BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0346.0050.p (1015 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A7VXP7.1 A7VXP7_9CLOT Putative uncharacterized protein 662 0.0 B1D6L2.1 B1D6L2_9BACL Ig domain protein 505 e-140 Q9AMT5.1 Q9AMT5_BRAJA ID880 242 1e-61 A6DJ07.1 A6DJ07_9BACT Putative uncharacterized protein 189 9e-46 Q5L7V1.1 Q5L7V1_BACFN Putative uncharacterized protein 153 1e-34 >A7VXP7.1 A7VXP7_9CLOT Putative uncharacterized protein Length = 2222 Score = 662 bits (1708), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/899 (42%), Positives = 512/899 (56%), Gaps = 80/899 (8%) Query: 12 GAYELTSDKLLIETGQYGEISSLKIKGDAFPTEYVMNKTVSPEQDTADHQWLGELLFTYR 71 G Y + + +E G G+I +L + GD + T YV++ +Q H +GEL+ + + Sbjct: 481 GGYYMANQYFEVEIGTRGQIRALYLVGDEYRTNYVIDT----DQAGIGHG-VGELILSVK 535 Query: 72 LDGGE-WIKASTNQSGDVRIIDKDGSKVTVTYENSANAGGIHHFKLVETYTMEADGSLQW 130 +G E + + T SGD R + K+ VTYEN+ I+ FK+VETY D L+W Sbjct: 536 KEGEETYQEYFTTVSGDGRSFSIEDDKLVVTYENATGNKAINGFKVVETYQY-VDDQLRW 594 Query: 131 DIHVANISGKSLEFGDIGLPLPFNEQWT-YGDAIYETRVVTHSFVGGSGSYITAGRPSGI 189 V N + GD G+P+ FNE + + IY+ RVV HSFVG SY+ A RPSG Sbjct: 595 SATVENTGETDIVVGDWGIPIQFNENLSGTAEEIYQRRVVDHSFVGMDSSYLYATRPSGE 654 Query: 190 GSYLMLMPDAVTGAGFEYQDRWRNEEHPGSKWAWNPDNEGKWIEGLNVFYIHSNVIKSTN 249 G YL+ P+A T A EY D W ++E NE ++ GL V+YIHS+ IK T+ Sbjct: 655 GRYLLFTPEASTDAKLEYMDHWADQERA---------NEESYVGGLFVYYIHSDNIKKTH 705 Query: 250 RGYL-PHTSLILAAGESKTYGFKLFAVANEQEAKDRLYQEGLIDVTVVPGMIVPINQKAK 308 RGYL +TS+ + GESKTY F AV +E++ + LY+E L+D+ VPG ++ K Sbjct: 706 RGYLDTNTSVTIPVGESKTYAFNFTAVMDEEDMRSTLYEEDLVDMVAVPGFAYSVDMPRK 765 Query: 309 FDLRTKA-----------------------DIHSV----KLDDGTDVPLLEQKSGD---H 338 L TK +++SV K D+ T LE K+ D + Sbjct: 766 IYLHTKVPQEKIRIDIQCPHESGVYEDMGDNVYSVMEHTKTDENTYAKYLETKTVDGEQY 825 Query: 339 HIYEFSLGKLGPQHVTVHY---GSGLTTVLQFYGIDAVDRALEDHATFMVEQTQWNLPGD 395 HIYE + G ++ V+Y G V QFY +D VD L DHA FMVE+TQ + PG Sbjct: 826 HIYELKFTEFGHHNLIVNYEQAGGTKQAVSQFYMMDTVDNMLNDHAEFMVEKTQLDRPGK 885 Query: 396 IRDKVFDDWMMNTKSKRNNFSG----------YWGWGDDWGLTHGQFLAEKNALSPVASE 445 + DKVFD++ +N K R G YWGWGDDWG TH QFLAE NA+SP + Sbjct: 886 