BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0346.0075.p (528 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KF50.1 B3KF50_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 721 0.0 Q9K6P5.1 Q9K6P5_BACHD Xylan beta-1,4-xylosidase EC=3.2.1.37 712 0.0 Q1QYF9.1 Q1QYF9_CHRSD Alpha-L-arabinofuranosidase EC=3.2.1.55 668 0.0 A8VR97.1 A8VR97_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 651 0.0 C1XN14.1 C1XN14_MEIRU Beta-xylosidase 650 0.0 >B3KF50.1 B3KF50_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 Length = 524 Score = 721 bits (1862), Expect = 0.0, Method: Compositional matrix adjust. Identities = 351/524 (66%), Positives = 404/524 (77%), Gaps = 2/524 (0%) Query: 4 SLIQNPILRGFHPDPSICRAGEDYYIATSTFEWFPGVRIHHSRDLVHWRMLTHALTRKSQ 63 ++I NP+LRGFHPDPSICRAGEDYYIATSTFEWFPGVRIHHSRDLVHW+ + L+R SQ Sbjct: 2 NMITNPVLRGFHPDPSICRAGEDYYIATSTFEWFPGVRIHHSRDLVHWKPIQSPLSRTSQ 61 Query: 64 LDMEGDLDSGGVWAPCLSYDNGIFYLIYTDVKSRQGAFKDTPNYLVTARNIEGPWSEPVY 123 L MEG++DSGGVWAPCLSYDNG+FYLIYTDVKSR GAFKDT NYLVTA++IEGPWSEPVY Sbjct: 62 LHMEGNIDSGGVWAPCLSYDNGVFYLIYTDVKSRIGAFKDTHNYLVTAKDIEGPWSEPVY 121 Query: 124 LNSSGFDPSLFHDSDGRKWLVNMRWDHRTDKNSFAGIVLQEYSAELERLIGPVFPIYKGT 183 LNSSGFDPSLFHD DGRKWLVNM WDHR KN F+GIVLQE+S + ++LIGP I+KGT Sbjct: 122 LNSSGFDPSLFHDEDGRKWLVNMIWDHRKGKNRFSGIVLQEFSVQEQKLIGPAVNIFKGT 181 Query: 184 ALGLTEGPHLYRKDGWYYLITAEGGTQYNHAVTVARSRNIEGPYETAPHNPLLTSAGNSE 243 LGLTE PHLY+ +YYLITAEGGT Y HAVTVARSR ++GPYE P NP+LTS G + Sbjct: 182 ELGLTEAPHLYKYKDFYYLITAEGGTGYEHAVTVARSRMLQGPYEVDPANPILTSYGRPD 241 Query: 244 LELQKAGHGCLVHTHTDEWYMVHLCGRPVKEKYCNLGRETAIQRCVFTEEAWLALADGTN 303 L LQKAGHG LV THT EWYM HL GRPV ++C LGRETA+Q+CV++E+ WL LA G Sbjct: 242 LMLQKAGHGSLVETHTGEWYMAHLVGRPVNGQFCTLGRETALQQCVWSEDGWLRLASGDR 301 Query: 304 RPSVTVEGPDIPAHPFPAVAERDDFDAPELDVRWSTLRVPADESWLSLKERQGFLRLRGR 363 P V V P I HPF + D FD P L W+TLR+P D +WLSL ER G LRLRG Sbjct: 302 YPEVQVPAPKIMPHPFEPAPKMDHFDQPMLRSDWNTLRIPPDSTWLSLTERPGCLRLRGM 361 Query: 364 ESMSSLHRQSLVALRQQAFCCSAETELEFEPEHFQQMAGLIVYYDTKDYVYLRITHDEVL 423 ESMSS HRQS+VA R QAF C AET LEF P+H QQMAGLI+YYDTKDY+YLR+T+ E Sbjct: 362 ESMSSTHRQSMVARRLQAFACEAETCLEFAPDHPQQMAGLILYYDTKDYLYLRVTYHEEK 421 Query: 424 GKCLGIVRSVDGVYDDSICAQIPLLPGASCRLKVLIERESAQFYYSV-GSTLWEKIGPSL 482 G