BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0346.0003.p
         (208 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

C4L1W3.1 C4L1W3_EXISA Putative uncharacterized protein                183   8e-45
B1YFY9.1 B1YFY9_EXIS2 Putative uncharacterized protein                177   7e-43

>C4L1W3.1 C4L1W3_EXISA Putative uncharacterized protein
          Length = 212

 Score =  183 bits (464), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 87/181 (48%), Positives = 120/181 (66%), Gaps = 2/181 (1%)

Query: 13  DAVLYPEGYVADTGSVQTLRSLAGQYRKLMITSYKNDNGQDRALVIGPDGEIVLERPKSP 72
           D +LYPEGY     ++  L  +A Q+   ++  Y++D  +DR L++  +GE++L R K+P
Sbjct: 28  DLILYPEGYCT-YRALDELSDVAIQFNTTIVLGYRDDTNRDRVLIVNKNGEMLLTRRKTP 86

Query: 73  MQGELYAPSVVAAGAIRMGYLLCVEILQGLNGLEGHAGTLDFIAHPIGVGMFSEEQFALW 132
               L+ PS    GA   GYLLC EI  G  GL+GH   L  I +PIGVGMFSEEQF  W
Sbjct: 87  ENEGLFMPSSATDGAEEYGYLLCREIFMGNEGLKGHEH-LTIIFNPIGVGMFSEEQFTEW 145

Query: 133 TEEAARIAVKYQCPIIGTSHADGSYRNCGVSIPISYCITANGQPLYISHADTRSRIVDLK 192
           TE A +IA++ +  IIGTSHADGSYRNCG+SIPI+YC   NG+ +++S  DTR+R+++  
Sbjct: 146 TEAARKIAMERKAMIIGTSHADGSYRNCGISIPIAYCFDENGEEVFLSKNDTRTRVLETD 205

Query: 193 S 193
           S
Sbjct: 206 S 206


>B1YFY9.1 B1YFY9_EXIS2 Putative uncharacterized protein
          Length = 220

 Score =  177 bits (448), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 88/186 (47%), Positives = 121/186 (65%), Gaps = 3/186 (1%)

Query: 13  DAVLYPEGYVADTGSVQTLRSLAGQYRKLMITSYKNDNGQDRALVIGPDGEIVLERPKSP 72
           D +LYPEGY  +T  V TLR LA QY  +++T Y++ +  DRAL+I   G+I+L+R K+P
Sbjct: 28  DLLLYPEGYCRET-DVATLRQLAKQYATIIVTGYRDADRLDRALIINTAGDILLDRAKTP 86

Query: 73  MQGELYAPSVVAAGAIRMGYLLCVEILQGLNGLEGHAGTLDFIAHPIGVGMFSEEQFALW 132
             G LY PS         GYLLC EI  GL+GL+     +D I +PIGVGMFSEEQ+  W
Sbjct: 87  EAGPLYTPSTAIVAGQSAGYLLCREIFLGLDGLKND--NIDIIFNPIGVGMFSEEQYTDW 144

Query: 133 TEEAARIAVKYQCPIIGTSHADGSYRNCGVSIPISYCITANGQPLYISHADTRSRIVDLK 192
           + E+ +I+ +     IGTSHADGSYRNCG SIP ++   A G+ +++S  D ++RI+D  
Sbjct: 145 SGESQKISHQQSALFIGTSHADGSYRNCGFSIPTAFAFDATGEAIFLSKDDPQTRILDTV 204

Query: 193 SGTVAI 198
           + TV I
Sbjct: 205 TKTVEI 210


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.319    0.136    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,303,462,382
Number of extensions: 54033007
Number of successful extensions: 108380
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 108378
Number of HSP's successfully gapped: 2
Length of query: 208
Length of database: 3,060,696,203
Length adjustment: 130
Effective length of query: 78
Effective length of database: 1,835,964,253
Effective search space: 143205211734
Effective search space used: 143205211734
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 128 (53.9 bits)