VGDKVFDEYWLNIKGNRIETFGEDGDGYFQMNYWGWGDDWGATHAQFLAEMNAISPNKDQ 945 Query: 446 ITAVDEYLETAIWTNLMNGHHEDYLIHDFLMEEPNTTPTYRGYAYPHIYNTYFSMYKIAS 505 + A+D YL+ AIW LM H +DY +H+FLME PNT+P RGYAYPHIYNTYFSMYKIA Sbjct: 946 VEALDAYLDVAIWNELMREHQKDYRVHNFLMEAPNTSPDGRGYAYPHIYNTYFSMYKIAE 1005 Query: 506 NYPELVAYKHPKETYLLRAYNILKALYEGPVSYNWETGLMGELTTPDIIQALEDEGYVDE 565 NYPELV Y+ ETYLLRAYNI G V Y G MGE + PDII+ALE EGY +E Sbjct: 1006 NYPELVDYREDAETYLLRAYNIFCTQNNGSVGYGANCGTMGESSVPDIIEALEQEGYYEE 1065 Query: 566 A-NDVRAKMLRXXXXXXXXXXXXGSEYSYDNTGEEAVYTLAKMQKDNSSEQAKAL---EM 621 A N +R GSEY+YDNT EE V+ A + ++ E + E Sbjct: 1066 AQNMLRIMEENKYEAFENRPYPYGSEYAYDNTAEEGVFVAAMLAQEYGFESDPYMSPEER 1125 Query: 622 MGKINAKTRASRGQMPVWYYYADPVTITGENWWNFQYSVSLAGYAMDDWIRYHAAANREE 681 + ++ KTRA RG P+WYYYA+PVTI ENWWNFQYS++LA MD+W+R +E Sbjct: 1126 IKALDDKTRACRGVQPLWYYYANPVTICNENWWNFQYSMALAAVPMDNWLRLQDNGMTQE 1185 Query: 682 E----QRLSYAAKLANLSAINSGQISDDPANYGAAAWTYQAEKXXXXXXXXXXXRNVPLL 737 E +R++YA+KL NL+ +NSGQI DP G AW+YQ+E Sbjct: 1186 EKGVAERVNYASKLGNLTCVNSGQICADPETIGTVAWSYQSEMGDYAAVGDIR------Y 1239 Query: 738 NGWKGMTGEADLGLFGALQILSADIAVDPIFGVTGYGADVTVTDSVYYNITPTDGLFKRI 797 NGW+ GE+ LGL+GAL+ILSAD+A DPIFG+ GYG +V S Y +TP DG+ +R+ Sbjct: 1240 NGWRHRAGESGLGLWGALRILSADVATDPIFGLFGYGCEVNDNGSA-YEVTPLDGVQQRL 1298 Query: 798 NLITEKLYAELDKDQFTEVRLSANKDYAKFSLRNLTPGYA--HETTLTLNGLVKGAYLI 854 +LI E++Y EL++DQ+T + NKD F+L + G H+ L + GL G+Y I Sbjct: 1299 HLIDEEIYIELNRDQYT--KAVVNKDGTGFTLTVDSNGTGDKHDLELEVYGLAAGSYQI 1355 >B1D6L2.1 B1D6L2_9BACL Ig domain protein Length = 2215 Score = 505 bits (1300), Expect = e-140, Method: Compositional matrix adjust. Identities = 361/1109 (32%), Positives = 519/1109 (46%), Gaps = 142/1109 (12%) Query: 2 LSVILLPSKAGAYELTSD-KLLIETGQYGEISSLKIKGDAF-----PTEYVMNKTVSPEQ 55 L + +PS A A S+ L + G G+I L I+ + P +V+ SP+ Sbjct: 24 LGINAVPSAAAATNSISNASLSAKVGDLGQIEELYIQNNPTNKSGKPINFVLPNNTSPQN 83 Query: 56 DTADHQWLGELLFTYRL--------DGGEWIKASTNQS----GDVRIID----------- 92 D HQW+GE+LF+YR D +++ TN++ G + + Sbjct: 84 DV-QHQWMGEMLFSYRTGDSKQFPSDRTGFVEVDTNKTLAAGGSTKYTNINPANPYFTKE 142 Query: 93 --KDGSKVTVTYE----NSANAGGIHHFKLVETYTMEAD-GSLQWDIHVANISGKSLEFG 145 DG KV V + +S A + F + + M+ D GS+ W+I V N SGK +EFG Sbjct: 143 ASTDGKKVEVNFIGQNIDSTTARAMKGFDVKSVFDMDTDDGSMLWEITVKNKSGKYIEFG 202 Query: 146 DIGLPLPFNEQWTYGDAIYETRVVTHSFVGGSGSYITAGRPSGIGSYLMLMPDAVTGAGF 205 DIGLP+P+N ++ Y+ RV H+F G Y A R SG G+++M P +GA Sbjct: 203 DIGLPMPWNNKYQSVSDTYDNRVTVHNFAGADSGYSYAIRTSGEGNFMMFAPVPDSGARI 262 Query: 206 EYQDRW---RNEEHPGSKWAWNPDNEGKWIEGLNVFYIHSNVIKSTNRGYLPH-TSLILA 261 EY D W E GS ++ + G W GLNV YIHS I+ T RGY TSL+L Sbjct: 263 EYVDYWLGDTGELRNGSLYSNWVGDSGGWFPGLNVLYIHSKDIQKTGRGYFTDATSLVLG 322 Query: 262 AGESKTYGFKLFAV--------ANEQEA-------KDR-------LYQEGLIDVTVVPGM 299 E KTY FK AV AN Q +DR LY+ G+ID +PG Sbjct: 323 PDEQKTYKFKFSAVRAGDNSPQANAQSPNNASTSMEDREANLRSTLYKSGMIDAVALPGF 382 Query: 300 IVPINQKAKFDLR--------TKADIHSVKLDDGTD---VPLLE-----------QKSG- 336 IN K DL DI SV +D D +P ++ ++G Sbjct: 383 QAAINMPVKLDLHYDDSLIDVQSIDIQSVDENDPFDAAHIPTIKAGQTRSAMVNNTRAGR 442 Query: 337 ------------------------DHHIYEFSLGKLGPQHVTVHYG--SGLT-----TVL 365 HHIY G +G V V+Y SG T Sbjct: 443 GLPDGNPGYSESVQYVETKIINGEQHHIYSLKFGNIGNNSVRVNYKLKSGAEQLDKFTQF 502 Query: 366 QFYGIDAVDRALEDHATFMVEQTQWNLPGDIRDKVFDDWMMNTKSKRNNFSGYWGWGDDW 425 +F + +D+ + H+ FMV++TQ P ++ DW + T WGDDW Sbjct: 503 EFNILAELDQTSQAHSEFMVDKTQDKDPNSPTYGIYRDWYLTTGLDTTTSH----WGDDW 558 Query: 426 GLTHGQFLAEKNALSPVASEITAVDEYLETAIWTNLMNGHHEDYLIHDFLMEEPNTT--- 482 + F+ KN L P +EI +++ YL +W M + + ++L + T Sbjct: 559 SHDNINFMTMKNYLDPDPNEIKSIENYLIDFMWEKYMKDTQNSFTVANYLKDSGAYTNSE 618 Query: 483 -PTYRGYAYPHIYNTYFSMYKIASNYPELVAYKHPKETYLLRAYNILKALYEGPVSYNWE 541 P R ++ YF+MY+I YP L+ Y+ + YL +AY I Y VS + Sbjct: 619 KPYVRTFSEMMESTGYFNMYRIQKAYPNLLDYRETPQYYLEKAYGI----YYNRVS-SGA 673 Query: 542 TGLMGELTTPDIIQALEDEGYVDEANDVRAKMLRXXXXXXXXXXXX-GSEYSYDNTGEEA 600 TG GE PD+I+AL++EG + E +++ K + GSE+ YDNTGEE Sbjct: 674 TGFYGEQQIPDMIEALKEEGMLTEYENLKKKFAQTKGRNVTNAAYPYGSEFEYDNTGEEG 733 Query: 601 VYTLAKMQKDNSSEQAKA---LEMMGKINAKTRASRGQMPVWYYYADPVTITGENWWNFQ 657 Y+ AK + E A+A L+ MG + KTRA RG P WYYY+ PV GE WWNFQ Sbjct: 734 AYSAAKALRTYYPEDARADAALKSMGMADLKTRAMRGIQPTWYYYSVPVFRAGEGWWNFQ 793 Query: 658 YSVSLAGYAMDDWIRYHAAANREEE----QRLSYAAKLANLSAINSGQISDDPANYGAAA 713 Y+ SLAG MDDW+RY E+ Q+ +YAAK++N +A+N GQIS + G + Sbjct: 