CLGI++S G+YD+ + I L P RLKV+I+ + A FYY + W G Sbjct: 422 GLCLGIIQSRYGIYDE-LLDDITLKPVNGIRLKVVIDHDRACFYYGLQDDPSWHPAGGWF 480 Query: 483 DIYHLSDDFPAYIRFTGTFIGMCAQDLSGTFHAADFDYFEYKEL 526 DI HLSD+ P YIRFTGT+IG+C QDL GT ADFDYF YKE+ Sbjct: 481 DITHLSDESPEYIRFTGTYIGLCVQDLGGTRKHADFDYFVYKEM 524 >Q9K6P5.1 Q9K6P5_BACHD Xylan beta-1,4-xylosidase EC=3.2.1.37 Length = 528 Score = 712 bits (1837), Expect = 0.0, Method: Compositional matrix adjust. Identities = 333/524 (63%), Positives = 403/524 (76%), Gaps = 1/524 (0%) Query: 6 IQNPILRGFHPDPSICRAGEDYYIATSTFEWFPGVRIHHSRDLVHWRMLTHALTRKSQLD 65 IQNPIL GFHPDPSI R G+DYYIATSTFEWFPGVRIHHSRDL HWR ++ LTR SQLD Sbjct: 5 IQNPILPGFHPDPSIVRVGDDYYIATSTFEWFPGVRIHHSRDLKHWRFVSSPLTRTSQLD 64 Query: 66 MEGDLDSGGVWAPCLSYDNGIFYLIYTDVKSRQGAFKDTPNYLVTARNIEGPWSEPVYLN 125 M+G+++SGG+WAPCLSY +G FYLIYTDVK GAFKD NYLVTA+NIEGPWS+P+YLN Sbjct: 65 MKGNMNSGGIWAPCLSYHDGTFYLIYTDVKQWHGAFKDAHNYLVTAQNIEGPWSDPIYLN 124 Query: 126 SSGFDPSLFHDSDGRKWLVNMRWDHRTDKNSFAGIVLQEYSAELERLIGPVFPIYKGTAL 185 SSGFDPSLFHD DGRKWLVNM WD+R + FAGI+LQEYS ++L+GPV IYKGT + Sbjct: 125 SSGFDPSLFHDDDGRKWLVNMIWDYRKGNHPFAGIILQEYSEAEQKLVGPVKNIYKGTDI 184 Query: 186 GLTEGPHLYRKDGWYYLITAEGGTQYNHAVTVARSRNIEGPYETAPHNPLLTSAGNSELE 245 LTEGPHLY+KDG+YYL+ AEGGT+Y HA T+ARS++I+GPYET P PL+TS G EL Sbjct: 185 QLTEGPHLYKKDGYYYLLVAEGGTEYEHAATLARSQSIDGPYETDPSYPLVTSTGQPELA 244 Query: 246 LQKAGHGCLVHTHTDEWYMVHLCGRPVKEKYCNLGRETAIQRCVFTEEAWLALADGTNRP 305 LQKAGHG LV T EWY+ HLCGRP+K KYC LGRETAIQ+ +TE+ WL + DG N P Sbjct: 245 LQKAGHGSLVETQNGEWYLAHLCGRPLKGKYCTLGRETAIQKVNWTEDGWLRIEDGGNHP 304 Query: 306 SVTVEGPDIPAHPFPAVAERDDFDAPELDVRWSTLRVPADESWLSLKERQGFLRLRGRES 365 V PD+P HPF E DDFDAP+L +W+TLR+PAD SW SL+ER G LRLRG ES Sbjct: 305 LREVTAPDLPEHPFEKEPELDDFDAPQLHHQWNTLRIPADPSWCSLEERPGHLRLRGMES 364 Query: 366 MSSLHRQSLVALRQQAFCCSAETELEFEPEHFQQMAGLIVYYDTKDYVYLRITHDEVLGK 425 ++S+H QSLVA RQQ+F C ET+LE++PE FQ MAGL++YYDT+D+VYL +T E GK Sbjct: 365 LTSVHSQSLVARRQQSFHCEVETKLEYQPESFQHMAGLVIYYDTEDHVYLHVTWHEEKGK 424 Query: 426 CLGIVRSVDGVYDDSICAQIPLLPGASCRLKVLIERESAQFYYSV-GSTLWEKIGPSLDI 484 CL I+++ G YD+ + + IPL + LK I RE+ Y+ G W+ +GP++D+ Sbjct: 425 CLQIIQTKGGNYDELLASPIPLAEEKAVYLKGRIHRETMHLYFKQEGEAEWQPVGPTIDV 484 Query: 485 YHLSDDFPAYIRFTGTFIGMCAQDLSGTFHAADFDYFEYKELSR 528 H+SDD +RFTGTF+GM