSPREAKRQGLASTMTFPIGNLAPEGSVI 420 E LDWWE+S+RR +R++L+E DGIDPD+VIMS ++R G+ ST+TFP GN+APEGSVI Sbjct: 394 EVLDWWESSERRHLLRKQLKEKDGIDPDSVIMSVEYSQRLGITSTVTFPTGNIAPEGSVI 453 Query: 421 KSAAIDPSVLDSEGVYRHVGRVKVFTAEKDAIRSIKDGLIRAGDILAVIGRGPSGTGMEE 480 KS +IDP+VLD++GVYRH GR KVFT E++AIR+IK G + AGD++ ++GRGPSGTGMEE Sbjct: 454 KSTSIDPTVLDNQGVYRHKGRAKVFTTEREAIRAIKTGGVLAGDVVVLLGRGPSGTGMEE 513 Query: 481 TYQLTSALKHLPFGKYVTLITDARFSGVSTGACIGHIGPEALAGGPLGRLRDGDWVEVIV 540 TYQLTSALKHL FGKYV+LITDARFSGVSTGACIGH+GPEALAGGP+G+LR+GD ++++V Sbjct: 514 TYQLTSALKHLSFGKYVSLITDARFSGVSTGACIGHVGPEALAGGPIGKLRNGDLIDIVV 573 Query: 541 DTVKLEGSVNLIGDGEQPGSPEAGVDILAARTAHPLLAVDPGLPDDTRLWAALQAVSGGT 600 D LEGS+N +G+GE SPE G ILA R HP + D LPDDTRLWAALQ+VSGGT Sbjct: 574 DRNTLEGSMNFVGEGEIEVSPEEGALILAQRPFHPDMRPDEALPDDTRLWAALQSVSGGT 633 Query: 601 WQGCVYDTDKIITALEAGRQALGW 624 W+G VYD ++IITALEAG++ LGW Sbjct: 634 WRGNVYDVERIITALEAGKKVLGW 657 >Q5WJ07.1 Q5WJ07_BACSK Dihydroxy-acid dehydratase EC=4.2.1.9 Length = 660 Score = 872 bits (2253), Expect = 0.0, Method: Compositional matrix adjust. Identities = 418/622 (67%), Positives = 505/622 (81%), Gaps = 2/622 (0%) Query: 1 MLRSAPSGEIFGMTQNSGMGWNPLLLNRPQYLILGTMGGIRREDGSPLALGYHTGHWEIG 60 ML +PSG++FG++QN GMGW P L Q LILGT GGIR E+G+P+ALGYHTGHWEIG Sbjct: 34 MLLDSPSGDLFGLSQNVGMGWAPSRLLGKQILILGTQGGIRHENGAPIALGYHTGHWEIG 93 Query: 61 LMMEEVAQEITEQQGIPFAGYVSDPCXXXXXXXXXXGMFDSLPYRNDAAMVLRRLIRSLP 120 L+M+E A+EI Q G+PFAG+VSDPC GMFDSLP+RNDAA+V RRLIRSLP Sbjct: 94 LLMKEAAEEIRRQGGVPFAGFVSDPCDGRSQGTT--GMFDSLPFRNDAAIVYRRLIRSLP 151 Query: 121 TRKGVLGVATCDKGLPAMMVALAGMRDLPGIIVPGGVSLPPVHGEDAGKVQSIGARFSNG 180 TR+ V+GVATCDKGLPAMMVALA M DLP IIVPGGV+LPP +GEDAGK+Q+IGAR++N Sbjct: 152 TRRAVIGVATCDKGLPAMMVALASMHDLPTIIVPGGVTLPPTNGEDAGKIQTIGARYANN 211 Query: 181 ELSLEEAADLGCRACATPGGGCQFLGTAATAQVVAEALGLSVPHSALAPSGQPVWKNMGR 240 E++L+EAADLGCRACATPGGGCQFLGTA T+QVVAEA+G+++PHSALAPSGQP+W M R Sbjct: 212 EITLQEAADLGCRACATPGGGCQFLGTAGTSQVVAEAMGIALPHSALAPSGQPIWMEMAR 271 Query: 241 QSARALLHMEHSGMVMKDILTNQAIMNAMVVHAAFGGSTNXXXXXXXXXXXXXXRIPTVQ 300 QSARA L ME G+ KDI+T++AI NAMVVHAAFGGSTN +IPTV+ Sbjct: 272 QSARAALEMEKKGLSTKDIMTDKAIENAMVVHAAFGGSTNLLLHIPAIAHAANCKIPTVE 331 Query: 301 