794 YTASLAGSIMDDWLRYENDGRSGEQAAIAQQRNYAAKISNFNAVNMGQIS--AQSVGGIS 851 Query: 714 WTYQAEKXXXXXXXXXXXRNVPLLNGWKGMTGEADLGLFGALQILSADIAVDPIFGVTGY 773 W Y A+K + NGW+ +GE++ GL+G+L +S+DI DPIFG+ GY Sbjct: 852 WRYNAQKGGTGTKNVNDGGTRVMNNGWQDFSGESEEGLYGSLLRISSDIVTDPIFGLFGY 911 Query: 774 GADVTVTDSVYYNITPTDGLFKRINLITEKLYAELDKDQFTEVRLSANKDYAKFSLRNLT 833 GA VT D Y ITP DG KRINLI EK+Y + D+ ++ + L NL Sbjct: 912 GASVTDEDGTYL-ITPKDGFGKRINLIDEKIYLVSESDRIESAQIQKDGKAFSLQLSNLA 970 Query: 834 PG-YAHETTLTLNGLVKGAYLITIDGEPAGKLNAFGDEAKLTIEAGPAVAYTVELSATEP 892 +A + GL G Y + +DG+ AG+ A ++ + A + + + Sbjct: 971 KSEHASKIDFDGAGLENGYYTMKLDGKDAGQFYALNNKGTAMFQMSGAQTAELTIEKADT 1030 Query: 893 DENQAPAVDAGADFTYTLQVDDAMLRGKAKDDGLPQGTLNPEWTLVSGPEDGEAVFGNSA 952 EN+AP V A + ++ G DDG P GTL +W +VS PE G+ NS Sbjct: 1031 GENEAPQVTAELATKDPQAMIPFVMNGMVTDDGAPNGTLTYQWEVVSTPEGGKLTLTNSK 1090 Query: 953 ALLTSFTATKPGTYVFKLAVSDSELEGSD 981 + T TK G+Y +L +D ++ GS+ Sbjct: 1091 STTTRANGTKEGSYTVRLTANDGQMSGSN 1119 >Q9AMT5.1 Q9AMT5_BRAJA ID880 Length = 936 Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 218/822 (26%), Positives = 353/822 (42%), Gaps = 95/822 (11%) Query: 31 ISSLKIKGDAFPTEYVMNKTVSPEQDTADHQWLGELLFTYRLDGGEWIKASTNQSGDVRI 90 I+SL+ + DA+ T+YV+ V LG R G EW T Sbjct: 92 ITSLRYRNDAYDTDYVLPGAV-----------LGTAHARVRRAGSEWHTLRTG------- 133 Query: 91 IDKDGSKVTVTYENSANAGGIHHFKLVETYTMEADGSLQWDIHVANISGKSLEFGDIGLP 150 +D + E +A G+ L+ T + L W+I + N S+E GD+ P Sbjct: 134 VDATKPMHSAALELAARDAGV----LLTTRLAVDEAGLTWEIMLRNDGMASVEVGDLYFP 189 Query: 151 LPFNEQWTYGDAIYETRVVTHSFVGGSGSYITAGRPSGIGSYLMLMPDAVTGAGFEYQDR 210 +P N ++ G V+ HSFV G GS+I R + G +LML+P+A T EY D Sbjct: 190 MPMNTEFPAGQPA-SVAVLKHSFVSGHGSHIFWIRGNSTGPFLMLLPEADTS--LEYWDV 246 Query: 211 WRNEEHPGSKWAWNPDNEGKWIEGLNVFYIHSNVIKSTNRGYLPHTSLILAAGESKTYGF 270 ++ + + G W + + + R P SL L+ E + Y Sbjct: 247 HKD----------SAEASGTWCAYILGGAAAGEAVAAGTRWRQPTHSLSLSPAEQRRYRL 296 Query: 271 KLFAVANEQEAKDRLYQEGLIDVTVVPGMIVPINQKAKFDLRTKADIHSVKLDDGTD--V 328 + VAN + A+ + GL+DV V+PGM VP + L + + ++ + D V Sbjct: 297 RFQWVANYESARRAIADAGLVDVEVMPGMTVPNDLHVDIALASSIPVERIEAEFTGDTVV 356 Query: 329 PLLEQKSGDHHIYEFSLGKLGPQHVTVHYGSGLTTVLQFYGIDAVDRALEDHATFMVEQT 