QDLSGT ADFDYF YKEL + Sbjct: 485 THMSDDSAKQVRFTGTFVGMATQDLSGTKKPADFDYFRYKELDQ 528 >Q1QYF9.1 Q1QYF9_CHRSD Alpha-L-arabinofuranosidase EC=3.2.1.55 Length = 523 Score = 668 bits (1724), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/523 (61%), Positives = 386/523 (73%), Gaps = 2/523 (0%) Query: 4 SLIQNPILRGFHPDPSICRAGEDYYIATSTFEWFPGVRIHHSRDLVHWRMLTHALTRKSQ 63 ++I NP+L G+HPDPS+ R +DYYIA STFEWFPGV+IHHSRDLVHWR+LT+ LTR +Q Sbjct: 2 AIITNPVLPGYHPDPSMLRVDDDYYIAVSTFEWFPGVQIHHSRDLVHWRLLTYPLTRTTQ 61 Query: 64 LDMEGDLDSGGVWAPCLSYDNGIFYLIYTDVKSRQGAFKDTPNYLVTARNIEGPWSEPVY 123 LDM G++DSGGVWAPCLS+ +G+FYLIYTDVKSR+GAFKDT NYLVTA NIEGPWS+PVY Sbjct: 62 LDMVGNIDSGGVWAPCLSHADGVFYLIYTDVKSRKGAFKDTHNYLVTAENIEGPWSDPVY 121 Query: 124 LNSSGFDPSLFHDSDGRKWLVNMRWDHRTDKNSFAGIVLQEYSAELERLIGPVFPIYKGT 183 LNSSGFDPSLFHD DG WL+NM WD R +N+FAGI LQ Y + L GPV I+KGT Sbjct: 122 LNSSGFDPSLFHDDDGSSWLLNMIWDFRQGENAFAGIALQRYDRISQSLTGPVHNIFKGT 181 Query: 184 ALGLTEGPHLYRKDGWYYLITAEGGTQYNHAVTVARSRNIEGPYETAPHNPLLTSAGNSE 243 LG+TE PHLY+++G+YYLITAEGGT Y HAVTVARS ++ GPYE P NP+LTS Sbjct: 182 RLGVTEAPHLYKRNGYYYLITAEGGTGYTHAVTVARSASLLGPYEVDPDNPVLTSDPGQA 241 Query: 244 LELQKAGHGCLVHTHTDEWYMVHLCGRPVKEKYCNLGRETAIQRCVFTEEAWLALADGTN 303 +LQKAGH LV T EWYM HLC RPV E C LGRETAIQ+C +T++ WL + DG + Sbjct: 242 GQLQKAGHASLVETQNGEWYMAHLCARPVVEDKCILGRETAIQKCHWTQDGWLRVMDGPH 301 Query: 304 RPSVTVEGPDIPAHPFPAVAERDDFDAPELDVRWSTLRVPADESWLSLKERQGFLRLRGR 363 PS+ VE P +P HP P +RD+F +PEL W++LR P E W+SL ER GFLRL+G Sbjct: 302 -PSINVEAPKLPPHPMPMENDRDEFSSPELKGYWNSLRRPFGEDWISLSERPGFLRLKGG 360 Query: 364 ESMSSLHRQSLVALRQQAFCCSAETELEFEPEHFQQMAGLIVYYDTKDYVYLRITHDEVL 423 ESM S+HRQSL+A R F ET+LE+ PE+FQQMAGLI+YYDT DY YL +TH E Sbjct: 361 ESMQSMHRQSLLARRLTDFHVEIETQLEYSPENFQQMAGLIIYYDTTDYAYLCVTHHEAR 420 Query: 424 GKCLGIVRSVDGVYDDSICAQIPLLPGASCRLKVLIERESAQFYYSVGSTLWEKIGPSLD 483 G+CLGI+ S G YD+ + ++ LP RL I E QF+ + W IG +D Sbjct: 421 GRCLGIIESRHGQYDELLTERV-ALPEGPIRLMATIHNERLQFHVASVDEAWRTIGDVID 479 Query: 484 IYHLSDDFPAYIRFTGTFIGMCAQDLSGTFHAADFDYFEYKEL 526 I HLSDD YIRFTGTF+G+CAQDL G AADF YF+Y+ L Sbjct: 480 IRHLSDDAADYIRFTGTFVGLCAQDLGGRRRAADFSYFDYRPL 522 >A8VR97.1 A8VR97_9BACI Alpha-N-arabinofuranosidase EC=3.2.1.55 Length = 526 Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust. Identities = 311/524 (59%), Positives = 387/524 (73%), Gaps = 2/524 (0%) Query: 4 SLIQNPILRGFHPDPSICRAGEDYYIATSTFEWFPGVRIHHSRDLVHWRMLTHALTRKSQ 63 ++I NPIL GFH DPSICR G+D+YIATSTF+WFPGVRIHHSRDL HWR + L R S Sbjct: 2 TMITNPILPGFHADPSICRVGDDFYIATSTFDWFPGVRIHHSRDLKHWRHIASPLDRVSL 61 Query: 64 LDMEGDLDSGGVWAPCLSYDNGIFYLIYTDVKSRQGAFKDTPNYLVTARNIEGPWSEPVY 123 LD++G+++SGGVWAPCLSY +G+FYLIYTDVK GAFKDT NYLVTA +IEGPWSEP+Y Sbjct: 62 LDLKGNMNSGGVWAPCLSYSDGLFYLIYTDVKQWHGAFKDTHNYLVTAPSIEGPWSEPIY 121 Query: 124 LNSSGFDPSLFHDSDGRKWLVNMRWDHRTDKNSFAGIVLQEYSAELERLIGPVFPIYKGT 183 LNS+GFDPSLFHD DGRKWLVNM WD R D++ FAGIVLQEYS ++L GPV IY+GT Sbjct: 122 LNSNGFDPSLFHDDDGRKWLVNMLWDFRKDRHPFAGIVLQEYSPLEQKLTGPVKMIYEGT 181 Query: 184 ALGLTEGPHLYRKDGWYYLITAEGGTQYNHAVTVARSRNIEGPYETAPHNPLLTSAGNSE 243 + LTEGPHLY+++G+YYL AEGGTQY HA TVARS+ I+GPYET PH P +T+ Sbjct: 182 EIKLTEGPHLYKRNGYYYLFVAEGGTQYEHAETVARSKAIDGPYETDPHYPFITAWKKPH 241 Query: 244 LELQKAGHGCLVHTHTDEWYMVHLCGRPVKEKYCNLGRETAIQRCVFTEEAWLALADGTN 303 L +QK+GHG LV T EWY VHL GRPV KYC LGRET IQ+ V+T++ W+ LADG+ Sbjct: 242 LPIQKSGHGSLVDTPEGEWYFVHLGGRPVNGKYCTLGRETFIQKAVWTDDDWIRLADGSQ 301 Query: 304 RPSVTVEGPDIPAHPFPAVAERDDFDAPEL-DVRWSTLRVPADESWLSLKERQGFLRLRG 362 PS+ VEGP +P HPF A DDFD L W++LR+P W+SL ER G LRL+G Sbjct: 302 SPSLEVEGPTLPDHPFEAEPVIDDFDDDSLFPGWWNSLRIPMTPDWVSLTERPGHLRLKG 361 Query: 363 RESMSSLHRQSLVALRQQAFCCSAETELEFEPEHFQQMAGLIVYYDTKDYVYLRITHDEV 422 ESM+SLH Q+L+A RQ F C+ ET L+++PEHFQ M G+ V+YDT D++YL IT V Sbjct: 362 MESMTSLHSQALIARRQTDFQCTIETALDYQPEHFQHMGGMTVFYDTTDFLYLHITAHPV 421 Query: 423 LGKCLGIVRSVDGVYDDSICAQIPLLPGASCRLKVLIERESAQFYYSVGSTL-WEKIGPS 481 G+ L I++ DG YD+ + + + P + +LK +I+ + QFYY T W IGP+ Sbjct: 422 KGRVLQIMQMTDGEYDEVLLSPQTITPSGTVKLKGIIDIDHVQFYYMDQDTPDWVAIGPA 481 Query: 482 LDIYHLSDDFPAYIRFTGTFIGMCAQDLSGTFHAADFDYFEYKE 525 LD+ H+SDD +RFTGTF+GM QDLSGT DFDYF+Y++ Sbjct: 482 LDVTHMSDDSAPDVRFTGTFVGMATQDLSGTRKPCDFDYFKYEK 525 >C1XN14.1 C1XN14_MEIRU Beta-xylosidase Length = 532 Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/528 (60%), Positives = 389/528 (73%), Gaps = 7/528 (1%) Query: 6 IQNPILRGFHPDPSICRAGEDYYIATSTFEWFPGVRIHHSRDLVHWRMLTHALTRKSQLD 65 I NPILRGFHPDPSI R G+DY+IATSTFEW+PGVR+HHSRDLVHWR + +ALTR SQL+ Sbjct: 4 ILNPILRGFHPDPSILRVGDDYFIATSTFEWWPGVRLHHSRDLVHWRPIGYALTRTSQLE 