DWNAVNRRVPRLVSVLPNGPVPHPTIRVFLAGGVPEVMLYLRRLGLIDDSVRTVTGRTLG 360 DW +N+++PRLV VLPNGPV H T++VFLAGGVPEVML+LR+LG++ + V+TVTG TLG Sbjct: 332 DWTRINKKIPRLVDVLPNGPVGHTTVKVFLAGGVPEVMLHLRKLGVLHEDVQTVTGETLG 391 Query: 361 ENLDWWETSQRRKDMRQRLQEADGIDPDTVIMSPREAKRQGLASTMTFPIGNLAPEGSVI 420 NLDWWE S+RR M+++L E DGIDPD +IM P +AK +GL ST+TFP GN+APEGSVI Sbjct: 392 ANLDWWEKSERRALMKKQLLETDGIDPDDIIMDPIKAKERGLTSTVTFPKGNIAPEGSVI 451 Query: 421 KSAAIDPSVLDSEGVYRHVGRVKVFTAEKDAIRSIKDGLIRAGDILAVIGRGPSGTGMEE 480 KS +IDPSV+ +G+YRH G+ KVFT+EK AI++IK G I AGDI+ V+G GPSGTGMEE Sbjct: 452 KSTSIDPSVVGEDGIYRHTGKAKVFTSEKSAIKAIKHGSIEAGDIMVVMGGGPSGTGMEE 511 Query: 481 TYQLTSALKHLPFGKYVTLITDARFSGVSTGACIGHIGPEALAGGPLGRLRDGDWVEVIV 540 TYQLTSALKHL +GK+V+LITDARFSGVSTGACIGHIGPEALAGGP+G+LRDGD +E+IV Sbjct: 512 TYQLTSALKHLSYGKHVSLITDARFSGVSTGACIGHIGPEALAGGPIGKLRDGDMIEIIV 571 Query: 541 DTVKLEGSVNLIGDGEQPGSPEAGVDILAARTAHPLLAVDPGLPDDTRLWAALQAVSGGT 600 D +L GSVN IG + S +L R+ HP L +P LPDDTRLWAALQ+VSGGT Sbjct: 572 DRNELVGSVNFIGTENERLSLADASQVLKERSLHPDLQPNPDLPDDTRLWAALQSVSGGT 631 Query: 601 WQGCVYDTDKIITALEAGRQAL 622 W+G +YDTD+II L+AG +AL Sbjct: 632 WRGNIYDTDRIIEVLKAGVKAL 653 >B9XB68.1 B9XB68_9BACT Dehydratase, YjhG/YagF family EC=4.2.1.9 Length = 665 Score = 842 bits (2175), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/623 (65%), Positives = 494/623 (79%), Gaps = 2/623 (0%) Query: 1 MLRSAPSGEIFGMTQNSGMGWNPLLLNRPQYLILGTMGGIRREDGSPLALGYHTGHWEIG 60 +L + PSG++FG+TQN+GMGWNP L R Q+LIL T GG+R DG P+ALGYHTGHWEIG Sbjct: 35 LLLNRPSGDLFGLTQNAGMGWNPSELGRKQFLILSTQGGLRAPDGQPIALGYHTGHWEIG 94 Query: 61 LMMEEVAQEITEQQGIPFAGYVSDPCXXXXXXXXXXGMFDSLPYRNDAAMVLRRLIRSLP 120 L+++E A+E + IPFA Y SDPC GMFDSLPYRNDAA++ RRL RSLP Sbjct: 95 LLVKEAAEEFRRLKAIPFAAYCSDPCDGRTQGTT--GMFDSLPYRNDAAIIFRRLARSLP 152 Query: 121 TRKGVLGVATCDKGLPAMMVALAGMRDLPGIIVPGGVSLPPVHGEDAGKVQSIGARFSNG 180 R GV+GVATCDKGLPAMM+ALAGMRDLP I+VPGGV+LPP GEDAG +Q+IGARF++G Sbjct: 153 QRAGVMGVATCDKGLPAMMMALAGMRDLPCILVPGGVTLPPETGEDAGTIQTIGARFAHG 212 Query: 181 ELSLEEAADLGCRACATPGGGCQFLGTAATAQVVAEALGLSVPHSALAPSGQPVWKNMGR 240 +SLEEAADLGCRACA+PGGGCQFLGTAAT+QVV EALG+S+PHSALAPSGQPVW +M Sbjct: 213 TISLEEAADLGCRACASPGGGCQFLGTAATSQVVGEALGMSLPHSALAPSGQPVWLDMAT 272 Query: 241 