388 L ++G ++ +LG +T+H T L+F + V+ ++ ATF+V++ Sbjct: 357 QRLPDRAG-RRLWRVRFSRLGENRLTLHQPGARQTFLEFSATEPVETMMKKRATFIVKR- 414 Query: 389 QWNLPGDIRDKVFDDWMMNTKS--KRNNFSGYWGW------GDDWGLTHGQFLAEKNALS 440 Q P D +F +W M T+ +N+ GW DD GL+ +LA KNA Sbjct: 415 QHRDPSKWYDGLFGEWNMETQVLLGPDNYDRIKGWRIYEVTCDDPGLSKPAYLATKNAEH 474 Query: 441 PVASEITAVDEYLETAIWTNLMNGHHEDYL-----IHDFLMEEPNTTP-------TYRGY 488 P +E+ A+D Y++T +W L E Y I D+ ++ P +R Y Sbjct: 475 PDVAEVAALDRYIDTFVWGGLQRTTQEAYAYGLYGIPDWKQNRESSDPGPKGRLHIWRPY 534 Query: 489 AYPHIYNTYFSMYKIASNYPELVAYKHPKETYLLRAYNILKALYEGPVSY----NWETGL 544 YPHI+ Y +M++IA ++P + + ++ YL+RAY A++ P+ + TG Sbjct: 535 DYPHIFAMYLAMHRIARDHPAIPTRQSARD-YLVRAYGTALAMFTVPMRVVMWSAYRTGF 593 Query: 545 MGELTTPDIIQALEDEGYVDEANDVRAKMLRXXXXXX-XXXXXXGSEYSYDNTGEEAVYT 603 E P+++ AL G EA + A R SEY +D+T E+ Sbjct: 594 YNECVIPELVSALTTAGLTREAATLEAHWARKVRAFVDPKADLFKSEYPFDSTAFESTQA 653 Query: 604 LAKMQKDNS----SEQAKALEMMGKINAKTRASRGQM-PVWYYYADPVTITGENWWNFQY 658 LA+ D+ +A A + A RG + P +YY T + + Y Sbjct: 654 LARSALDDPVAMGVSKAAARAFSERQIAANLFCRGWLEPAYYYLGSDYRHTAGDAYTLTY 713 Query: 659 SVSLAGYAMDDWIRYHAAANREEEQ---RLSYAAKLANLSAINSGQISDDPANYGAAAWT 715 + G+A+ D HA + ++ RL YA++L+ + +NSG PA+ G W Sbjct: 714 MAQMGGWALLD----HALNDADDPHPLLRLGYASQLSAWALLNSG-----PASAGHGYW- 763 Query: 716 YQAEKXXXXXXXXXXXRNVPLLNGWKGM---------TGEADLGLFGALQILSADIAVDP 766 Y E+ P W G + E DLG GA++ + +A DP Sbjct: 764 YPGEENDGAAGGGFE--PAPSGTTWLGQPHHRGTWYYSCEIDLGFCGAVRAAATIVADDP 821 Query: 767 IFGVTGYGADVTVTDSVYYNITPTDGLFKRINLITEKLYAEL 808 IFG +G + T + I P DG+ +R+N+ + L +L Sbjct: 822 IFGQVCHGG-IMETFAHTLRIWPRDGVRRRLNVRLQSLRLDL 862 >A6DJ07.1 A6DJ07_9BACT Putative uncharacterized protein Length = 899 Score = 189 bits (481), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 223/950 (23%), Positives = 390/950 (41%), Gaps = 173/950 (18%) Query: 20 KLLIETGQYGEISSLKIKGDAFPTEYVMNKTVSPEQDTADHQWLGELLFTYRLDGGEWIK 79 + +IE + G I+SLK K D F TE++ P + LG + +YR +WI Sbjct: 8 EFIIEENE-GHITSLKRKNDPFETEFI-----RPGNN------LGCVNLSYR-HKADWIH 54 Query: 80 ASTNQSGDVRIIDKDGSKVTVTYENSANAGGIHHFKLVETYTMEADGSLQWDIHVANISG 139 D+ GS + +++G + L+W I ++N S Sbjct: 55 