63 Query: 66 MEGDLDSGGVWAPCLSYDNGIFYLIYTDVKSRQGA--FKDTPNYLVTARNIEGPWSEPVY 123 M G+ DSGG+WAPCLS+D FYLIYTDVK+ FKD NYLVTA +IEGPWSEPVY Sbjct: 64 MLGNPDSGGIWAPCLSHDGAQFYLIYTDVKTWGNGEVFKDAHNYLVTAPSIEGPWSEPVY 123 Query: 124 LNSSGFDPSLFHDSDGRKWLVNMRWDHRTDKNSFAGIVLQEYSAELERLIGPVFPIYKGT 183 LNSSGFDPSLFHD DGRKWL+NMRWDHR +N+FAGI+LQEY + +RL+GPV I++GT Sbjct: 124 LNSSGFDPSLFHDEDGRKWLLNMRWDHRKGRNAFAGILLQEYDPQQKRLVGPVHNIFRGT 183 Query: 184 ALGLTEGPHLYRKDGWYYLITAEGGTQYNHAVTVARSRNIEGPYETAPHNPLLTSAGNSE 243 LG+TEGPHLY+KDGWYYL+ AEGGT Y HAVTVARS+ IEGPYE P P LT+ G+ E Sbjct: 184 PLGVTEGPHLYKKDGWYYLVVAEGGTTYAHAVTVARSQRIEGPYEVDPCYPTLTARGHPE 243 Query: 244 LELQKAGHGCLVHTHTDEWYMVHLCGRPVK-----EKYCNLGRETAIQRCVFTEEAWLAL 298 L LQKAGH LV T EWYM HL GRP++ ++C LGRETA+Q+ ++ + W L Sbjct: 244 LPLQKAGHASLVQTQQGEWYMAHLVGRPLEPPQALRRHCPLGRETALQKIRWSPDGWPRL 303 Query: 299 ADGTNRPSVTVEGPDIPAHPFPAVAERDDFDAPELDVRWSTLRVPADESWLSLKERQGFL 358 G+N P++ VE P +PAHP+P ERDDF+AP L + + TLR P D SWLSL ER +L Sbjct: 304 WHGSNTPALEVEAPALPAHPWPKEPERDDFEAPTLSLHFQTLRHPPDPSWLSLTERPSYL 363 Query: 359 RLRGRESMSSLHRQSLVALRQQAFCCSAETELEFEPEHFQQMAGLIVYYDTKDYVYLRIT 418 RL GRES+SS HRQSLVA R Q F AET LEFEP+HFQQMAGL+ YYDT ++VYLR++ Sbjct: 364 RLFGRESLSSRHRQSLVARRLQHFYAEAETVLEFEPQHFQQMAGLVCYYDTGNWVYLRVS 423 Query: 419 HDEVLGKCLGIVRSVDGVYDDSICAQIPLLPGASCRLKVLIERESAQFYYSVGSTLWEKI 478 DE LGK L I+ +G YD+ + ++ + + LKV +R++ F YS W +I Sbjct: 424 RDEALGKTLSILTCDNGHYDEPLDGELGIEGWSRVYLKVRYQRDTFGFAYSANGLDWSEI 483 Query: 479 GPSLDIYHLSDDFPAYIRFTGTFIGMCAQDLSGTFHAADFDYFEYKEL 526 Y LSDD + FTGTFIG+CAQDLSG ADFDYF Y+ L Sbjct: 484 PLRFPAYKLSDDHCRGLGFTGTFIGLCAQDLSGARLHADFDYFVYRGL 531 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.440 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,489,547,092 Number of extensions: 154920125 Number of successful extensions: 274898 Number of sequences better than 1.0e-05: 600 Number of HSP's gapped: 272600 Number of HSP's successfully gapped: 610 Length of query: 528 Length of database: 3,060,696,203 Length adjustment: 141 Effective length of query: 387 Effective length of database: 1,732,333,088 Effective search space: 670412905056 Effective search space used: 670412905056 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 134 (56.2 bits)