QSARALLHMEHSGMVMKDILTNQAIMNAMVVHAAFGGSTNXXXXXXXXXXXXXXRIPTVQ 300 +SARAL +E M ILT+ +I NAMVVHAAFGGSTN RIPTV+ Sbjct: 273 RSARALCELEAGRKTMAHILTDASIRNAMVVHAAFGGSTNLLLHIPAIAHAAGLRIPTVE 332 Query: 301 DWNAVNRRVPRLVSVLPNGPVPHPTIRVFLAGGVPEVMLYLRRLGLIDDSVRTVTGRTLG 360 DW VNRRVPRLVSVLPNGPV HPT+RVFLAGGVPEVML+LRRLGL++ V TV GRTL Sbjct: 333 DWIEVNRRVPRLVSVLPNGPVHHPTVRVFLAGGVPEVMLHLRRLGLLETKVLTVAGRTLD 392 Query: 361 ENLDWWETSQRRKDMRQRLQEADGIDPDTVIMSPREAKRQGLASTMTFPIGNLAPEGSVI 420 + L+WWE S+RR+ R+ L+ ADG++PD VIMSP AK G+ ST+TFP GNLAPEGSV+ Sbjct: 393 DVLNWWEKSERRQQFREILKGADGVEPDEVIMSPEMAKACGMTSTLTFPRGNLAPEGSVV 452 Query: 421 KSAAIDPSVLDSEGVYRHVGRVKVFTAEKDAIRSIKDGLIRAGDILAVIGRGPSGTGMEE 480 KSAAIDPSV+D++GVYR G ++F EKDA+ +IK I+AGDI+ ++G GP GTGMEE Sbjct: 453 KSAAIDPSVVDADGVYRKEGPARIFVNEKDAMAAIKQNRIQAGDIMVLVGIGPMGTGMEE 512 Query: 481 TYQLTSALKHLPFGKYVTLITDARFSGVSTGACIGHIGPEALAGGPLGRLRDGDWVEVIV 540 TYQ+TSALKHLPFGK+V LITDARFSGVSTGACIGH+GPE LAGGP+G+L +GD + + + Sbjct: 513 TYQVTSALKHLPFGKHVALITDARFSGVSTGACIGHVGPEGLAGGPIGKLCEGDVIRIEI 572 Query: 541 DTVKLEGSVNLIGDGEQPGSPEAGVDILAARTAHPLLAVDPGLPDDTRLWAALQAVSGGT 600 D ++GSVNL+G+G + +PE G +L+ R++ LA +P LPDDTRLWAALQ GGT Sbjct: 573 DRNNMQGSVNLVGEGLKRFTPEEGAIVLSKRSSRKDLAANPALPDDTRLWAALQMAGGGT 632 Query: 601 WQGCVYDTDKIITALEAGRQALG 623 W GCVYD ++I+ L+AG++ALG Sbjct: 633 WAGCVYDVERIVETLQAGQRALG 655 >B6F7T9.1 B6F7T9_9ENTR Putative uncharacterized protein Length = 655 Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/623 (65%), Positives = 485/623 (77%), Gaps = 2/623 (0%) Query: 1 MLRSAPSGEIFGMTQNSGMGWNPLLLNRPQYLILGTMGGIRREDGSPLALGYHTGHWEIG 60 ML +PSG +FGMTQN+GMGW+ L + LI+GT GGIR DG P+ALGYHTGHWEIG Sbjct: 34 MLMESPSGNLFGMTQNAGMGWDANKLTGKEVLIIGTQGGIRAGDGRPVALGYHTGHWEIG 93 Query: 61 LMMEEVAQEITEQQGIPFAGYVSDPCXXXXXXXXXXGMFDSLPYRNDAAMVLRRLIRSLP 120 + M+ A+EIT GIPFA +VSDPC GMFDSLPYRNDAA+V RRLIRSLP Sbjct: 94 MQMQAAAKEITRNGGIPFAAFVSDPCDGRSQGTH--GMFDSLPYRNDAAIVFRRLIRSLP 151 Query: 121 TRKGVLGVATCDKGLPAMMVALAGMRDLPGIIVPGGVSLPPVHGEDAGKVQSIGARFSNG 180 TR+ V+GVATCDKGLPA M+ALA M +LP I+VPGG +LPP GEDAGKVQ+IGARF+N Sbjct: 152 TRRAVIGVATCDKGLPATMIALASMHNLPTILVPGGATLPPTVGEDAGKVQTIGARFANH 211 Query: 181 ELSLEEAADLGCRACATPGGGCQFLGTAATAQVVAEALGLSVPHSALAPSGQPVWKNMGR 240 ELSL+EAA+LGCRACA+PGGGCQFLGTA