C-----------DQTGSDELTVSSSFSSSGPL----------------LEWTIKLSNTSH 87 Query: 140 KSLEFGDIGLPLPFNEQWTYG-DAIYETRVVTHSFVGGSGSYITAGRPSGIGSYLMLMPD 198 LE G + LP FNE++T +E RV HS + G S+I GIG++L++ P Sbjct: 88 SPLEIGTLELPFQFNEEYTRNPKESFEGRVFKHSHIAGHNSFIFWLPVGGIGAHLLMTPT 147 Query: 199 AVTGAGFEYQDRWRNEEHPGSKWAWNPDNEGKWIEGLNVF--YIHS--NVIKSTNRGYLP 254 T F ++ + G + G ++ +IHS +V T Sbjct: 148 ENTHLEF-FEAK-----------------NGIYASGGALYSAFIHSKAHVENLTGTWRQE 189 Query: 255 HTSLILAAGESKTYGFKLFAVANEQEAKDRLYQEGLIDVTVVPGMIVPINQKAKFDLRTK 314 ++S IL AGES +Y F+ N + + ++YQ G ID+ + PGM++P + K+K +R++ Sbjct: 190 NSSKILQAGESISYSFRFHWCDNYSDIRKKIYQSGGIDIRIAPGMVIPRDLKSKIAMRSQ 249 Query: 315 ADIHSVKLD--DGTDVPLLEQKSGDHHIYEFSLGKLGPQHVTVHYGSGLTTVLQFYGIDA 372 I ++ + + T++ L K G++ IYE + KLG +T+HYG T+L+F+ + Sbjct: 250 QKITRIQAEFPEETEISKLP-KHGENEIYEINFQKLGENKLTLHYGDQQETILEFFVSED 308 Query: 373 VDRALEDHATFMVEQTQWNLPGDIRDKVFDDWMMNTKSKRNNF-------------SGYW 419 ++ ++ A+F+ + Q P D ++ W + + SG Sbjct: 309 LETLIKKRASFIKDFQQHKDPTKWYDGLYSLWDAGAEEGQQKLGPDNPGSQHPYCVSG-- 366 Query: 420 GWGDDWGLTHGQFLAEKNALSPVASEITAVDEYLETAIWTNLMNGHHED---YLIH---- 472 DD + +L+EKN P A EI +++ ++E +W ED Y I+ Sbjct: 367 --SDDPSNSKCMYLSEKNVAYPDAEEIASLEYFIENFVWGKHQRTDQEDPYPYGIYGSDS 424 Query: 473 --------DFLMEEPNTTP--------TYRGYAYPHIYNTYFSMYKIASNYPELVAYKHP 516 + L++E + P +R + Y + Y++MY I P+L+ Y Sbjct: 425 WLTNRNSSNDLIKESTSRPQEGGSQCRMWRTFDYTTYFALYYNMYLIGKQNPDLINYI-T 483 Query: 517 KETYLLRAYNILKALYEGP--------------VSYNWETGLMGELTTPDIIQALEDEGY 562 + YL RAY KA +E P + + G E +I+ L EG Sbjct: 484 TDQYLERAYGTAKAYFEVPYNIMMTGGWAHEGWTDWAYTLGNFHEKYLLPLIETLRAEGL 543 Query: 563 VDEAN------DVRAKMLRXXXXXXXXXXXXGSEYSYDNTGEEAVYTLAKM--------- 607 D+A+ D + K SE D+T E+ Y + K Sbjct: 544 DDKADYLEGEWDKKVKFFLYDDDYPFV-----SEMPVDSTAYESSYAIGKYALTRKLKPD 598 Query: 608 ----QKDNSSE--------QAKALEMMGKINAKTRASRGQMP-VWYYYADPVTITGENWW 654 Q N+ + +AK + + + A RG + +Y+Y G + + Sbjct: 599 HHLWQHKNTGQWYSHPVIDEAKHKDYLHRQLMANLACRGVLENSYYHYGSDFRAVGTSNY 658 Query: 655 NFQYSVSLAGYAMDDWIRYHAAANREEEQRLSYAAKLANLSAINSGQISDD-------PA 707 Y + G+A+ D Y N+ + +L YA+ L + INSG + Sbjct: 659 TMSYMSQMGGWAIMDQGLYF-EENKFDLIQLGYASLLCSWGLINSGTKESNYGYWYPGKN 717 Query: 708 NYGAAAWTYQAEKXXXXXXXXXXXRNVPLLNGWKGMTGEADLGLFGALQILSADIAVDPI 767 N G+ AW + + + G + GE D GL ++ + + DP Sbjct: 718 NDGSVAWGFMPQMQGSEWNSACKD----MSRGAWAVCGEIDHGLTAGVEAAATIVVDDPN 773 Query: 768 FGVTGYGADVTVTDSVYYNITPTDGLFKRINLITEKL--YAELDKDQFTE---VRLSANK 822 FG YG ++ T + + P DG+ ++++ I++ L + L D F + + S Sbjct: 774 FGFIAYGGELDET-AQKLRVIPRDGVRRQLHYISKNLSFHLTLKSDGFKKDEPIVFSTEL 832 Query: 823 DYAKFSLRNLTPGYAHETTLTLNGLVKGAYLITIDGEPAGKLNAFGDEAK 872 + +F+L N + +H + + GL G Y + D + G+EA+ Sbjct: 833 NSLEFTLENRSKT-SHAIDIEVKGLKPGDYELYSDDQVITSFIVKGEEAQ 881 >Q5L7V1.1 Q5L7V1_BACFN Putative uncharacterized protein Length = 917 Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 209/919 (22%), Positives = 364/919 (39%), Gaps = 144/919 (15%) Query: 55 QDTADH-QWLGELLFTYRLDGGEWIKASTNQSGDVR--IIDKDGSKVTVTYENSANAGGI 111 ++ DH ++LG+L TY + G K+ D+ ++ K+ + ++ ++ Sbjct: 50 RNYVDHGKYLGDLSLTYEVRG----KSYAVSLADITPLVLSNTPDKIQIFWQLPSDV--- 102 Query: 112 HHFKLVETYTMEADGSLQWDIHVANISGKSLEFGDIGLPLPFNEQWTYGDAIYETRVVTH 171 +L +T+T++ + + W+I N S ++ D+ LP ++I + + Sbjct: 103 ---RLYQTFTIKGE-EVDWEIDFFNRSHHPVKVTDMWFALPVG---ALDESIQAHQNLNR 155 Query: 172 SF-VGGSGSYITAGRPSGIGSYLMLMPDAVTGAGFEYQDRWRNEEHPGSKWAWNPDNEGK 230 F + G+ S+ +G G L++ T + QD GK Sbjct: 156 HFSLNGNASFFYWTPLTGQGDILLMTMHKGTAIEYATQD-------------------GK 196 Query: 231 WIEGLNVFYIHS-NVIKSTNRGY-LPHTSLILAAGESKTYGFKLFAVANEQEAKDRLYQE 288 +Y+HS N + TN + LP TS + E GF N +E K ++Y + Sbjct: 197 -------YYLHSMNAVDRTNDSWRLPSTSKNVQPYEHYMTGFNFTLTGNHEEVKTKIYDK 249 Query: 289 GLIDVTVVPGMIVPINQKAKFDLRTKADIHSVKLDDGTDVPL--LEQKSGDHHIYEFSLG 346 + V V PGM+V + L++K + + + ++ + L QK GD +IY+F Sbjct: 250 HGVVVKVAPGMVVTPEFEVYCALQSKLPVAELVAEYPEEIQITSLGQKEGDKYIYKFRFS 309 Query: 347 KLGPQHVTVHYGSGLTTVLQFYGIDAVDRALEDHATFMVEQTQWNLPGDIRDKVFDDWMM 406 +LG +TVHYG L L F+ + ++ ++ A F+V++ Q + ++ W M Sbjct: 310 RLGENLITVHYGDDLICFLDFFVTEPLETLIKKRARFIVDKQQHRDSSKWYNGLYSLWDM 369 Query: 407 NTKS---------KRNNFSGYWGWGDDWGLTHGQFLAEKNALSPVASEITAVDEYLETAI 457 R F G DD + +++EKN + P EI +++ Y E + Sbjct: 370 EKSELLSPDHLGDLREEFMV--GGSDDPSNSKPVYVSEKNVIYPNKEEIASLEYYEENFV 427 Query: 458 WTNLMNGHHE---DYLIHDFLMEEPNTTPTYRGYA--------------YPHIYNTYFSM 