T+QVVAEALGL++PHSALAPSGQ VW + R Sbjct: 212 ELSLQEAAELGCRACASPGGGCQFLGTAGTSQVVAEALGLALPHSALAPSGQAVWLEIAR 271 Query: 241 QSARALLHMEHSGMVMKDILTNQAIMNAMVVHAAFGGSTNXXXXXXXXXXXXXXRIPTVQ 300 QSARA+ +++ G+ +DILT++AI NAMV+HAAFGGSTN IP V Sbjct: 272 QSARAVSELDNRGITTRDILTDKAIENAMVLHAAFGGSTNLLLHIPAIAHAAGCTIPDVA 331 Query: 301 DWNAVNRRVPRLVSVLPNGPVPHPTIRVFLAGGVPEVMLYLRRLGLIDDSVRTVTGRTLG 360 W +NR VPRLVSVLPNGP HPT+R FLAGGVPEVML+LR LGL+ + TVTG+T+G Sbjct: 332 HWTRINRNVPRLVSVLPNGPDYHPTVRAFLAGGVPEVMLHLRELGLLHEDAMTVTGQTVG 391 Query: 361 ENLDWWETSQRRKDMRQRLQEADGIDPDTVIMSPREAKRQGLASTMTFPIGNLAPEGSVI 420 ENLDWW+ S+RR RQ L+E DG+DPD VI+ P AK +GL ST+ FP GN+APEGSVI Sbjct: 392 ENLDWWQASERRARFRQCLREQDGVDPDDVILPPGRAKARGLTSTVCFPTGNIAPEGSVI 451 Query: 421 KSAAIDPSVLDSEGVYRHVGRVKVFTAEKDAIRSIKDGLIRAGDILAVIGRGPSGTGMEE 480 K+ AIDPSV+D +GVYRH GRV+VF +E AI++IK I+ GDI+ VIG GPSGTGMEE Sbjct: 452 KATAIDPSVVDDDGVYRHTGRVRVFVSEAQAIKAIKREEIQQGDIMVVIGGGPSGTGMEE 511 Query: 481 TYQLTSALKHLPFGKYVTLITDARFSGVSTGACIGHIGPEALAGGPLGRLRDGDWVEVIV 540 TYQLTSALKH+ +GK V+LITDARFSGVSTGAC GH+ PEALAGGP+G+LRD D +E+ V Sbjct: 512 TYQLTSALKHISWGKTVSLITDARFSGVSTGACFGHVSPEALAGGPIGKLRDNDIIEIAV 571 Query: 541 DTVKLEGSVNLIGDGEQPGSPEAGVDILAARTAHPLLAVDPGLPDDTRLWAALQAVSGGT 600 D + L GSVN IG E P +PE G LA R HP L LPDDTRLWAALQ+VSGGT Sbjct: 572 DRLTLTGSVNFIGTAEHPLTPEEGARELAVRQTHPDLHAHDFLPDDTRLWAALQSVSGGT 631 Query: 601 WQGCVYDTDKIITALEAGRQALG 623 W+GC+YDTDKII + AG++ALG Sbjct: 632 WKGCIYDTDKIIEVINAGKKALG 654 >A4W613.1 A4W613_ENT38 Dihydroxy-acid dehydratase EC=4.2.1.9 Length = 655 Score = 833 bits (2153), Expect = 0.0, Method: Compositional matrix adjust. Identities = 403/623 (64%), Positives = 486/623 (78%), Gaps = 2/623 (0%) Query: 1 MLRSAPSGEIFGMTQNSGMGWNPLLLNRPQYLILGTMGGIRREDGSPLALGYHTGHWEIG 60 ML +PSG +FGMTQN+GMGW+ L + LI+G GGIR DG P+ALGYHTGHWEIG Sbjct: 34 MLMESPSGNLFGMTQNAGMGWDANKLTGKEVLIIGAQGGIRAGDGRPVALGYHTGHWEIG 93 Query: 61 LMMEEVAQEITEQQGIPFAGYVSDPCXXXXXXXXXXGMFDSLPYRNDAAMVLRRLIRSLP 120 L M+ A+EIT GIPFA +VSDPC GMFDSLPYRNDAA+V RRLIRSLP Sbjct: 94 LQMQAAAKEITRHGGIPFAAFVSDPCDGRSQGTH--GMFDSLPYRNDAAIVFRRLIRSLP 151 Query: 121 TRKGVLGVATCDKGLPAMMVALAGMRDLPGIIVPGGVSLPPVHGEDAGKVQSIGARFSNG 180 TR+ V+GVATCDKGLPA M+ALA M LP