500 W L E Y I+ N + Y GY Y + Y+++ Sbjct: 428 WGKLQRTDEEYPYPYGIYGSENWYQNRSGKYGGYEDGGSGKGRMWRTFDYTTHFAIYYNL 487 Query: 501 YKIASNYPELVAYKHPKETYLLRAYNILKALYEGPVS--------------YNWETGLMG 546 Y+IA + PE+V+Y + YL RAY A +E P + + ++ G Sbjct: 488 YRIAEDNPEMVSYLD-ADGYLERAYRTAMAYFEVPYNILMGKQWAFHGWTDWAYKQGNFH 546 Query: 547 ELTTPDIIQALEDEGYVDEANDVRAKMLRXXXXXXXXXX-XXGSEYSYDNTGEEAVYTLA 605 E DII AL+ +G + +A +R + + GSE D T E+ Y +A Sbjct: 547 ERYLLDIINALQQKGRLKDAAKLRREWEKKVTYMVYEDPWPFGSEMFVDRTAFESSYYVA 606 Query: 606 KMQKDN---------------------SSEQAKALEMMGKINAKTRASRGQMPVWYYYAD 644 + K N S + + M A RG YA+ Sbjct: 607 EYAKLNPIKPEEQFWYDKNRKKWYSYTSFDTSMIDRFMQNQLDGNLALRGLFEPG--YAN 664 Query: 645 PVTITGENWWNFQYSVSLAGYAMDDWIRYHAAANREEEQRLSYAAKLANLSAINSGQISD 704 T + N Y + G A+ D+ Y + + Y + LA+ + +N+G Sbjct: 665 LGTAWSGQYVNLDYMTQMGGVALLDYA-YRFSDRPDRYINYGYNSLLASWALMNTGTKKT 723 Query: 705 D-------PANYGAAAWTYQAEKXXXXXXXXXXXRNVPLLNGWKGMTGEADLGLFGALQI 757 D N GA W + + P W+ GE D GL G + Sbjct: 724 DFGYWYRGEQNDGAVGWAFSPYQNSRTYMNYIKVGRAP----WR-FDGEIDHGLTGGIHG 778 Query: 758 LSADIAVDPIFGVTGYGADVTVTDSVYYNITPTDGLFKRINLITE-KLYAELDKDQFTE- 815 + DP FG+ GYG +V + +I P DG+ +++ ++T + EL +D F + Sbjct: 779 SGVYLLDDPDFGLIGYGGNVRMDKDGTVSIIPFDGVRRQVRIMTPVRFSVELMQDGFRKD 838 Query: 816 --VRLSANKDYAKFSLRNLTPGYAHETTLTLNGLVKGAYLITIDGEPAGKLNAFGDEAKL 873 + L ++ + F + N + H TT+ G+ +G Y + D + N Sbjct: 839 YPITLRGTEELS-FCIENRSDK-PHNTTIRAEGMPEGKYTVMTDHKMITTFN-------- 888 Query: 874 TIEAGPA-VAYTVELSATE 891 IEAG A Y +E+ T+ Sbjct: 889 -IEAGNAHHPYYIEVPVTD 906 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.133 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 6,240,895,738 Number of extensions: 277047839 Number of successful extensions: 448433 Number of sequences better than 1.0e-05: 40 Number of HSP's gapped: 448382 Number of HSP's successfully gapped: 50 Length of query: 1015 Length of database: 3,060,696,203 Length adjustment: 146 Effective length of query: 869 Effective length of database: 1,685,228,013 Effective search space: 1464463143297 Effective search space used: 1464463143297 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 137 (57.4 bits)