I+VPGG +LPP GEDAGKVQ+IGAR++N Sbjct: 152 TRRAVIGVATCDKGLPATMIALASMHHLPTILVPGGATLPPTFGEDAGKVQTIGARYAND 211 Query: 181 ELSLEEAADLGCRACATPGGGCQFLGTAATAQVVAEALGLSVPHSALAPSGQPVWKNMGR 240 ELSL+EAA+LGCRACA+PGGGCQFLGTA T+QVVAEALGL++PHSALAPSGQ VW + R Sbjct: 212 ELSLQEAAELGCRACASPGGGCQFLGTAGTSQVVAEALGLALPHSALAPSGQDVWLEISR 271 Query: 241 QSARALLHMEHSGMVMKDILTNQAIMNAMVVHAAFGGSTNXXXXXXXXXXXXXXRIPTVQ 300 QSARA++ +++ G+ +DILT++AI NAMV+HAAFGGSTN +P V+ Sbjct: 272 QSARAVIELDNRGITTRDILTDKAIENAMVIHAAFGGSTNLLLHIPAIAHAAGCTLPDVE 331 Query: 301 DWNAVNRRVPRLVSVLPNGPVPHPTIRVFLAGGVPEVMLYLRRLGLIDDSVRTVTGRTLG 360 W +NR+VPRLVSVLPNGP HPT+R FLAGGVPEVML+LR LGL+ + TVTG+T+G Sbjct: 332 HWTRINRKVPRLVSVLPNGPDYHPTVRAFLAGGVPEVMLHLRALGLLHEDAMTVTGQTVG 391 Query: 361 ENLDWWETSQRRKDMRQRLQEADGIDPDTVIMSPREAKRQGLASTMTFPIGNLAPEGSVI 420 ENLDWW+ S+RR RQ L++ DG+DPD VI+ P AK +GL ST+ FP+GN+APEGSVI Sbjct: 392 ENLDWWQASERRARFRQCLRDQDGVDPDDVILPPERAKARGLTSTVAFPVGNIAPEGSVI 451 Query: 421 KSAAIDPSVLDSEGVYRHVGRVKVFTAEKDAIRSIKDGLIRAGDILAVIGRGPSGTGMEE 480 K+ AIDPSV+ +GVYRH GR +VF +E AI++IK+G I GDI+ VIG GPSGTGMEE Sbjct: 452 KATAIDPSVVGEDGVYRHTGRARVFVSEARAIKAIKNGEIEHGDIMVVIGGGPSGTGMEE 511 Query: 481 TYQLTSALKHLPFGKYVTLITDARFSGVSTGACIGHIGPEALAGGPLGRLRDGDWVEVIV 540 TYQLTSALKH+ +GK V+LITDARFSGVSTGAC GH+ PEALAGGP+G+LRD D +E++V Sbjct: 512 TYQLTSALKHVSWGKSVSLITDARFSGVSTGACFGHVAPEALAGGPIGKLRDDDIIEIVV 571 Query: 541 DTVKLEGSVNLIGDGEQPGSPEAGVDILAARTAHPLLAVDPGLPDDTRLWAALQAVSGGT 600 D + L GSVN IG P +P+ G LA R HP L LPDDTRLWAALQ+VSGGT Sbjct: 572 DRLSLTGSVNFIGTRHAPLTPDEGAAELARRQPHPELHAHDFLPDDTRLWAALQSVSGGT 631 Query: 601 WQGCVYDTDKIITALEAGRQALG 623 W+GC+YDTDKII + AG++ALG Sbjct: 632 WKGCIYDTDKIIEVINAGKKALG 654 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,810,930,666 Number of extensions: 169094612 Number of successful extensions: 428121 Number of sequences better than 1.0e-05: 2537 Number of HSP's gapped: 416887 Number of HSP's successfully gapped: 2791 Length of query: 625 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 483 Effective length of database: 1,722,912,073 Effective search space: 832166531259 Effective search space used: 832166531259 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 134 (56.2 bits)